RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 ATP6V0A4Q9HBG4 840 aa13.3□□□□□ -0.28
RABGGTA-218ENST00000560777 CXXC1Q9P0U4 656 aaPredicted RBP13.3□□□□□ -0.28
RABGGTA-218ENST00000560777 GINS2Q9Y248 185 aa13.3□□□□□ -0.28
RABGGTA-218ENST00000560777 ATP6V1DQ9Y5K8 247 aa13.3□□□□□ -0.28
RABGGTA-218ENST00000560777 SQORQ9Y6N5 450 aa13.3□□□□□ -0.28
RABGGTA-218ENST00000560777 A0A1W2PPC1 479 aa13.29□□□□□ -0.28
RABGGTA-218ENST00000560777 ARHGEF35A5YM69 484 aa13.29□□□□□ -0.28
RABGGTA-218ENST00000560777 GAS2O43903 313 aaKnown RBP13.29□□□□□ -0.28
RABGGTA-218ENST00000560777 USO1O60763 962 aaKnown RBP13.29□□□□□ -0.28
RABGGTA-218ENST00000560777 CUTAO60888 179 aa13.29□□□□□ -0.28
RABGGTA-218ENST00000560777 CYP11B2P19099 503 aa13.29□□□□□ -0.28
RABGGTA-218ENST00000560777 ARL2P36404 184 aa13.29□□□□□ -0.28
RABGGTA-218ENST00000560777 KRT85P78386 507 aa13.29□□□□□ -0.28
RABGGTA-218ENST00000560777 CDC42EP1Q00587 391 aa13.29□□□□□ -0.28
RABGGTA-218ENST00000560777 CNKSR3Q6P9H4 555 aa13.29□□□□□ -0.28
RABGGTA-218ENST00000560777 TSHZ1Q6ZSZ6 1077 aa13.29□□□□□ -0.28
RABGGTA-218ENST00000560777 MAEAQ7L5Y9 396 aa13.29□□□□□ -0.28
RABGGTA-218ENST00000560777 RHPN2Q8IUC4 686 aa13.29□□□□□ -0.28
RABGGTA-218ENST00000560777 USP38Q8NB14 1042 aa13.29□□□□□ -0.28
RABGGTA-218ENST00000560777 KCNG4Q8TDN1 519 aa13.29□□□□□ -0.28
RABGGTA-218ENST00000560777 TCP11Q8WWU5 503 aa13.29□□□□□ -0.28
RABGGTA-218ENST00000560777 CALML4Q96GE6 196 aa13.29□□□□□ -0.28
RABGGTA-218ENST00000560777 CDK5RAP3Q96JB5 506 aa13.29□□□□□ -0.28
RABGGTA-218ENST00000560777 OSMRQ99650 979 aa13.29□□□□□ -0.28
RABGGTA-218ENST00000560777 IFIH1Q9BYX4 1025 aaKnown RBP13.29□□□□□ -0.28
RABGGTA-218ENST00000560777 PCDHA7Q9UN72 937 aa13.29□□□□□ -0.28
RABGGTA-218ENST00000560777 NOC2LQ9Y3T9 749 aaKnown RBP13.29□□□□□ -0.28
RABGGTA-218ENST00000560777 A0A087WZ62 844 aa13.28□□□□□ -0.28
RABGGTA-218ENST00000560777 ASAP2O43150 1006 aa13.28□□□□□ -0.28
RABGGTA-218ENST00000560777 ACTN1P12814 892 aa13.28□□□□□ -0.28
RABGGTA-218ENST00000560777 PLCG1P19174 1290 aa13.28□□□□□ -0.28
RABGGTA-218ENST00000560777 NCLP19338 710 aaKnown RBP13.28□□□□□ -0.28
RABGGTA-218ENST00000560777 CD52P31358 61 aa13.28□□□□□ -0.28
RABGGTA-218ENST00000560777 SLC12A3P55017 1021 aa13.28□□□□□ -0.28
RABGGTA-218ENST00000560777 LAMTOR4Q0VGL1 99 aa13.28□□□□□ -0.28
RABGGTA-218ENST00000560777 IKBKEQ14164 716 aa13.28□□□□□ -0.28
RABGGTA-218ENST00000560777 RINT1Q6NUQ1 792 aa13.28□□□□□ -0.28
RABGGTA-218ENST00000560777 SHC4Q6S5L8 630 aa13.28□□□□□ -0.28
RABGGTA-218ENST00000560777 C1orf186Q6ZWK4 172 aa13.28□□□□□ -0.28
RABGGTA-218ENST00000560777 SYT2Q8N9I0 419 aaPredicted RBP13.28□□□□□ -0.28
RABGGTA-218ENST00000560777 LEO1Q8WVC0 666 aaPredicted RBP13.28□□□□□ -0.28
RABGGTA-218ENST00000560777 NLRP7Q8WX94 980 aa13.28□□□□□ -0.28
RABGGTA-218ENST00000560777 PSPC1Q8WXF1 523 aaKnown RBP13.28□□□□□ -0.28
RABGGTA-218ENST00000560777 SEPT8Q92599 483 aa13.28□□□□□ -0.28
RABGGTA-218ENST00000560777 RNPC3Q96LT9 517 aaKnown RBP13.28□□□□□ -0.28
RABGGTA-218ENST00000560777 FDXACB1Q9BRP7 624 aaPredicted RBP13.28□□□□□ -0.28
RABGGTA-218ENST00000560777 POLD4Q9HCU8 107 aa13.28□□□□□ -0.28
RABGGTA-218ENST00000560777 GPRC5CQ9NQ84 441 aa13.28□□□□□ -0.28
RABGGTA-218ENST00000560777 BLOC1S4Q9NUP1 217 aa13.28□□□□□ -0.28
RABGGTA-218ENST00000560777 CIZ1Q9ULV3 898 aaPredicted RBP13.28□□□□□ -0.28
RABGGTA-218ENST00000560777 PADI3Q9ULW8 664 aa13.28□□□□□ -0.28
RABGGTA-218ENST00000560777 COL4A3BPQ9Y5P4 624 aa13.28□□□□□ -0.28
RABGGTA-218ENST00000560777 SIP14410 1827 aa13.27□□□□□ -0.28
RABGGTA-218ENST00000560777 ARID2Q68CP9 1835 aa13.27□□□□□ -0.28
RABGGTA-218ENST00000560777 ABHD14A-ACY1A0A1B0GW23 586 aa13.27□□□□□ -0.29
RABGGTA-218ENST00000560777 CSDE1O75534 798 aaKnown RBP13.27□□□□□ -0.29
RABGGTA-218ENST00000560777 RPS6KA5O75582 802 aa13.27□□□□□ -0.29
RABGGTA-218ENST00000560777 PLA2G4BP0C869 781 aa13.27□□□□□ -0.29
RABGGTA-218ENST00000560777 SRGAP2CP0DJJ0 459 aa13.27□□□□□ -0.29
RABGGTA-218ENST00000560777 DARSP14868 501 aaKnown RBP13.27□□□□□ -0.29
RABGGTA-218ENST00000560777 EIF4BP23588 611 aaKnown RBP13.27□□□□□ -0.29
RABGGTA-218ENST00000560777 ME1P48163 572 aa13.27□□□□□ -0.29
RABGGTA-218ENST00000560777 MXD4Q14582 209 aaPredicted RBP13.27□□□□□ -0.29
RABGGTA-218ENST00000560777 ZNF410Q86VK4 478 aa13.27□□□□□ -0.29
RABGGTA-218ENST00000560777 MCPH1Q8NEM0 835 aa13.27□□□□□ -0.29
RABGGTA-218ENST00000560777 ASAP3Q8TDY4 903 aa13.27□□□□□ -0.29
RABGGTA-218ENST00000560777 APBB2Q92870 758 aa13.27□□□□□ -0.29
RABGGTA-218ENST00000560777 SPATA32Q96LK8 384 aa13.27□□□□□ -0.29
RABGGTA-218ENST00000560777 NLRP4Q96MN2 994 aa13.27□□□□□ -0.29
RABGGTA-218ENST00000560777 RUSC1Q9BVN2 902 aa13.27□□□□□ -0.29
RABGGTA-218ENST00000560777 PANK2Q9BZ23 570 aa13.27□□□□□ -0.29
RABGGTA-218ENST00000560777 IFT122Q9HBG6 1241 aa13.27□□□□□ -0.29
RABGGTA-218ENST00000560777 CCDC39Q9UFE4 941 aa13.27□□□□□ -0.29
RABGGTA-218ENST00000560777 ST3GAL5Q9UNP4 418 aa13.27□□□□□ -0.29
RABGGTA-218ENST00000560777 LOXHD1Q8IVV2 1947 aa13.27□□□□□ -0.29
RABGGTA-218ENST00000560777 A0A087X0B3 334 aa13.26□□□□□ -0.29
RABGGTA-218ENST00000560777 GPR182O15218 404 aa13.26□□□□□ -0.29
RABGGTA-218ENST00000560777 BAIAP3O94812 1187 aa13.26□□□□□ -0.29
RABGGTA-218ENST00000560777 SSBP05455 408 aaKnown RBP eCLIP13.26□□□□□ -0.29
RABGGTA-218ENST00000560777 GLRA2P23416 452 aa13.26□□□□□ -0.29
RABGGTA-218ENST00000560777 TXLNAP40222 546 aa13.26□□□□□ -0.29
RABGGTA-218ENST00000560777 POU5F1BQ06416 359 aa13.26□□□□□ -0.29
RABGGTA-218ENST00000560777 TCHHQ07283 1943 aa13.26□□□□□ -0.29
RABGGTA-218ENST00000560777 NFX1Q12986 1120 aaKnown RBP13.26□□□□□ -0.29
RABGGTA-218ENST00000560777 PAK2Q13177 524 aa13.26□□□□□ -0.29
RABGGTA-218ENST00000560777 LRIT3Q3SXY7 679 aa13.26□□□□□ -0.29
RABGGTA-218ENST00000560777 NAALADL2Q58DX5 795 aa13.26□□□□□ -0.29
RABGGTA-218ENST00000560777 ARSHQ5FYA8 562 aa13.26□□□□□ -0.29
RABGGTA-218ENST00000560777 HABP4Q5JVS0 413 aaKnown RBP13.26□□□□□ -0.29
RABGGTA-218ENST00000560777 FAM102BQ5T8I3 360 aa13.26□□□□□ -0.29
RABGGTA-218ENST00000560777 RRAGBQ5VZM2 374 aa13.26□□□□□ -0.29
RABGGTA-218ENST00000560777 RTN4RL1Q86UN2 441 aaPredicted RBP13.26□□□□□ -0.29
RABGGTA-218ENST00000560777 FAM228AQ86W67 206 aa13.26□□□□□ -0.29
RABGGTA-218ENST00000560777 RNF149Q8NC42 400 aa13.26□□□□□ -0.29
RABGGTA-218ENST00000560777 RASSF8Q8NHQ8 419 aa13.26□□□□□ -0.29
RABGGTA-218ENST00000560777 RAD54LQ92698 747 aa13.26□□□□□ -0.29
RABGGTA-218ENST00000560777 SCLT1Q96NL6 688 aa13.26□□□□□ -0.29
RABGGTA-218ENST00000560777 GCOM2Q9BZD3 368 aaPredicted RBP13.26□□□□□ -0.29
RABGGTA-218ENST00000560777 SCAND2PQ9GZW5 306 aaPredicted RBP13.26□□□□□ -0.29
RABGGTA-218ENST00000560777 POLR3FQ9H1D9 316 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms