RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 ADD2P35612 726 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 ASMTP46597 345 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 RCAN1P53805 252 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 PPATQ06203 517 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 HSPA14Q0VDF9 509 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 BNIP1Q12981 228 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 SNAPC2Q13487 334 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 VGLL4Q14135 290 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 NFE2L1Q14494 772 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 PPP1R7Q15435 360 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 CFAP157Q5JU67 520 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 NCAPH2Q6IBW4 605 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 NEPROQ6NW34 567 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 LVRNQ6Q4G3 990 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 CORO6Q6QEF8 472 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 BTNL9Q6UXG8 535 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 MAATS1Q7Z4T9 603 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-216ENST00000523088 SPATA24Q86W54 205 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 CCDC83Q8IWF9 413 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 CACTINQ8WUQ7 758 aaKnown RBP8.2□□□□□ -1.1
HDAC3-216ENST00000523088 IPCEF1Q8WWN9 437 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-216ENST00000523088 COG8Q96MW5 612 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 MTMR9Q96QG7 549 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 WRNIP1Q96S55 665 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 ALG1Q9BT22 464 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 USP26Q9BXU7 913 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 TMEM39BQ9GZU3 492 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 SERHL2Q9H4I8 314 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 NCOR1P1Q9H4R4 102 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 CORO1CQ9ULV4 474 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-216ENST00000523088 DAGLAQ9Y4D2 1042 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 PCDHAC2Q9Y5I4 1007 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.2□□□□□ -1.1
HDAC3-216ENST00000523088 hCG_1984214I3L0E3 225 aa8.19□□□□□ -1.1
HDAC3-216ENST00000523088 PLOD2O00469 737 aa8.19□□□□□ -1.1
HDAC3-216ENST00000523088 SCAMP3O14828 347 aaKnown RBP8.19□□□□□ -1.1
HDAC3-216ENST00000523088 SULT1B1O43704 296 aa8.19□□□□□ -1.1
HDAC3-216ENST00000523088 TMCC1O94876 653 aa8.19□□□□□ -1.1
HDAC3-216ENST00000523088 TBC1D8O95759 1140 aa8.19□□□□□ -1.1
HDAC3-216ENST00000523088 CAVIN2O95810 425 aa8.19□□□□□ -1.1
HDAC3-216ENST00000523088 GNRH1P01148 92 aa8.19□□□□□ -1.1
HDAC3-216ENST00000523088 ZFYP08048 801 aaPredicted RBP8.19□□□□□ -1.1
HDAC3-216ENST00000523088 XRCC5P13010 732 aaKnown RBP8.19□□□□□ -1.1
HDAC3-216ENST00000523088 PRLRP16471 622 aa8.19□□□□□ -1.1
HDAC3-216ENST00000523088 PRDX5P30044 214 aa8.19□□□□□ -1.1
HDAC3-216ENST00000523088 PHKA1P46020 1223 aa8.19□□□□□ -1.1
HDAC3-216ENST00000523088 PFKPQ01813 784 aa8.19□□□□□ -1.1
HDAC3-216ENST00000523088 AKAP17AQ02040 695 aaKnown RBP8.19□□□□□ -1.1
HDAC3-216ENST00000523088 CBX3Q13185 183 aa8.19□□□□□ -1.1
HDAC3-216ENST00000523088 PPIL2Q13356 520 aa8.19□□□□□ -1.1
HDAC3-216ENST00000523088 RASGRF1Q13972 1273 aa8.19□□□□□ -1.1
HDAC3-216ENST00000523088 MAPRE2Q15555 327 aa8.19□□□□□ -1.1
HDAC3-216ENST00000523088 BEND6Q5SZJ8 279 aaPredicted RBP8.19□□□□□ -1.1
HDAC3-216ENST00000523088 TLDC1Q6P9B6 456 aa8.19□□□□□ -1.1
HDAC3-216ENST00000523088 ANGPTL8Q6UXH0 198 aa8.19□□□□□ -1.1
HDAC3-216ENST00000523088 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.19□□□□□ -1.1
HDAC3-216ENST00000523088 BTN2A1Q7KYR7 527 aa8.19□□□□□ -1.1
HDAC3-216ENST00000523088 SLC44A2Q8IWA5 706 aaPredicted RBP8.19□□□□□ -1.1
HDAC3-216ENST00000523088 FNIP1Q8TF40 1166 aa8.19□□□□□ -1.1
HDAC3-216ENST00000523088 ZNF606Q8WXB4 792 aa8.19□□□□□ -1.1
HDAC3-216ENST00000523088 XAGE2Q96GT9 111 aa8.19□□□□□ -1.1
HDAC3-216ENST00000523088 JPH2Q9BR39 696 aaPredicted RBP8.19□□□□□ -1.1
HDAC3-216ENST00000523088 IDI2Q9BXS1 227 aa8.19□□□□□ -1.1
HDAC3-216ENST00000523088 AGXT2Q9BYV1 514 aa8.19□□□□□ -1.1
HDAC3-216ENST00000523088 TRPV6Q9H1D0 765 aa8.19□□□□□ -1.1
HDAC3-216ENST00000523088 ELP3Q9H9T3 547 aa8.19□□□□□ -1.1
HDAC3-216ENST00000523088 ZFYVE28Q9HCC9 887 aa8.19□□□□□ -1.1
HDAC3-216ENST00000523088 PTPRHQ9HD43 1115 aa8.19□□□□□ -1.1
HDAC3-216ENST00000523088 ANO2Q9NQ90 1003 aa8.19□□□□□ -1.1
HDAC3-216ENST00000523088 LUZP4Q9P127 313 aa8.19□□□□□ -1.1
HDAC3-216ENST00000523088 PARP2Q9UGN5 583 aa8.19□□□□□ -1.1
HDAC3-216ENST00000523088 TTC7AQ9ULT0 858 aaPredicted RBP8.19□□□□□ -1.1
HDAC3-216ENST00000523088 BZW2Q9Y6E2 419 aaKnown RBP8.19□□□□□ -1.1
HDAC3-216ENST00000523088 FOCADQ5VW36 1801 aa8.19□□□□□ -1.1
HDAC3-216ENST00000523088 CCL15-CCL14A0A0B4J2E2 113 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 LACTBL1A8MY62 500 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 TEX28O15482 410 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 BCAR3O75815 825 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 CYP17A1P05093 508 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 ITGB1P05556 798 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 CTNNA1P35221 906 aaKnown RBP8.18□□□□□ -1.1
HDAC3-216ENST00000523088 SLC16A2P36021 539 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 SLC4A3P48751 1232 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 MCM2P49736 904 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 SP3Q02447 781 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 TFCP2Q12800 502 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 LAMC2Q13753 1193 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 BYSLQ13895 437 aaKnown RBP8.18□□□□□ -1.1
HDAC3-216ENST00000523088 BCL2A1Q16548 175 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 CCL15Q16663 113 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 NOL9Q5SY16 702 aaKnown RBP8.18□□□□□ -1.1
HDAC3-216ENST00000523088 FKBP15Q5T1M5 1219 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 METTL11BQ5VVY1 283 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 TWF2Q6IBS0 349 aaKnown RBP8.18□□□□□ -1.1
HDAC3-216ENST00000523088 CDC42EP5Q6NZY7 148 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 PPP1R21Q6ZMI0 780 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 TBC1D9Q6ZT07 1266 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 B4GALNT4Q76KP1 1039 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 TMEM57Q8N5G2 664 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms