RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	TMX4	Q9H1E5	349 aa	Predicted RBP	15.7	■□□□□ 0.1
SMTN-223	ENST00000619644	BZW2	Q9Y6E2	419 aa	Known RBP	15.7	■□□□□ 0.1
SMTN-223	ENST00000619644	DDX39A	O00148	427 aa	Known RBP	15.7	■□□□□ 0.1
SMTN-223	ENST00000619644	MEIS2	O14770	477 aa		15.7	■□□□□ 0.1
SMTN-223	ENST00000619644	HOXD13	P35453	343 aa		15.7	■□□□□ 0.1
SMTN-223	ENST00000619644	SATB1	Q01826	763 aa		15.7	■□□□□ 0.1
SMTN-223	ENST00000619644	SYCP3	Q8IZU3	236 aa		15.7	■□□□□ 0.1
SMTN-223	ENST00000619644	ATF5	Q9Y2D1	282 aa	Predicted RBP	15.7	■□□□□ 0.1
SMTN-223	ENST00000619644	UTP11	Q9Y3A2	253 aa	Known RBP	15.7	■□□□□ 0.1
SMTN-223	ENST00000619644	IGKV6D-41	A0A0C4DH26	115 aa		15.7	■□□□□ 0.1
SMTN-223	ENST00000619644	DDX3X	O00571	662 aa	Known RBP eCLIP	15.7	■□□□□ 0.1
SMTN-223	ENST00000619644	SPATA31C1	P0DKV0	1188 aa		15.7	■□□□□ 0.1
SMTN-223	ENST00000619644	GYS1	P13807	737 aa		15.7	■□□□□ 0.1
SMTN-223	ENST00000619644	MKRN4P	Q13434	485 aa	Predicted RBP	15.7	■□□□□ 0.1
SMTN-223	ENST00000619644	LRIG3	Q6UXM1	1119 aa		15.7	■□□□□ 0.1
SMTN-223	ENST00000619644	SYT2	Q8N9I0	419 aa	Predicted RBP	15.7	■□□□□ 0.1
SMTN-223	ENST00000619644	C3orf20	Q8ND61	904 aa		15.7	■□□□□ 0.1
SMTN-223	ENST00000619644	CCDC26	Q8TAB7	109 aa		15.7	■□□□□ 0.1
SMTN-223	ENST00000619644	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	15.7	■□□□□ 0.1
SMTN-223	ENST00000619644		F5H6K3	240 aa		15.69	■□□□□ 0.1
SMTN-223	ENST00000619644	EML1	O00423	815 aa		15.69	■□□□□ 0.1
SMTN-223	ENST00000619644	NEBL	O76041	1014 aa		15.69	■□□□□ 0.1
SMTN-223	ENST00000619644	KLRC3	Q07444	240 aa		15.69	■□□□□ 0.1
SMTN-223	ENST00000619644	BYSL	Q13895	437 aa	Known RBP	15.69	■□□□□ 0.1
SMTN-223	ENST00000619644	CRYM	Q14894	314 aa		15.69	■□□□□ 0.1
SMTN-223	ENST00000619644	CACNA2D3	Q8IZS8	1091 aa		15.69	■□□□□ 0.1
SMTN-223	ENST00000619644	MAGEC3	Q8TD91	643 aa		15.69	■□□□□ 0.1
SMTN-223	ENST00000619644	EIF2AK1	Q9BQI3	630 aa	Known RBP	15.69	■□□□□ 0.1
SMTN-223	ENST00000619644	CCDC113	Q9H0I3	377 aa		15.69	■□□□□ 0.1
SMTN-223	ENST00000619644	TYW1	Q9NV66	732 aa	Known RBP	15.69	■□□□□ 0.1
SMTN-223	ENST00000619644	MYH4	Q9Y623	1939 aa		15.69	■□□□□ 0.1
SMTN-223	ENST00000619644	DDTL	A6NHG4	134 aa	Predicted RBP	15.69	■□□□□ 0.1
SMTN-223	ENST00000619644	MSH4	O15457	936 aa		15.69	■□□□□ 0.1
SMTN-223	ENST00000619644	RPA1	P27694	616 aa		15.69	■□□□□ 0.1
SMTN-223	ENST00000619644	MAGOH	P61326	146 aa	Known RBP	15.69	■□□□□ 0.1
SMTN-223	ENST00000619644	ZYX	Q15942	572 aa	Known RBP	15.69	■□□□□ 0.1
SMTN-223	ENST00000619644	UAP1	Q16222	522 aa	Predicted RBP	15.69	■□□□□ 0.1
SMTN-223	ENST00000619644	HYI	Q5T013	277 aa		15.69	■□□□□ 0.1
SMTN-223	ENST00000619644	SLC35C1	Q96A29	364 aa		15.69	■□□□□ 0.1
SMTN-223	ENST00000619644	MAGOHB	Q96A72	148 aa	Known RBP	15.69	■□□□□ 0.1
SMTN-223	ENST00000619644	TMOD4	Q9NZQ9	345 aa		15.69	■□□□□ 0.1
SMTN-223	ENST00000619644	USP21	Q9UK80	565 aa		15.69	■□□□□ 0.1
SMTN-223	ENST00000619644	DNAJC12	Q9UKB3	198 aa		15.69	■□□□□ 0.1
SMTN-223	ENST00000619644		H0YGN5	161 aa		15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	BUB1B	O60566	1050 aa	Predicted RBP	15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	POLD1	P28340	1107 aa		15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	ZNF844	Q08AG5	666 aa		15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	DRAP1	Q14919	205 aa	Predicted RBP	15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	EPHA7	Q15375	998 aa		15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	CCDC174	Q6PII3	467 aa		15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	C15orf52	Q6ZUT6	534 aa	Known RBP	15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	KIRREL3	Q8IZU9	778 aa		15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	SLC35G2	Q8TBE7	412 aa		15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	ATP6V0A4	Q9HBG4	840 aa		15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	CNOT8	Q9UFF9	292 aa	Known RBP	15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	NR2E1	Q9Y466	385 aa		15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	NFS1	Q9Y697	457 aa		15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	PITPNM2	Q9BZ72	1349 aa		15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	PDXK	O00764	312 aa		15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	TNFAIP3	P21580	790 aa		15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	NOV	P48745	357 aa		15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	MARS	P56192	900 aa	Known RBP	15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	CUL1	Q13616	776 aa		15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	C10orf76	Q5T2E6	689 aa		15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	METTL14	Q9HCE5	456 aa	Known RBP	15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	ASTN1	O14525	1302 aa		15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	COL5A3	P25940	1745 aa	Predicted RBP	15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	DCDC2C	A8MYV0	355 aa		15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	RPSA	P08865	295 aa	Known RBP	15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	ECHS1	P30084	290 aa		15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	SLC8A1	P32418	973 aa		15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	CRK	P46108	304 aa		15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	XRCC4	Q13426	336 aa		15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	ETNPPL	Q8TBG4	499 aa		15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	RAPGEF5	Q92565	580 aa		15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	GLG1	Q92896	1179 aa		15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	DYDC2	Q96IM9	177 aa		15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	SELENOS	Q9BQE4	189 aa		15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	COA1	Q9GZY4	146 aa		15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	PCIF1	Q9H4Z3	704 aa		15.68	■□□□□ 0.1
SMTN-223	ENST00000619644	TRAF3IP3	Q9Y228	551 aa		15.68	■□□□□ 0.1
SMTN-223	ENST00000619644		A0A1B0GUA9	196 aa		15.67	■□□□□ 0.1
SMTN-223	ENST00000619644	PLTP	P55058	493 aa		15.67	■□□□□ 0.1
SMTN-223	ENST00000619644	AADACL2	Q6P093	401 aa		15.67	■□□□□ 0.1
SMTN-223	ENST00000619644	TLDC1	Q6P9B6	456 aa		15.67	■□□□□ 0.1
SMTN-223	ENST00000619644	ARHGAP27	Q6ZUM4	889 aa		15.67	■□□□□ 0.1
SMTN-223	ENST00000619644	HS2ST1	Q7LGA3	356 aa		15.67	■□□□□ 0.1
SMTN-223	ENST00000619644	SYCE1	Q8N0S2	351 aa		15.67	■□□□□ 0.1
SMTN-223	ENST00000619644	LRRC57	Q8N9N7	239 aa		15.67	■□□□□ 0.1
SMTN-223	ENST00000619644	SH2D3A	Q9BRG2	576 aa		15.67	■□□□□ 0.1
SMTN-223	ENST00000619644	GLT8D2	Q9H1C3	349 aa		15.67	■□□□□ 0.1
SMTN-223	ENST00000619644	DNAJC18	Q9H819	358 aa		15.67	■□□□□ 0.1
SMTN-223	ENST00000619644	SLC24A3	Q9HC58	644 aa		15.67	■□□□□ 0.1
SMTN-223	ENST00000619644	ZBTB21	Q9ULJ3	1066 aa		15.67	■□□□□ 0.1
SMTN-223	ENST00000619644	PPP1R9A	Q9ULJ8	1098 aa		15.67	■□□□□ 0.1
SMTN-223	ENST00000619644	C5orf60	A6NFR6	353 aa		15.67	■□□□□ 0.1
SMTN-223	ENST00000619644	EXOC3	O60645	756 aa		15.67	■□□□□ 0.1
SMTN-223	ENST00000619644	PPP2R2A	P63151	447 aa		15.67	■□□□□ 0.1
SMTN-223	ENST00000619644	LACTB2	Q53H82	288 aa	Predicted RBP	15.67	■□□□□ 0.1
SMTN-223	ENST00000619644	LRCH2	Q5VUJ6	765 aa		15.67	■□□□□ 0.1

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms