RNA–Protein interactions for RNA: YBR280C

SAF1, Transcript of F-Box protein involved in proteasome-dependent degradation of Aah1p, yeastyeast

Gene SAF1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SAF1YBR280C ROT2P38138 954 aa3.98□□□□□ -1.77
SAF1YBR280C AIM3P38266 947 aaKnown RBP3.98□□□□□ -1.77
SAF1YBR280C MNN9P39107 395 aaKnown RBP3.98□□□□□ -1.77
SAF1YBR280C YIL029CP40538 142 aa3.98□□□□□ -1.77
SAF1YBR280C YIR020CP40575 100 aa3.98□□□□□ -1.77
SAF1YBR280C MID1P41821 548 aa3.98□□□□□ -1.77
SAF1YBR280C CAK1P43568 368 aaPredicted RBP3.98□□□□□ -1.77
SAF1YBR280C SIP18P50263 79 aa3.98□□□□□ -1.77
SAF1YBR280C SHE4P51534 789 aa3.98□□□□□ -1.77
SAF1YBR280C DUG3P53871 357 aa3.98□□□□□ -1.77
SAF1YBR280C CRZ1P53968 678 aa3.98□□□□□ -1.77
SAF1YBR280C RPL15BP54780 204 aaPredicted RBP3.98□□□□□ -1.77
SAF1YBR280C RPL6AQ02326 176 aaKnown RBP3.98□□□□□ -1.77
SAF1YBR280C SSY1Q03770 852 aa3.98□□□□□ -1.77
SAF1YBR280C ATG38Q05789 226 aaKnown RBP3.98□□□□□ -1.77
SAF1YBR280C YTH1Q06102 208 aaPredicted RBP3.98□□□□□ -1.77
SAF1YBR280C CRT10Q08226 957 aa3.98□□□□□ -1.77
SAF1YBR280C SRL2Q12020 392 aa3.98□□□□□ -1.77
SAF1YBR280C ATP2P00830 511 aaKnown RBP3.97□□□□□ -1.77
SAF1YBR280C PPG1P32838 368 aa3.97□□□□□ -1.77
SAF1YBR280C SLC1P33333 303 aa3.97□□□□□ -1.77
SAF1YBR280C YKL107WP34251 309 aa3.97□□□□□ -1.77
SAF1YBR280C RRP4P38792 359 aaKnown RBP3.97□□□□□ -1.77
SAF1YBR280C YER084WP40057 128 aa3.97□□□□□ -1.77
SAF1YBR280C YJR142WP47173 342 aa3.97□□□□□ -1.77
SAF1YBR280C SBH2P52871 88 aa3.97□□□□□ -1.77
SAF1YBR280C SCS7Q03529 384 aa3.97□□□□□ -1.77
SAF1YBR280C MSA1Q08471 629 aa3.97□□□□□ -1.77
SAF1YBR280C NIP7Q08962 181 aaKnown RBP3.97□□□□□ -1.77
SAF1YBR280C RTC5Q12108 567 aaKnown RBP3.97□□□□□ -1.77
SAF1YBR280C RNH203Q12338 110 aa3.97□□□□□ -1.77
SAF1YBR280C REP1P03871 373 aa3.97□□□□□ -1.77
SAF1YBR280C NUP1P20676 1076 aa3.97□□□□□ -1.77
SAF1YBR280C DBF2P22204 572 aa3.97□□□□□ -1.77
SAF1YBR280C HSP30P25619 332 aa3.97□□□□□ -1.77
SAF1YBR280C YHR097CP38809 366 aaKnown RBP3.97□□□□□ -1.77
SAF1YBR280C YHR219WP38900 624 aa3.97□□□□□ -1.77
SAF1YBR280C YER188WP40103 239 aa3.97□□□□□ -1.77
SAF1YBR280C PIG2P40187 538 aa3.97□□□□□ -1.77
SAF1YBR280C MET28P40573 187 aa3.97□□□□□ -1.77
SAF1YBR280C EGT2P42835 1041 aa3.97□□□□□ -1.77
SAF1YBR280C CCT7P42943 550 aaKnown RBP3.97□□□□□ -1.77
SAF1YBR280C NCA3P46955 337 aa3.97□□□□□ -1.77
SAF1YBR280C ARC35P53731 342 aaKnown RBP3.97□□□□□ -1.77
SAF1YBR280C YNL181WP53878 407 aa3.97□□□□□ -1.77
SAF1YBR280C SED1Q01589 338 aa3.97□□□□□ -1.77
SAF1YBR280C CIK1Q01649 594 aa3.97□□□□□ -1.77
SAF1YBR280C MMT1Q03218 510 aa3.97□□□□□ -1.77
SAF1YBR280C UTP21Q06078 939 aaPredicted RBP3.97□□□□□ -1.77
SAF1YBR280C RLM1Q12224 676 aa3.97□□□□□ -1.77
SAF1YBR280C RTR2Q12378 196 aa3.97□□□□□ -1.77
SAF1YBR280C DFG16Q99234 619 aa3.97□□□□□ -1.77
SAF1YBR280C PEP4P07267 405 aaKnown RBP3.96□□□□□ -1.78
SAF1YBR280C RPP1BP10622 106 aaKnown RBP3.96□□□□□ -1.78
SAF1YBR280C EXG1P23776 448 aaKnown RBP3.96□□□□□ -1.78
SAF1YBR280C GFD2P25370 566 aaKnown RBP3.96□□□□□ -1.78
SAF1YBR280C DEP1P31385 405 aa3.96□□□□□ -1.78
SAF1YBR280C MDL1P33310 695 aa3.96□□□□□ -1.78
SAF1YBR280C KRE29P40026 464 aa3.96□□□□□ -1.78
SAF1YBR280C SFH1Q06168 426 aa3.96□□□□□ -1.78
SAF1YBR280C YPR147CQ06522 304 aaKnown RBP3.96□□□□□ -1.78
SAF1YBR280C NTG2Q08214 380 aa3.96□□□□□ -1.78
SAF1YBR280C YPL191CQ08930 360 aa3.96□□□□□ -1.78
SAF1YBR280C RDL1Q12305 139 aaKnown RBP3.96□□□□□ -1.78
SAF1YBR280C YOR343CQ12484 108 aa3.96□□□□□ -1.78
SAF1YBR280C SEC12P11655 471 aa3.95□□□□□ -1.78
SAF1YBR280C TOP3P13099 656 aa3.95□□□□□ -1.78
SAF1YBR280C RPB8P20436 146 aa3.95□□□□□ -1.78
SAF1YBR280C MCM10P32354 571 aa3.95□□□□□ -1.78
SAF1YBR280C SAC1P32368 623 aaKnown RBP3.95□□□□□ -1.78
SAF1YBR280C PUB1P32588 453 aaKnown RBP RIP-Chip data3.95□□□□□ -1.78not detected
SAF1YBR280C YER121WP40076 114 aa3.95□□□□□ -1.78
SAF1YBR280C RLP7P40693 322 aaKnown RBP3.95□□□□□ -1.78
SAF1YBR280C YGR201CP42936 225 aa3.95□□□□□ -1.78
SAF1YBR280C SYF2P53277 215 aaPredicted RBP3.95□□□□□ -1.78
SAF1YBR280C MTM1P53320 366 aa3.95□□□□□ -1.78
SAF1YBR280C RVB1Q03940 463 aaKnown RBP3.95□□□□□ -1.78
SAF1YBR280C RAD33Q04231 177 aa3.95□□□□□ -1.78
SAF1YBR280C SPO77Q06134 477 aa3.95□□□□□ -1.78
SAF1YBR280C YER145C-AA0A023PYF4 145 aa3.95□□□□□ -1.78
SAF1YBR280C SUI3P09064 285 aaKnown RBP3.95□□□□□ -1.78
SAF1YBR280C YPK2P18961 677 aa3.95□□□□□ -1.78
SAF1YBR280C GIT1P25346 518 aa3.95□□□□□ -1.78
SAF1YBR280C PUP2P32379 260 aa3.95□□□□□ -1.78
SAF1YBR280C MRE11P32829 692 aa3.95□□□□□ -1.78
SAF1YBR280C VHR1P40522 640 aa3.95□□□□□ -1.78
SAF1YBR280C IMA5P40884 581 aa3.95□□□□□ -1.78
SAF1YBR280C COQ10Q08058 207 aa3.95□□□□□ -1.78
SAF1YBR280C YDL176WQ12027 708 aa3.95□□□□□ -1.78
SAF1YBR280C RTN2Q12443 393 aa3.95□□□□□ -1.78
SAF1YBR280C YHR214C-EQ8TGK0 99 aa3.95□□□□□ -1.78
SAF1YBR280C YPT6Q99260 215 aa3.95□□□□□ -1.78
SAF1YBR280C THP2O13539 261 aaKnown RBP3.94□□□□□ -1.78
SAF1YBR280C TPK2P06245 380 aa3.94□□□□□ -1.78
SAF1YBR280C RPS16AP0CX51 143 aaKnown RBP3.94□□□□□ -1.78
SAF1YBR280C RPS16BP0CX52 143 aaKnown RBP3.94□□□□□ -1.78
SAF1YBR280C TIM12P32830 109 aa3.94□□□□□ -1.78
SAF1YBR280C MNS1P32906 549 aa3.94□□□□□ -1.78
SAF1YBR280C MTW1P39731 289 aa3.94□□□□□ -1.78
SAF1YBR280C TDA10P42938 290 aa3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms