RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 ARHGEF15O94989 841 aa23.82■■□□□ 1.4
UBE2D3-229ENST00000510129 SFPQP23246 707 aaKnown RBP eCLIP23.82■■□□□ 1.43e-6■□□□□ 10.5
UBE2D3-229ENST00000510129 XKR9Q5GH70 373 aa23.82■■□□□ 1.4
UBE2D3-229ENST00000510129 RTN4RL1Q86UN2 441 aaPredicted RBP23.82■■□□□ 1.4
UBE2D3-229ENST00000510129 FAM228AQ86W67 206 aa23.82■■□□□ 1.4
UBE2D3-229ENST00000510129 CMTR2Q8IYT2 770 aaKnown RBP23.82■■□□□ 1.4
UBE2D3-229ENST00000510129 FBXO22Q8NEZ5 403 aa23.82■■□□□ 1.4
UBE2D3-229ENST00000510129 PSPC1Q8WXF1 523 aaKnown RBP23.82■■□□□ 1.4
UBE2D3-229ENST00000510129 LINC01599Q8WXQ3 324 aa23.82■■□□□ 1.4
UBE2D3-229ENST00000510129 ADAM2Q99965 735 aa23.82■■□□□ 1.4
UBE2D3-229ENST00000510129 TMEM60Q9H2L4 133 aa23.82■■□□□ 1.4
UBE2D3-229ENST00000510129 TUFT1Q9NNX1 390 aa23.82■■□□□ 1.4
UBE2D3-229ENST00000510129 WRAP73Q9P2S5 460 aaPredicted RBP23.82■■□□□ 1.4
UBE2D3-229ENST00000510129 PCDHB7Q9Y5E2 793 aa23.82■■□□□ 1.4
UBE2D3-229ENST00000510129 GTF3C3Q9Y5Q9 886 aa23.82■■□□□ 1.4
UBE2D3-229ENST00000510129 MUTP22033 750 aa23.81■■□□□ 1.4
UBE2D3-229ENST00000510129 NPEPPSP55786 919 aa23.81■■□□□ 1.4
UBE2D3-229ENST00000510129 HAUS3Q68CZ6 603 aa23.81■■□□□ 1.4
UBE2D3-229ENST00000510129 MCTP1Q6DN14 999 aa23.81■■□□□ 1.4
UBE2D3-229ENST00000510129 RHPN2Q8IUC4 686 aa23.81■■□□□ 1.4
UBE2D3-229ENST00000510129 CRIPAKQ8N1N5 446 aa23.81■■□□□ 1.4
UBE2D3-229ENST00000510129 ZNF689Q96CS4 500 aaPredicted RBP23.81■■□□□ 1.4
UBE2D3-229ENST00000510129 ELAC1Q9H777 363 aaKnown RBP23.81■■□□□ 1.4
UBE2D3-229ENST00000510129 RC3H2Q9HBD1 1191 aaKnown RBP23.81■■□□□ 1.4
UBE2D3-229ENST00000510129 DACT1Q9NYF0 836 aa23.81■■□□□ 1.4
UBE2D3-229ENST00000510129 DGAT1O75907 488 aa23.8■■□□□ 1.4
UBE2D3-229ENST00000510129 RB1P06400 928 aa23.8■■□□□ 1.4
UBE2D3-229ENST00000510129 PDCP20941 246 aa23.8■■□□□ 1.4
UBE2D3-229ENST00000510129 TECP42680 631 aa23.8■■□□□ 1.4
UBE2D3-229ENST00000510129 BTG3Q14201 252 aaPredicted RBP23.8■■□□□ 1.4
UBE2D3-229ENST00000510129 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.8■■□□□ 1.44e-11■□□□□ 10.1
UBE2D3-229ENST00000510129 MTRQ99707 1265 aa23.8■■□□□ 1.4
UBE2D3-229ENST00000510129 SH2D3AQ9BRG2 576 aa23.8■■□□□ 1.4
UBE2D3-229ENST00000510129 POLR3CQ9BUI4 534 aaPredicted RBP23.8■■□□□ 1.4
UBE2D3-229ENST00000510129 CHST12Q9NRB3 414 aa23.8■■□□□ 1.4
UBE2D3-229ENST00000510129 RALGAPA2Q2PPJ7 1873 aa23.79■■□□□ 1.4
UBE2D3-229ENST00000510129 POTEMA6NI47 508 aa23.79■■□□□ 1.4
UBE2D3-229ENST00000510129 C9IYK1 514 aa23.79■■□□□ 1.4
UBE2D3-229ENST00000510129 HOXA2O43364 376 aa23.79■■□□□ 1.4
UBE2D3-229ENST00000510129 FXR2P51116 673 aaKnown RBP eCLIP23.79■■□□□ 1.4
UBE2D3-229ENST00000510129 GRB10Q13322 594 aa23.79■■□□□ 1.4
UBE2D3-229ENST00000510129 DRP2Q13474 957 aa23.79■■□□□ 1.4
UBE2D3-229ENST00000510129 PDIA5Q14554 519 aa23.79■■□□□ 1.4
UBE2D3-229ENST00000510129 MXD4Q14582 209 aaPredicted RBP23.79■■□□□ 1.4
UBE2D3-229ENST00000510129 EMC2Q15006 297 aa23.79■■□□□ 1.4
UBE2D3-229ENST00000510129 PTPROQ16827 1216 aa23.79■■□□□ 1.4
UBE2D3-229ENST00000510129 LARP1BQ659C4 914 aaKnown RBP23.79■■□□□ 1.4
UBE2D3-229ENST00000510129 TMEM192Q8IY95 271 aa23.79■■□□□ 1.4
UBE2D3-229ENST00000510129 TMEM161AQ9NX61 479 aa23.79■■□□□ 1.4
UBE2D3-229ENST00000510129 MTUS1Q9ULD2 1270 aa23.79■■□□□ 1.4
UBE2D3-229ENST00000510129 COL4A3BPQ9Y5P4 624 aa23.79■■□□□ 1.4
UBE2D3-229ENST00000510129 MTCH2Q9Y6C9 303 aa23.79■■□□□ 1.4
UBE2D3-229ENST00000510129 EPOPA6NHQ4 379 aa23.78■■□□□ 1.4
UBE2D3-229ENST00000510129 RPA1P27694 616 aa23.78■■□□□ 1.4
UBE2D3-229ENST00000510129 PRPHP41219 470 aa23.78■■□□□ 1.4
UBE2D3-229ENST00000510129 FAM189BP81408 668 aa23.78■■□□□ 1.4
UBE2D3-229ENST00000510129 CUL4AQ13619 759 aa23.78■■□□□ 1.4
UBE2D3-229ENST00000510129 DSC3Q14574 896 aa23.78■■□□□ 1.4
UBE2D3-229ENST00000510129 PCBP1Q15365 356 aaKnown RBP eCLIP23.78■■□□□ 1.49e-7■□□□□ 10.8
UBE2D3-229ENST00000510129 EPC2Q52LR7 807 aa23.78■■□□□ 1.4
UBE2D3-229ENST00000510129 RSPH1Q8WYR4 309 aa23.78■■□□□ 1.4
UBE2D3-229ENST00000510129 CLP1Q92989 425 aaKnown RBP23.78■■□□□ 1.4
UBE2D3-229ENST00000510129 NACC1Q96RE7 527 aa23.78■■□□□ 1.4
UBE2D3-229ENST00000510129 C17orf80Q9BSJ5 609 aa23.78■■□□□ 1.4
UBE2D3-229ENST00000510129 C11orf84Q9BUA3 381 aaPredicted RBP23.78■■□□□ 1.4
UBE2D3-229ENST00000510129 PLVAPQ9BX97 442 aa23.78■■□□□ 1.4
UBE2D3-229ENST00000510129 ATP6V0A4Q9HBG4 840 aa23.78■■□□□ 1.4
UBE2D3-229ENST00000510129 A0A087WZ62 844 aa23.77■■□□□ 1.4
UBE2D3-229ENST00000510129 C5orf67F2Z3F1 127 aa23.77■■□□□ 1.4
UBE2D3-229ENST00000510129 RFXAPO00287 272 aa23.77■■□□□ 1.4
UBE2D3-229ENST00000510129 MGEA5O60502 916 aa23.77■■□□□ 1.4
UBE2D3-229ENST00000510129 SKIP12755 728 aa23.77■■□□□ 1.4
UBE2D3-229ENST00000510129 SRGAP1Q7Z6B7 1085 aa23.77■■□□□ 1.4
UBE2D3-229ENST00000510129 NLRP4Q96MN2 994 aa23.77■■□□□ 1.4
UBE2D3-229ENST00000510129 FDXACB1Q9BRP7 624 aaPredicted RBP23.77■■□□□ 1.4
UBE2D3-229ENST00000510129 DBR1Q9UK59 544 aaKnown RBP23.77■■□□□ 1.4
UBE2D3-229ENST00000510129 ARID2Q68CP9 1835 aa23.76■■□□□ 1.39
UBE2D3-229ENST00000510129 H3BNC9 293 aa23.76■■□□□ 1.39
UBE2D3-229ENST00000510129 LPXNO60711 386 aa23.76■■□□□ 1.39
UBE2D3-229ENST00000510129 RARRES1P49788 294 aa23.76■■□□□ 1.39
UBE2D3-229ENST00000510129 TOB1P50616 345 aaPredicted RBP23.76■■□□□ 1.39
UBE2D3-229ENST00000510129 PTGDRQ13258 359 aa23.76■■□□□ 1.39
UBE2D3-229ENST00000510129 TFDP1Q14186 410 aa23.76■■□□□ 1.39
UBE2D3-229ENST00000510129 NAALADL2Q58DX5 795 aa23.76■■□□□ 1.39
UBE2D3-229ENST00000510129 CATSPER3Q86XQ3 398 aa23.76■■□□□ 1.39
UBE2D3-229ENST00000510129 PRPF31Q8WWY3 499 aaKnown RBP23.76■■□□□ 1.39
UBE2D3-229ENST00000510129 LRWD1Q9UFC0 647 aa23.76■■□□□ 1.39
UBE2D3-229ENST00000510129 COL4A4P53420 1690 aaPredicted RBP23.76■■□□□ 1.39
UBE2D3-229ENST00000510129 MYO9BQ13459 2157 aa23.75■■□□□ 1.39
UBE2D3-229ENST00000510129 CHD9Q3L8U1 2897 aa23.75■■□□□ 1.39
UBE2D3-229ENST00000510129 SPATA31C1P0DKV0 1188 aa23.75■■□□□ 1.39
UBE2D3-229ENST00000510129 BMPR1AP36894 532 aa23.75■■□□□ 1.39
UBE2D3-229ENST00000510129 POU5F1BQ06416 359 aa23.75■■□□□ 1.39
UBE2D3-229ENST00000510129 LAMTOR4Q0VGL1 99 aa23.75■■□□□ 1.39
UBE2D3-229ENST00000510129 FERMT3Q86UX7 667 aa23.75■■□□□ 1.39
UBE2D3-229ENST00000510129 C4orf32Q8N8J7 132 aa23.75■■□□□ 1.39
UBE2D3-229ENST00000510129 ZNF579Q8NAF0 562 aaKnown RBP23.75■■□□□ 1.39
UBE2D3-229ENST00000510129 GDPD5Q8WTR4 605 aa23.75■■□□□ 1.39
UBE2D3-229ENST00000510129 PPM1EQ8WY54 764 aa23.75■■□□□ 1.39
UBE2D3-229ENST00000510129 TMEM143Q96AN5 459 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms