RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 AK8Q96MA6 479 aa14.05□□□□□ -0.16
RETREG3-203ENST00000585894 NLRP4Q96MN2 994 aa14.05□□□□□ -0.16
RETREG3-203ENST00000585894 SCLT1Q96NL6 688 aa14.05□□□□□ -0.16
RETREG3-203ENST00000585894 NOC2LQ9Y3T9 749 aaKnown RBP14.05□□□□□ -0.16
RETREG3-203ENST00000585894 MYH11P35749 1972 aa14.05□□□□□ -0.16
RETREG3-203ENST00000585894 KDM3AQ9Y4C1 1321 aa14.05□□□□□ -0.16
RETREG3-203ENST00000585894 A0A087WZ62 844 aa14.04□□□□□ -0.16
RETREG3-203ENST00000585894 DGAT1O75907 488 aa14.04□□□□□ -0.16
RETREG3-203ENST00000585894 SSBP05455 408 aaKnown RBP eCLIP14.04□□□□□ -0.16
RETREG3-203ENST00000585894 XRCC6P12956 609 aaKnown RBP eCLIP14.04□□□□□ -0.16
RETREG3-203ENST00000585894 MUTP22033 750 aa14.04□□□□□ -0.16
RETREG3-203ENST00000585894 FGFR4P22455 802 aa14.04□□□□□ -0.16
RETREG3-203ENST00000585894 DNM2P50570 870 aa14.04□□□□□ -0.16
RETREG3-203ENST00000585894 TPRNQ4KMQ1 711 aa14.04□□□□□ -0.16
RETREG3-203ENST00000585894 PLEKHG4Q58EX7 1191 aa14.04□□□□□ -0.16
RETREG3-203ENST00000585894 ASAP3Q8TDY4 903 aa14.04□□□□□ -0.16
RETREG3-203ENST00000585894 PRPF31Q8WWY3 499 aaKnown RBP14.04□□□□□ -0.16
RETREG3-203ENST00000585894 NLRP7Q8WX94 980 aa14.04□□□□□ -0.16
RETREG3-203ENST00000585894 FDXACB1Q9BRP7 624 aaPredicted RBP14.04□□□□□ -0.16
RETREG3-203ENST00000585894 RUSC1Q9BVN2 902 aa14.04□□□□□ -0.16
RETREG3-203ENST00000585894 IFIH1Q9BYX4 1025 aaKnown RBP14.04□□□□□ -0.16
RETREG3-203ENST00000585894 PANK2Q9BZ23 570 aa14.04□□□□□ -0.16
RETREG3-203ENST00000585894 GDPD2Q9HCC8 539 aa14.04□□□□□ -0.16
RETREG3-203ENST00000585894 DNM3Q9UQ16 869 aa14.04□□□□□ -0.16
RETREG3-203ENST00000585894 STK24Q9Y6E0 443 aa14.04□□□□□ -0.16
RETREG3-203ENST00000585894 A0A087X0B3 334 aa14.04□□□□□ -0.16
RETREG3-203ENST00000585894 GRXCR1A8MXD5 290 aa14.04□□□□□ -0.16
RETREG3-203ENST00000585894 PARNO95453 639 aaKnown RBP14.04□□□□□ -0.16
RETREG3-203ENST00000585894 EYA4O95677 639 aa14.04□□□□□ -0.16
RETREG3-203ENST00000585894 PFKMP08237 780 aa14.04□□□□□ -0.16
RETREG3-203ENST00000585894 ME1P48163 572 aa14.04□□□□□ -0.16
RETREG3-203ENST00000585894 NUCB2P80303 420 aa14.04□□□□□ -0.16
RETREG3-203ENST00000585894 RAD51AP2Q09MP3 1159 aa14.04□□□□□ -0.16
RETREG3-203ENST00000585894 DHX8Q14562 1220 aaKnown RBP14.04□□□□□ -0.16
RETREG3-203ENST00000585894 AXDND1Q5T1B0 1012 aaPredicted RBP14.04□□□□□ -0.16
RETREG3-203ENST00000585894 FAM102BQ5T8I3 360 aa14.04□□□□□ -0.16
RETREG3-203ENST00000585894 CNKSR3Q6P9H4 555 aa14.04□□□□□ -0.16
RETREG3-203ENST00000585894 TSHZ1Q6ZSZ6 1077 aa14.04□□□□□ -0.16
RETREG3-203ENST00000585894 HERVK_113Q902F9 699 aa14.04□□□□□ -0.16
RETREG3-203ENST00000585894 CALML4Q96GE6 196 aa14.04□□□□□ -0.16
RETREG3-203ENST00000585894 POLR3FQ9H1D9 316 aaPredicted RBP14.04□□□□□ -0.16
RETREG3-203ENST00000585894 CFAP45Q9UL16 551 aa14.04□□□□□ -0.16
RETREG3-203ENST00000585894 PCDHA7Q9UN72 937 aa14.04□□□□□ -0.16
RETREG3-203ENST00000585894 PPME1Q9Y570 386 aa14.04□□□□□ -0.16
RETREG3-203ENST00000585894 COL4A3BPQ9Y5P4 624 aa14.04□□□□□ -0.16
RETREG3-203ENST00000585894 MORC2Q9Y6X9 1032 aaPredicted RBP14.04□□□□□ -0.16
RETREG3-203ENST00000585894 SOX1O00570 391 aaPredicted RBP14.03□□□□□ -0.16
RETREG3-203ENST00000585894 PPP6R2O75170 966 aa14.03□□□□□ -0.16
RETREG3-203ENST00000585894 RPLP2P05387 115 aaKnown RBP14.03□□□□□ -0.16
RETREG3-203ENST00000585894 SRGAP2CP0DJJ0 459 aa14.03□□□□□ -0.16
RETREG3-203ENST00000585894 CRYBB1P53674 252 aaPredicted RBP14.03□□□□□ -0.16
RETREG3-203ENST00000585894 KRT85P78386 507 aa14.03□□□□□ -0.16
RETREG3-203ENST00000585894 DEFB103AP81534 67 aa14.03□□□□□ -0.16
RETREG3-203ENST00000585894 LAMTOR4Q0VGL1 99 aa14.03□□□□□ -0.16
RETREG3-203ENST00000585894 NFX1Q12986 1120 aaKnown RBP14.03□□□□□ -0.16
RETREG3-203ENST00000585894 RASIP1Q5U651 963 aa14.03□□□□□ -0.16
RETREG3-203ENST00000585894 SHC4Q6S5L8 630 aa14.03□□□□□ -0.16
RETREG3-203ENST00000585894 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.03□□□□□ -0.16
RETREG3-203ENST00000585894 FAM228AQ86W67 206 aa14.03□□□□□ -0.16
RETREG3-203ENST00000585894 LEO1Q8WVC0 666 aaPredicted RBP14.03□□□□□ -0.16
RETREG3-203ENST00000585894 PSPC1Q8WXF1 523 aaKnown RBP14.03□□□□□ -0.16
RETREG3-203ENST00000585894 SEPT8Q92599 483 aa14.03□□□□□ -0.16
RETREG3-203ENST00000585894 JPH2Q9BR39 696 aaPredicted RBP14.03□□□□□ -0.16
RETREG3-203ENST00000585894 CCSER1Q9C0I3 900 aa14.03□□□□□ -0.16
RETREG3-203ENST00000585894 NT5C3AQ9H0P0 336 aa14.03□□□□□ -0.16
RETREG3-203ENST00000585894 BLOC1S4Q9NUP1 217 aa14.03□□□□□ -0.16
RETREG3-203ENST00000585894 RCOR1Q9UKL0 485 aa14.03□□□□□ -0.16
RETREG3-203ENST00000585894 PADI3Q9ULW8 664 aa14.03□□□□□ -0.16
RETREG3-203ENST00000585894 NPHP3-ACAD11A0A0J9YXS1 232 aa14.02□□□□□ -0.16
RETREG3-203ENST00000585894 PLA2G4BP0C869 781 aa14.02□□□□□ -0.16
RETREG3-203ENST00000585894 ACTN1P12814 892 aa14.02□□□□□ -0.16
RETREG3-203ENST00000585894 CYP11B2P19099 503 aa14.02□□□□□ -0.16
RETREG3-203ENST00000585894 GLRA2P23416 452 aa14.02□□□□□ -0.16
RETREG3-203ENST00000585894 ARL2P36404 184 aa14.02□□□□□ -0.16
RETREG3-203ENST00000585894 WDR5P61964 334 aaKnown RBP14.02□□□□□ -0.16
RETREG3-203ENST00000585894 CACNB1Q02641 598 aaPredicted RBP14.02□□□□□ -0.16
RETREG3-203ENST00000585894 PAK2Q13177 524 aa14.02□□□□□ -0.16
RETREG3-203ENST00000585894 MCM6Q14566 821 aa14.02□□□□□ -0.16
RETREG3-203ENST00000585894 HABP4Q5JVS0 413 aaKnown RBP14.02□□□□□ -0.16
RETREG3-203ENST00000585894 ATL3Q6DD88 541 aa14.02□□□□□ -0.16
RETREG3-203ENST00000585894 PDILTQ8N807 584 aa14.02□□□□□ -0.16
RETREG3-203ENST00000585894 KCNG4Q8TDN1 519 aa14.02□□□□□ -0.16
RETREG3-203ENST00000585894 TCP11Q8WWU5 503 aa14.02□□□□□ -0.16
RETREG3-203ENST00000585894 LINC01599Q8WXQ3 324 aa14.02□□□□□ -0.16
RETREG3-203ENST00000585894 BSNDQ8WZ55 320 aa14.02□□□□□ -0.16
RETREG3-203ENST00000585894 SPATA32Q96LK8 384 aa14.02□□□□□ -0.16
RETREG3-203ENST00000585894 TMX1Q9H3N1 280 aa14.02□□□□□ -0.16
RETREG3-203ENST00000585894 CUTAO60888 179 aa14.01□□□□□ -0.17
RETREG3-203ENST00000585894 RPS6KA5O75582 802 aa14.01□□□□□ -0.17
RETREG3-203ENST00000585894 DARSP14868 501 aaKnown RBP14.01□□□□□ -0.17
RETREG3-203ENST00000585894 IBSPP21815 317 aaPredicted RBP14.01□□□□□ -0.17
RETREG3-203ENST00000585894 SLC12A3P55017 1021 aa14.01□□□□□ -0.17
RETREG3-203ENST00000585894 CAPSQ13938 189 aa14.01□□□□□ -0.17
RETREG3-203ENST00000585894 RINT1Q6NUQ1 792 aa14.01□□□□□ -0.17
RETREG3-203ENST00000585894 EXOC8Q8IYI6 725 aa14.01□□□□□ -0.17
RETREG3-203ENST00000585894 RNF149Q8NC42 400 aa14.01□□□□□ -0.17
RETREG3-203ENST00000585894 MINDY3Q9H8M7 445 aa14.01□□□□□ -0.17
RETREG3-203ENST00000585894 IFT122Q9HBG6 1241 aa14.01□□□□□ -0.17
RETREG3-203ENST00000585894 ERVK-5Q9HDB9 667 aa14.01□□□□□ -0.17
RETREG3-203ENST00000585894 ST3GAL5Q9UNP4 418 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms