RNA–Protein interactions for RNA: ENST00000508473.5

SRPK1-210, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-210ENST00000508473 NPAS4Q8IUM7 802 aa26.97■■□□□ 1.91
SRPK1-210ENST00000508473 KSR1Q8IVT5 923 aa26.97■■□□□ 1.91
SRPK1-210ENST00000508473 ZNF710Q8N1W2 664 aa26.97■■□□□ 1.91
SRPK1-210ENST00000508473 TMEM143Q96AN5 459 aa26.97■■□□□ 1.91
SRPK1-210ENST00000508473 PCDHB6Q9Y5E3 794 aa26.97■■□□□ 1.91
SRPK1-210ENST00000508473 A0A087WZ62 844 aa26.96■■□□□ 1.91
SRPK1-210ENST00000508473 RFC5P40937 340 aa26.96■■□□□ 1.91
SRPK1-210ENST00000508473 FIBCD1Q8N539 461 aa26.96■■□□□ 1.91
SRPK1-210ENST00000508473 C4orf32Q8N8J7 132 aa26.96■■□□□ 1.91
SRPK1-210ENST00000508473 NLRP4Q96MN2 994 aa26.96■■□□□ 1.91
SRPK1-210ENST00000508473 FDXACB1Q9BRP7 624 aaPredicted RBP26.96■■□□□ 1.91
SRPK1-210ENST00000508473 GCOM2Q9BZD3 368 aaPredicted RBP26.96■■□□□ 1.91
SRPK1-210ENST00000508473 DHX33Q9H6R0 707 aaKnown RBP26.96■■□□□ 1.91
SRPK1-210ENST00000508473 LRFN2Q9ULH4 789 aa26.96■■□□□ 1.91
SRPK1-210ENST00000508473 TTC3P53804 2025 aa26.95■■□□□ 1.91
SRPK1-210ENST00000508473 GTPBP6O43824 516 aaPredicted RBP26.95■■□□□ 1.9
SRPK1-210ENST00000508473 LPXNO60711 386 aa26.95■■□□□ 1.9
SRPK1-210ENST00000508473 DGKIO75912 1065 aa26.95■■□□□ 1.9
SRPK1-210ENST00000508473 LYPLA2O95372 231 aa26.95■■□□□ 1.9
SRPK1-210ENST00000508473 STAG3L1P0CL83 205 aa26.95■■□□□ 1.9
SRPK1-210ENST00000508473 SARSP49591 514 aaKnown RBP26.95■■□□□ 1.9
SRPK1-210ENST00000508473 EMC2Q15006 297 aa26.95■■□□□ 1.9
SRPK1-210ENST00000508473 LARP1BQ659C4 914 aaKnown RBP26.95■■□□□ 1.9
SRPK1-210ENST00000508473 CRIPAKQ8N1N5 446 aa26.95■■□□□ 1.9
SRPK1-210ENST00000508473 FBXO22Q8NEZ5 403 aa26.95■■□□□ 1.9
SRPK1-210ENST00000508473 PIGOQ8TEQ8 1089 aa26.95■■□□□ 1.9
SRPK1-210ENST00000508473 RC3H2Q9HBD1 1191 aaKnown RBP26.95■■□□□ 1.9
SRPK1-210ENST00000508473 RGS18Q9NS28 235 aa26.95■■□□□ 1.9
SRPK1-210ENST00000508473 PPME1Q9Y570 386 aa26.95■■□□□ 1.9
SRPK1-210ENST00000508473 MTCH2Q9Y6C9 303 aa26.95■■□□□ 1.9
SRPK1-210ENST00000508473 CHD7Q9P2D1 2997 aa26.94■■□□□ 1.9
SRPK1-210ENST00000508473 ADGRA3Q8IWK6 1321 aa26.94■■□□□ 1.9
SRPK1-210ENST00000508473 MED24O75448 989 aa26.94■■□□□ 1.9
SRPK1-210ENST00000508473 SPATA31C1P0DKV0 1188 aa26.94■■□□□ 1.9
SRPK1-210ENST00000508473 GATMP50440 423 aa26.94■■□□□ 1.9
SRPK1-210ENST00000508473 CDC42EP1Q00587 391 aa26.94■■□□□ 1.9
SRPK1-210ENST00000508473 CUL4AQ13619 759 aa26.94■■□□□ 1.9
SRPK1-210ENST00000508473 BTG3Q14201 252 aaPredicted RBP26.94■■□□□ 1.9
SRPK1-210ENST00000508473 DSC3Q14574 896 aa26.94■■□□□ 1.9
SRPK1-210ENST00000508473 ZNF689Q96CS4 500 aaPredicted RBP26.94■■□□□ 1.9
SRPK1-210ENST00000508473 C1orf112Q9NSG2 853 aa26.94■■□□□ 1.9
SRPK1-210ENST00000508473 PCDHB7Q9Y5E2 793 aa26.94■■□□□ 1.9
SRPK1-210ENST00000508473 C9IYK1 514 aa26.93■■□□□ 1.9
SRPK1-210ENST00000508473 PTGDRQ13258 359 aa26.93■■□□□ 1.9
SRPK1-210ENST00000508473 PAN2Q504Q3 1202 aaKnown RBP26.93■■□□□ 1.9
SRPK1-210ENST00000508473 EPC2Q52LR7 807 aa26.93■■□□□ 1.9
SRPK1-210ENST00000508473 SLC24A5Q71RS6 500 aa26.93■■□□□ 1.9
SRPK1-210ENST00000508473 CATSPER3Q86XQ3 398 aa26.93■■□□□ 1.9
SRPK1-210ENST00000508473 TMEM192Q8IY95 271 aa26.93■■□□□ 1.9
SRPK1-210ENST00000508473 EXOC8Q8IYI6 725 aa26.93■■□□□ 1.9
SRPK1-210ENST00000508473 PRPF31Q8WWY3 499 aaKnown RBP26.93■■□□□ 1.9
SRPK1-210ENST00000508473 CCDC43Q96MW1 224 aaKnown RBP26.93■■□□□ 1.9
SRPK1-210ENST00000508473 PRDM6Q9NQX0 595 aa26.93■■□□□ 1.9
SRPK1-210ENST00000508473 ANKEF1Q9NU02 776 aa26.93■■□□□ 1.9
SRPK1-210ENST00000508473 COL4A3BPQ9Y5P4 624 aa26.93■■□□□ 1.9
SRPK1-210ENST00000508473 ZSCAN20P17040 1043 aaPredicted RBP26.92■■□□□ 1.9
SRPK1-210ENST00000508473 ZNF410Q86VK4 478 aa26.92■■□□□ 1.9
SRPK1-210ENST00000508473 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.92■■□□□ 1.9
SRPK1-210ENST00000508473 PSPC1Q8WXF1 523 aaKnown RBP26.92■■□□□ 1.9
SRPK1-210ENST00000508473 MTRQ99707 1265 aa26.92■■□□□ 1.9
SRPK1-210ENST00000508473 TUFT1Q9NNX1 390 aa26.92■■□□□ 1.9
SRPK1-210ENST00000508473 SRGAP2CP0DJJ0 459 aa26.91■■□□□ 1.9
SRPK1-210ENST00000508473 RARRES1P49788 294 aa26.91■■□□□ 1.9
SRPK1-210ENST00000508473 FAM43BQ6ZT52 329 aaPredicted RBP26.91■■□□□ 1.9
SRPK1-210ENST00000508473 ERMNQ8TAM6 284 aa26.91■■□□□ 1.9
SRPK1-210ENST00000508473 SAMD11Q96NU1 681 aa26.91■■□□□ 1.9
SRPK1-210ENST00000508473 XPNPEP1Q9NQW7 623 aa26.91■■□□□ 1.9
SRPK1-210ENST00000508473 POU3F3P20264 500 aaPredicted RBP26.9■■□□□ 1.9
SRPK1-210ENST00000508473 CTNNB1P35222 781 aa26.9■■□□□ 1.9
SRPK1-210ENST00000508473 LAMTOR4Q0VGL1 99 aa26.9■■□□□ 1.9
SRPK1-210ENST00000508473 POTEGQ6S5H5 508 aa26.9■■□□□ 1.9
SRPK1-210ENST00000508473 TCP11Q8WWU5 503 aa26.9■■□□□ 1.9
SRPK1-210ENST00000508473 POLR3CQ9BUI4 534 aaPredicted RBP26.9■■□□□ 1.9
SRPK1-210ENST00000508473 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.9■■□□□ 1.9
SRPK1-210ENST00000508473 PRRC2BQ5JSZ5 2229 aaKnown RBP26.89■■□□□ 1.9
SRPK1-210ENST00000508473 FXR2P51116 673 aaKnown RBP eCLIP26.89■■□□□ 1.9
SRPK1-210ENST00000508473 RILPL1Q5EBL4 403 aa26.89■■□□□ 1.9
SRPK1-210ENST00000508473 FAM102BQ5T8I3 360 aa26.89■■□□□ 1.9
SRPK1-210ENST00000508473 CMTR2Q8IYT2 770 aaKnown RBP26.89■■□□□ 1.9
SRPK1-210ENST00000508473 ATP6V0A4Q9HBG4 840 aa26.89■■□□□ 1.9
SRPK1-210ENST00000508473 IFT122Q9HBG6 1241 aa26.89■■□□□ 1.9
SRPK1-210ENST00000508473 LRWD1Q9UFC0 647 aa26.89■■□□□ 1.9
SRPK1-210ENST00000508473 MRPL42Q9Y6G3 142 aaKnown RBP26.89■■□□□ 1.9
SRPK1-210ENST00000508473 COL4A6Q14031 1691 aa26.89■■□□□ 1.89
SRPK1-210ENST00000508473 GAS2O43903 313 aaKnown RBP26.88■■□□□ 1.89
SRPK1-210ENST00000508473 USO1O60763 962 aaKnown RBP26.88■■□□□ 1.89
SRPK1-210ENST00000508473 DGAT1O75907 488 aa26.88■■□□□ 1.89
SRPK1-210ENST00000508473 LINC00271P0C7V0 271 aa26.88■■□□□ 1.89
SRPK1-210ENST00000508473 FGFR1P11362 822 aa26.88■■□□□ 1.89
SRPK1-210ENST00000508473 SFPQP23246 707 aaKnown RBP eCLIP26.88■■□□□ 1.89
SRPK1-210ENST00000508473 RPA1P27694 616 aa26.88■■□□□ 1.89
SRPK1-210ENST00000508473 FAM189BP81408 668 aa26.88■■□□□ 1.89
SRPK1-210ENST00000508473 GPM6BQ13491 265 aa26.88■■□□□ 1.89
SRPK1-210ENST00000508473 FERMT3Q86UX7 667 aa26.88■■□□□ 1.89
SRPK1-210ENST00000508473 INO80BQ9C086 356 aaPredicted RBP26.88■■□□□ 1.89
SRPK1-210ENST00000508473 FOXD4L1Q9NU39 408 aa26.88■■□□□ 1.89
SRPK1-210ENST00000508473 COL4A4P53420 1690 aaPredicted RBP26.88■■□□□ 1.89
SRPK1-210ENST00000508473 TBKBP1A7MCY6 615 aa26.87■■□□□ 1.89
SRPK1-210ENST00000508473 XRCC6P12956 609 aaKnown RBP eCLIP26.87■■□□□ 1.89
SRPK1-210ENST00000508473 BMPR1AP36894 532 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms