RNA–Protein interactions for RNA: ENST00000592621.5

RANBP3-228, Transcript of RAN binding protein 3, human

TSL 5

Gene RANBP3, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RANBP3-228	ENST00000592621	KARS	Q15046	597 aa	Known RBP	13	□□□□□ -0.33
RANBP3-228	ENST00000592621	LRIT3	Q3SXY7	679 aa		13	□□□□□ -0.33
RANBP3-228	ENST00000592621	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13	□□□□□ -0.33
RANBP3-228	ENST00000592621	KSR1	Q8IVT5	923 aa		13	□□□□□ -0.33
RANBP3-228	ENST00000592621	KCNG4	Q8TDN1	519 aa		13	□□□□□ -0.33
RANBP3-228	ENST00000592621	TCP11	Q8WWU5	503 aa		13	□□□□□ -0.33
RANBP3-228	ENST00000592621	SYMPK	Q92797	1274 aa	Known RBP	13	□□□□□ -0.33
RANBP3-228	ENST00000592621	APBB2	Q92870	758 aa		13	□□□□□ -0.33
RANBP3-228	ENST00000592621	RNPC3	Q96LT9	517 aa	Known RBP	13	□□□□□ -0.33
RANBP3-228	ENST00000592621	PPP1R16B	Q96T49	567 aa		13	□□□□□ -0.33
RANBP3-228	ENST00000592621	OSMR	Q99650	979 aa		13	□□□□□ -0.33
RANBP3-228	ENST00000592621	IFIH1	Q9BYX4	1025 aa	Known RBP	13	□□□□□ -0.33
RANBP3-228	ENST00000592621	ATP6V0A4	Q9HBG4	840 aa		13	□□□□□ -0.33
RANBP3-228	ENST00000592621	TSHZ2	Q9NRE2	1034 aa		13	□□□□□ -0.33
RANBP3-228	ENST00000592621	BLOC1S4	Q9NUP1	217 aa		13	□□□□□ -0.33
RANBP3-228	ENST00000592621	DNM3	Q9UQ16	869 aa		13	□□□□□ -0.33
RANBP3-228	ENST00000592621	NOC2L	Q9Y3T9	749 aa	Known RBP	13	□□□□□ -0.33
RANBP3-228	ENST00000592621	ARHGEF35	A5YM69	484 aa		12.99	□□□□□ -0.33
RANBP3-228	ENST00000592621	ACTN1	P12814	892 aa		12.99	□□□□□ -0.33
RANBP3-228	ENST00000592621	CYP11B2	P19099	503 aa		12.99	□□□□□ -0.33
RANBP3-228	ENST00000592621	EIF4B	P23588	611 aa	Known RBP	12.99	□□□□□ -0.33
RANBP3-228	ENST00000592621	CD52	P31358	61 aa		12.99	□□□□□ -0.33
RANBP3-228	ENST00000592621	SLC12A3	P55017	1021 aa		12.99	□□□□□ -0.33
RANBP3-228	ENST00000592621	CDC42EP1	Q00587	391 aa		12.99	□□□□□ -0.33
RANBP3-228	ENST00000592621	LAMTOR4	Q0VGL1	99 aa		12.99	□□□□□ -0.33
RANBP3-228	ENST00000592621	HABP4	Q5JVS0	413 aa	Known RBP	12.99	□□□□□ -0.33
RANBP3-228	ENST00000592621	PADI6	Q6TGC4	694 aa		12.99	□□□□□ -0.33
RANBP3-228	ENST00000592621	ZNF410	Q86VK4	478 aa		12.99	□□□□□ -0.33
RANBP3-228	ENST00000592621	FAM228A	Q86W67	206 aa		12.99	□□□□□ -0.33
RANBP3-228	ENST00000592621	RHPN2	Q8IUC4	686 aa		12.99	□□□□□ -0.33
RANBP3-228	ENST00000592621	SYT2	Q8N9I0	419 aa	Predicted RBP	12.99	□□□□□ -0.33
RANBP3-228	ENST00000592621	PRPF31	Q8WWY3	499 aa	Known RBP	12.99	□□□□□ -0.33
RANBP3-228	ENST00000592621	PSPC1	Q8WXF1	523 aa	Known RBP	12.99	□□□□□ -0.33
RANBP3-228	ENST00000592621	SEPT8	Q92599	483 aa		12.99	□□□□□ -0.33
RANBP3-228	ENST00000592621	ZNF668	Q96K58	619 aa	Predicted RBP	12.99	□□□□□ -0.33
RANBP3-228	ENST00000592621	PLIN2	Q99541	437 aa		12.99	□□□□□ -0.33
RANBP3-228	ENST00000592621	IFT122	Q9HBG6	1241 aa		12.99	□□□□□ -0.33
RANBP3-228	ENST00000592621	ERVK-5	Q9HDB9	667 aa		12.99	□□□□□ -0.33
RANBP3-228	ENST00000592621	GPRC5C	Q9NQ84	441 aa		12.99	□□□□□ -0.33
RANBP3-228	ENST00000592621	PADI3	Q9ULW8	664 aa		12.99	□□□□□ -0.33
RANBP3-228	ENST00000592621	PCDHA7	Q9UN72	937 aa		12.99	□□□□□ -0.33
RANBP3-228	ENST00000592621	GINS2	Q9Y248	185 aa		12.99	□□□□□ -0.33
RANBP3-228	ENST00000592621	ATP6V1D	Q9Y5K8	247 aa		12.99	□□□□□ -0.33
RANBP3-228	ENST00000592621	COL4A3BP	Q9Y5P4	624 aa		12.99	□□□□□ -0.33
RANBP3-228	ENST00000592621	LOXHD1	Q8IVV2	1947 aa		12.99	□□□□□ -0.33
RANBP3-228	ENST00000592621		A0A087WZ62	844 aa		12.98	□□□□□ -0.33
RANBP3-228	ENST00000592621		A0A087X0B3	334 aa		12.98	□□□□□ -0.33
RANBP3-228	ENST00000592621	ABHD14A-ACY1	A0A1B0GW23	586 aa		12.98	□□□□□ -0.33
RANBP3-228	ENST00000592621	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	12.98	□□□□□ -0.33
RANBP3-228	ENST00000592621	ASAP2	O43150	1006 aa		12.98	□□□□□ -0.33
RANBP3-228	ENST00000592621	CUTA	O60888	179 aa		12.98	□□□□□ -0.33
RANBP3-228	ENST00000592621	DARS	P14868	501 aa	Known RBP	12.98	□□□□□ -0.33
RANBP3-228	ENST00000592621	PLCG1	P19174	1290 aa		12.98	□□□□□ -0.33
RANBP3-228	ENST00000592621	GLRA2	P23416	452 aa		12.98	□□□□□ -0.33
RANBP3-228	ENST00000592621	WDR5	P61964	334 aa	Known RBP	12.98	□□□□□ -0.33
RANBP3-228	ENST00000592621	KRT85	P78386	507 aa		12.98	□□□□□ -0.33
RANBP3-228	ENST00000592621	IKBKE	Q14164	716 aa		12.98	□□□□□ -0.33
RANBP3-228	ENST00000592621	ZRSR1	Q15695	479 aa	Known RBP	12.98	□□□□□ -0.33
RANBP3-228	ENST00000592621	NAALADL2	Q58DX5	795 aa		12.98	□□□□□ -0.33
RANBP3-228	ENST00000592621	FAM109B	Q6ICB4	259 aa	Predicted RBP	12.98	□□□□□ -0.33
RANBP3-228	ENST00000592621	RINT1	Q6NUQ1	792 aa		12.98	□□□□□ -0.33
RANBP3-228	ENST00000592621	SHC4	Q6S5L8	630 aa		12.98	□□□□□ -0.33
RANBP3-228	ENST00000592621	C1orf186	Q6ZWK4	172 aa		12.98	□□□□□ -0.33
RANBP3-228	ENST00000592621	IFNLR1	Q8IU57	520 aa	Predicted RBP	12.98	□□□□□ -0.33
RANBP3-228	ENST00000592621	MCPH1	Q8NEM0	835 aa		12.98	□□□□□ -0.33
RANBP3-228	ENST00000592621	ASAP3	Q8TDY4	903 aa		12.98	□□□□□ -0.33
RANBP3-228	ENST00000592621	LEO1	Q8WVC0	666 aa	Predicted RBP	12.98	□□□□□ -0.33
RANBP3-228	ENST00000592621	NLRP7	Q8WX94	980 aa		12.98	□□□□□ -0.33
RANBP3-228	ENST00000592621	LINC01599	Q8WXQ3	324 aa		12.98	□□□□□ -0.33
RANBP3-228	ENST00000592621	CALML4	Q96GE6	196 aa		12.98	□□□□□ -0.33
RANBP3-228	ENST00000592621	CDK5RAP3	Q96JB5	506 aa		12.98	□□□□□ -0.33
RANBP3-228	ENST00000592621	CCDC43	Q96MW1	224 aa	Known RBP	12.98	□□□□□ -0.33
RANBP3-228	ENST00000592621	FDXACB1	Q9BRP7	624 aa	Predicted RBP	12.98	□□□□□ -0.33
RANBP3-228	ENST00000592621	RUSC1	Q9BVN2	902 aa		12.98	□□□□□ -0.33
RANBP3-228	ENST00000592621	TMX1	Q9H3N1	280 aa		12.98	□□□□□ -0.33
RANBP3-228	ENST00000592621	CIZ1	Q9ULV3	898 aa	Predicted RBP	12.98	□□□□□ -0.33
RANBP3-228	ENST00000592621	RBM19	Q9Y4C8	960 aa	Known RBP	12.98	□□□□□ -0.33
RANBP3-228	ENST00000592621	PTPRS	Q13332	1948 aa		12.98	□□□□□ -0.33
RANBP3-228	ENST00000592621	EFCAB14	O75071	495 aa		12.97	□□□□□ -0.33
RANBP3-228	ENST00000592621	RPS6KA5	O75582	802 aa		12.97	□□□□□ -0.33
RANBP3-228	ENST00000592621	PLA2G4B	P0C869	781 aa		12.97	□□□□□ -0.33
RANBP3-228	ENST00000592621	DEFB103A	P81534	67 aa		12.97	□□□□□ -0.33
RANBP3-228	ENST00000592621	POU5F1B	Q06416	359 aa		12.97	□□□□□ -0.33
RANBP3-228	ENST00000592621	MAPK7	Q13164	816 aa		12.97	□□□□□ -0.33
RANBP3-228	ENST00000592621	PAK2	Q13177	524 aa		12.97	□□□□□ -0.33
RANBP3-228	ENST00000592621	CAPS	Q13938	189 aa		12.97	□□□□□ -0.33
RANBP3-228	ENST00000592621	MXD4	Q14582	209 aa	Predicted RBP	12.97	□□□□□ -0.33
RANBP3-228	ENST00000592621	ARSH	Q5FYA8	562 aa		12.97	□□□□□ -0.33
RANBP3-228	ENST00000592621	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	12.97	□□□□□ -0.33
RANBP3-228	ENST00000592621	FAM43B	Q6ZT52	329 aa	Predicted RBP	12.97	□□□□□ -0.33
RANBP3-228	ENST00000592621	MAEA	Q7L5Y9	396 aa		12.97	□□□□□ -0.33
RANBP3-228	ENST00000592621	RTN4RL1	Q86UN2	441 aa	Predicted RBP	12.97	□□□□□ -0.33
RANBP3-228	ENST00000592621	DAW1	Q8N136	415 aa		12.97	□□□□□ -0.33
RANBP3-228	ENST00000592621	RAD54L	Q92698	747 aa		12.97	□□□□□ -0.33
RANBP3-228	ENST00000592621	NLRP4	Q96MN2	994 aa		12.97	□□□□□ -0.33
RANBP3-228	ENST00000592621	NFKBIZ	Q9BYH8	718 aa		12.97	□□□□□ -0.33
RANBP3-228	ENST00000592621	POLR3F	Q9H1D9	316 aa	Predicted RBP	12.97	□□□□□ -0.33
RANBP3-228	ENST00000592621	MTIF3	Q9H2K0	278 aa	Known RBP	12.97	□□□□□ -0.33
RANBP3-228	ENST00000592621	MINDY3	Q9H8M7	445 aa		12.97	□□□□□ -0.33
RANBP3-228	ENST00000592621	ST3GAL5	Q9UNP4	418 aa		12.97	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms