RNA–Protein interactions for RNA: ENST00000475706.5

BRD9-203, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 744 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-203ENST00000475706 ZNF710Q8N1W2 664 aa12.94□□□□□ -0.34
BRD9-203ENST00000475706 PPM1EQ8WY54 764 aa12.94□□□□□ -0.34
BRD9-203ENST00000475706 TMEM143Q96AN5 459 aa12.94□□□□□ -0.34
BRD9-203ENST00000475706 NLRP4Q96MN2 994 aa12.94□□□□□ -0.34
BRD9-203ENST00000475706 ADAM2Q99965 735 aa12.94□□□□□ -0.34
BRD9-203ENST00000475706 FDXACB1Q9BRP7 624 aaPredicted RBP12.94□□□□□ -0.34
BRD9-203ENST00000475706 GCOM2Q9BZD3 368 aaPredicted RBP12.94□□□□□ -0.34
BRD9-203ENST00000475706 TMX1Q9H3N1 280 aa12.94□□□□□ -0.34
BRD9-203ENST00000475706 TUFT1Q9NNX1 390 aa12.94□□□□□ -0.34
BRD9-203ENST00000475706 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.94□□□□□ -0.34
BRD9-203ENST00000475706 ANKEF1Q9NU02 776 aa12.94□□□□□ -0.34
BRD9-203ENST00000475706 LRWD1Q9UFC0 647 aa12.94□□□□□ -0.34
BRD9-203ENST00000475706 PPME1Q9Y570 386 aa12.94□□□□□ -0.34
BRD9-203ENST00000475706 LAMA3Q16787 3333 aa12.93□□□□□ -0.34
BRD9-203ENST00000475706 MYO7AQ13402 2215 aa12.93□□□□□ -0.34
BRD9-203ENST00000475706 COL4A4P53420 1690 aaPredicted RBP12.93□□□□□ -0.34
BRD9-203ENST00000475706 LINC01553A4QN01 128 aa12.93□□□□□ -0.34
BRD9-203ENST00000475706 MGEA5O60502 916 aa12.93□□□□□ -0.34
BRD9-203ENST00000475706 CSDE1O75534 798 aaKnown RBP12.93□□□□□ -0.34
BRD9-203ENST00000475706 LYPLA2O95372 231 aa12.93□□□□□ -0.34
BRD9-203ENST00000475706 STAG3L1P0CL83 205 aa12.93□□□□□ -0.34
BRD9-203ENST00000475706 SRGAP2CP0DJJ0 459 aa12.93□□□□□ -0.34
BRD9-203ENST00000475706 SPATA31C1P0DKV0 1188 aa12.93□□□□□ -0.34
BRD9-203ENST00000475706 DARSP14868 501 aaKnown RBP12.93□□□□□ -0.34
BRD9-203ENST00000475706 ZSCAN20P17040 1043 aaPredicted RBP12.93□□□□□ -0.34
BRD9-203ENST00000475706 PDCP20941 246 aa12.93□□□□□ -0.34
BRD9-203ENST00000475706 CCT6AP40227 531 aaKnown RBP12.93□□□□□ -0.34
BRD9-203ENST00000475706 HTRA4P83105 476 aaPredicted RBP12.93□□□□□ -0.34
BRD9-203ENST00000475706 EMC2Q15006 297 aa12.93□□□□□ -0.34
BRD9-203ENST00000475706 FERMT3Q86UX7 667 aa12.93□□□□□ -0.34
BRD9-203ENST00000475706 CATSPER3Q86XQ3 398 aa12.93□□□□□ -0.34
BRD9-203ENST00000475706 HSCBQ8IWL3 235 aa12.93□□□□□ -0.34
BRD9-203ENST00000475706 MAFAQ8NHW3 353 aaPredicted RBP12.93□□□□□ -0.34
BRD9-203ENST00000475706 TCP11Q8WWU5 503 aa12.93□□□□□ -0.34
BRD9-203ENST00000475706 TGS1Q96RS0 853 aaKnown RBP12.93□□□□□ -0.34
BRD9-203ENST00000475706 MTRQ99707 1265 aa12.93□□□□□ -0.34
BRD9-203ENST00000475706 POLR3CQ9BUI4 534 aaPredicted RBP12.93□□□□□ -0.34
BRD9-203ENST00000475706 RAB34Q9BZG1 259 aa12.93□□□□□ -0.34
BRD9-203ENST00000475706 TSPYL2Q9H2G4 693 aaPredicted RBP12.93□□□□□ -0.34
BRD9-203ENST00000475706 DHX33Q9H6R0 707 aaKnown RBP12.93□□□□□ -0.34
BRD9-203ENST00000475706 PCDHB7Q9Y5E2 793 aa12.93□□□□□ -0.34
BRD9-203ENST00000475706 COL4A3BPQ9Y5P4 624 aa12.93□□□□□ -0.34
BRD9-203ENST00000475706 MYH15Q9Y2K3 1946 aa12.92□□□□□ -0.34
BRD9-203ENST00000475706 USO1O60763 962 aaKnown RBP12.92□□□□□ -0.34
BRD9-203ENST00000475706 FXR2P51116 673 aaKnown RBP eCLIP12.92□□□□□ -0.34
BRD9-203ENST00000475706 ADGRE1Q14246 886 aa12.92□□□□□ -0.34
BRD9-203ENST00000475706 HAUS3Q68CZ6 603 aa12.92□□□□□ -0.34
BRD9-203ENST00000475706 DTHD1Q6ZMT9 781 aa12.92□□□□□ -0.34
BRD9-203ENST00000475706 MAEAQ7L5Y9 396 aa12.92□□□□□ -0.34
BRD9-203ENST00000475706 ZNF410Q86VK4 478 aa12.92□□□□□ -0.34
BRD9-203ENST00000475706 NPAS4Q8IUM7 802 aa12.92□□□□□ -0.34
BRD9-203ENST00000475706 MICALL1Q8N3F8 863 aa12.92□□□□□ -0.34
BRD9-203ENST00000475706 FIBCD1Q8N539 461 aa12.92□□□□□ -0.34
BRD9-203ENST00000475706 PRPF31Q8WWY3 499 aaKnown RBP12.92□□□□□ -0.34
BRD9-203ENST00000475706 PSPC1Q8WXF1 523 aaKnown RBP12.92□□□□□ -0.34
BRD9-203ENST00000475706 SNX21Q969T3 373 aa12.92□□□□□ -0.34
BRD9-203ENST00000475706 NACC1Q96RE7 527 aa12.92□□□□□ -0.34
BRD9-203ENST00000475706 INO80BQ9C086 356 aaPredicted RBP12.92□□□□□ -0.34
BRD9-203ENST00000475706 ATP6V0A4Q9HBG4 840 aa12.92□□□□□ -0.34
BRD9-203ENST00000475706 SZT2Q5T011 3432 aa12.92□□□□□ -0.34
BRD9-203ENST00000475706 EPOPA6NHQ4 379 aa12.91□□□□□ -0.34
BRD9-203ENST00000475706 LAD1O00515 517 aa12.91□□□□□ -0.34
BRD9-203ENST00000475706 GTPBP6O43824 516 aaPredicted RBP12.91□□□□□ -0.34
BRD9-203ENST00000475706 GAS2O43903 313 aaKnown RBP12.91□□□□□ -0.34
BRD9-203ENST00000475706 DGAT1O75907 488 aa12.91□□□□□ -0.34
BRD9-203ENST00000475706 HSP90AA1P07900 732 aaKnown RBP12.91□□□□□ -0.34
BRD9-203ENST00000475706 XRCC6P12956 609 aaKnown RBP eCLIP12.91□□□□□ -0.34
BRD9-203ENST00000475706 RPA1P27694 616 aa12.91□□□□□ -0.34
BRD9-203ENST00000475706 SARSP49591 514 aaKnown RBP12.91□□□□□ -0.34
BRD9-203ENST00000475706 RARRES1P49788 294 aa12.91□□□□□ -0.34
BRD9-203ENST00000475706 ERVK-21P61565 698 aa12.91□□□□□ -0.34
BRD9-203ENST00000475706 LAMTOR4Q0VGL1 99 aa12.91□□□□□ -0.34
BRD9-203ENST00000475706 BTG3Q14201 252 aaPredicted RBP12.91□□□□□ -0.34
BRD9-203ENST00000475706 PDIA5Q14554 519 aa12.91□□□□□ -0.34
BRD9-203ENST00000475706 ZRSR1Q15695 479 aaKnown RBP12.91□□□□□ -0.34
BRD9-203ENST00000475706 CCDC85BQ15834 202 aaPredicted RBP12.91□□□□□ -0.34
BRD9-203ENST00000475706 PAN2Q504Q3 1202 aaKnown RBP12.91□□□□□ -0.34
BRD9-203ENST00000475706 POTEGQ6S5H5 508 aa12.91□□□□□ -0.34
BRD9-203ENST00000475706 SLC24A5Q71RS6 500 aa12.91□□□□□ -0.34
BRD9-203ENST00000475706 CATSPER4Q7RTX7 472 aa12.91□□□□□ -0.34
BRD9-203ENST00000475706 BRAPQ7Z569 592 aa12.91□□□□□ -0.34
BRD9-203ENST00000475706 SP7Q8TDD2 431 aaPredicted RBP12.91□□□□□ -0.34
BRD9-203ENST00000475706 SNX29Q8TEQ0 813 aa12.91□□□□□ -0.34
BRD9-203ENST00000475706 INTS4Q96HW7 963 aaKnown RBP12.91□□□□□ -0.34
BRD9-203ENST00000475706 C17orf80Q9BSJ5 609 aa12.91□□□□□ -0.34
BRD9-203ENST00000475706 XPNPEP1Q9NQW7 623 aa12.91□□□□□ -0.34
BRD9-203ENST00000475706 RGS18Q9NS28 235 aa12.91□□□□□ -0.34
BRD9-203ENST00000475706 C1orf112Q9NSG2 853 aa12.91□□□□□ -0.34
BRD9-203ENST00000475706 ARHGEF35A5YM69 484 aa12.9□□□□□ -0.34
BRD9-203ENST00000475706 PP2D1A8MPX8 630 aa12.9□□□□□ -0.34
BRD9-203ENST00000475706 ASAP2O43150 1006 aa12.9□□□□□ -0.34
BRD9-203ENST00000475706 DGKIO75912 1065 aa12.9□□□□□ -0.34
BRD9-203ENST00000475706 SYT1P21579 422 aa12.9□□□□□ -0.34
BRD9-203ENST00000475706 SFPQP23246 707 aaKnown RBP eCLIP12.9□□□□□ -0.34
BRD9-203ENST00000475706 PRPHP41219 470 aa12.9□□□□□ -0.34
BRD9-203ENST00000475706 GATMP50440 423 aa12.9□□□□□ -0.34
BRD9-203ENST00000475706 ATP2C1P98194 919 aaPredicted RBP12.9□□□□□ -0.34
BRD9-203ENST00000475706 DSC3Q14574 896 aa12.9□□□□□ -0.34
BRD9-203ENST00000475706 IL17AQ16552 155 aa12.9□□□□□ -0.34
BRD9-203ENST00000475706 KRT79Q5XKE5 535 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms