RNA–Protein interactions for RNA: ENST00000471894.1

PUM1-208, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-208	ENST00000471894	TMOD1	P28289	359 aa		11.65	□□□□□ -0.54
PUM1-208	ENST00000471894	ZNF131	P52739	623 aa		11.65	□□□□□ -0.54
PUM1-208	ENST00000471894	ACLY	P53396	1101 aa		11.65	□□□□□ -0.54
PUM1-208	ENST00000471894	SOX10	P56693	466 aa		11.65	□□□□□ -0.54
PUM1-208	ENST00000471894	EHHADH	Q08426	723 aa		11.65	□□□□□ -0.54
PUM1-208	ENST00000471894	STK4	Q13043	487 aa		11.65	□□□□□ -0.54
PUM1-208	ENST00000471894	DPCR1	Q3MIW9	517 aa		11.65	□□□□□ -0.54
PUM1-208	ENST00000471894	ANO6	Q4KMQ2	910 aa		11.65	□□□□□ -0.54
PUM1-208	ENST00000471894	IER5	Q5VY09	327 aa		11.65	□□□□□ -0.54
PUM1-208	ENST00000471894	MTHFD1L	Q6UB35	978 aa		11.65	□□□□□ -0.54
PUM1-208	ENST00000471894	FAM178B	Q8IXR5	827 aa		11.65	□□□□□ -0.54
PUM1-208	ENST00000471894	SMYD4	Q8IYR2	804 aa	Predicted RBP	11.65	□□□□□ -0.54
PUM1-208	ENST00000471894	DAW1	Q8N136	415 aa		11.65	□□□□□ -0.54
PUM1-208	ENST00000471894	LRRC71	Q8N4P6	559 aa		11.65	□□□□□ -0.54
PUM1-208	ENST00000471894	ARMC5	Q96C12	935 aa		11.65	□□□□□ -0.54
PUM1-208	ENST00000471894	ZNF333	Q96JL9	665 aa		11.65	□□□□□ -0.54
PUM1-208	ENST00000471894	IFT74	Q96LB3	600 aa		11.65	□□□□□ -0.54
PUM1-208	ENST00000471894	NAT10	Q9H0A0	1025 aa	Known RBP	11.65	□□□□□ -0.54
PUM1-208	ENST00000471894	POLR3F	Q9H1D9	316 aa	Predicted RBP	11.65	□□□□□ -0.54
PUM1-208	ENST00000471894	DNAJC25	Q9H1X3	360 aa		11.65	□□□□□ -0.54
PUM1-208	ENST00000471894	MRPL44	Q9H9J2	332 aa	Known RBP	11.65	□□□□□ -0.54
PUM1-208	ENST00000471894	HDAC6	Q9UBN7	1215 aa		11.65	□□□□□ -0.54
PUM1-208	ENST00000471894	SEL1L	Q9UBV2	794 aa		11.65	□□□□□ -0.54
PUM1-208	ENST00000471894	DACH1	Q9UI36	760 aa		11.65	□□□□□ -0.54
PUM1-208	ENST00000471894	GDA	Q9Y2T3	454 aa		11.65	□□□□□ -0.54
PUM1-208	ENST00000471894	IGKV6-21	A0A0C4DH24	114 aa		11.64	□□□□□ -0.55
PUM1-208	ENST00000471894	C17orf102	A2RUQ5	167 aa		11.64	□□□□□ -0.55
PUM1-208	ENST00000471894	CCDC169	A6NNP5	214 aa		11.64	□□□□□ -0.55
PUM1-208	ENST00000471894	C22orf31	O95567	290 aa		11.64	□□□□□ -0.55
PUM1-208	ENST00000471894	TFRC	P02786	760 aa	Known RBP	11.64	□□□□□ -0.55
PUM1-208	ENST00000471894	ARL2	P36404	184 aa		11.64	□□□□□ -0.55
PUM1-208	ENST00000471894	PRCP	P42785	496 aa		11.64	□□□□□ -0.55
PUM1-208	ENST00000471894	SMTN	P53814	917 aa		11.64	□□□□□ -0.55
PUM1-208	ENST00000471894	PEX3	P56589	373 aa		11.64	□□□□□ -0.55
PUM1-208	ENST00000471894	DMP1	Q13316	513 aa	Predicted RBP	11.64	□□□□□ -0.55
PUM1-208	ENST00000471894	STIM1	Q13586	685 aa		11.64	□□□□□ -0.55
PUM1-208	ENST00000471894	FAM47C	Q5HY64	1035 aa		11.64	□□□□□ -0.55
PUM1-208	ENST00000471894	MARCH8	Q5T0T0	291 aa		11.64	□□□□□ -0.55
PUM1-208	ENST00000471894	L1TD1	Q5T7N2	865 aa	Known RBP	11.64	□□□□□ -0.55
PUM1-208	ENST00000471894	NFRKB	Q6P4R8	1299 aa		11.64	□□□□□ -0.55
PUM1-208	ENST00000471894	LMBR1	Q8WVP7	490 aa		11.64	□□□□□ -0.55
PUM1-208	ENST00000471894	PRPF31	Q8WWY3	499 aa	Known RBP	11.64	□□□□□ -0.55
PUM1-208	ENST00000471894	ZBTB10	Q96DT7	871 aa		11.64	□□□□□ -0.55
PUM1-208	ENST00000471894	GLT1D1	Q96MS3	346 aa		11.64	□□□□□ -0.55
PUM1-208	ENST00000471894	C17orf75	Q9HAS0	396 aa		11.64	□□□□□ -0.55
PUM1-208	ENST00000471894	OLFML3	Q9NRN5	406 aa		11.64	□□□□□ -0.55
PUM1-208	ENST00000471894	SUCLA2	Q9P2R7	463 aa	Predicted RBP	11.64	□□□□□ -0.55
PUM1-208	ENST00000471894	KCNG1	Q9UIX4	513 aa		11.64	□□□□□ -0.55
PUM1-208	ENST00000471894	OGDHL	Q9ULD0	1010 aa		11.64	□□□□□ -0.55
PUM1-208	ENST00000471894	MAPK8IP1	Q9UQF2	711 aa		11.64	□□□□□ -0.55
PUM1-208	ENST00000471894	PCDHA2	Q9Y5H9	948 aa		11.64	□□□□□ -0.55
PUM1-208	ENST00000471894	FRMPD3	Q5JV73	1810 aa		11.63	□□□□□ -0.55
PUM1-208	ENST00000471894	PPP1R3G	B7ZBB8	358 aa		11.63	□□□□□ -0.55
PUM1-208	ENST00000471894	DNM1L	O00429	736 aa		11.63	□□□□□ -0.55
PUM1-208	ENST00000471894	ASAP2	O43150	1006 aa		11.63	□□□□□ -0.55
PUM1-208	ENST00000471894	GCNT3	O95395	438 aa		11.63	□□□□□ -0.55
PUM1-208	ENST00000471894	SGPL1	O95470	568 aa		11.63	□□□□□ -0.55
PUM1-208	ENST00000471894	CAVIN2	O95810	425 aa		11.63	□□□□□ -0.55
PUM1-208	ENST00000471894	GJB1	P08034	283 aa		11.63	□□□□□ -0.55
PUM1-208	ENST00000471894	MAPT	P10636	758 aa	Known RBP	11.63	□□□□□ -0.55
PUM1-208	ENST00000471894	CD44	P16070	742 aa	Known RBP	11.63	□□□□□ -0.55
PUM1-208	ENST00000471894	NMT1	P30419	496 aa	Known RBP	11.63	□□□□□ -0.55
PUM1-208	ENST00000471894	PPP1R2	P41236	205 aa		11.63	□□□□□ -0.55
PUM1-208	ENST00000471894	CLCN3	P51790	818 aa		11.63	□□□□□ -0.55
PUM1-208	ENST00000471894	RTP1	P59025	263 aa		11.63	□□□□□ -0.55
PUM1-208	ENST00000471894	ZNF200	P98182	395 aa	Predicted RBP	11.63	□□□□□ -0.55
PUM1-208	ENST00000471894	MKRN4P	Q13434	485 aa	Predicted RBP	11.63	□□□□□ -0.55
PUM1-208	ENST00000471894	DRP2	Q13474	957 aa		11.63	□□□□□ -0.55
PUM1-208	ENST00000471894	ITGA7	Q13683	1181 aa		11.63	□□□□□ -0.55
PUM1-208	ENST00000471894	MXD4	Q14582	209 aa	Predicted RBP	11.63	□□□□□ -0.55
PUM1-208	ENST00000471894	PPP2R5A	Q15172	486 aa		11.63	□□□□□ -0.55
PUM1-208	ENST00000471894	KLHL10	Q6JEL2	608 aa		11.63	□□□□□ -0.55
PUM1-208	ENST00000471894	C11orf57	Q6ZUT1	292 aa	Predicted RBP	11.63	□□□□□ -0.55
PUM1-208	ENST00000471894	STXBP4	Q6ZWJ1	553 aa		11.63	□□□□□ -0.55
PUM1-208	ENST00000471894	ZNF720	Q7Z2F6	126 aa		11.63	□□□□□ -0.55
PUM1-208	ENST00000471894	KIAA0895	Q8NCT3	520 aa		11.63	□□□□□ -0.55
PUM1-208	ENST00000471894	SLC17A8	Q8NDX2	589 aa		11.63	□□□□□ -0.55
PUM1-208	ENST00000471894	PSPC1	Q8WXF1	523 aa	Known RBP	11.63	□□□□□ -0.55
PUM1-208	ENST00000471894	KMT5A	Q9NQR1	393 aa		11.63	□□□□□ -0.55
PUM1-208	ENST00000471894	AKT3	Q9Y243	479 aa		11.63	□□□□□ -0.55
PUM1-208	ENST00000471894	PCDHB13	Q9Y5F0	798 aa		11.63	□□□□□ -0.55
PUM1-208	ENST00000471894	TRIP12	Q14669	1992 aa	Predicted RBP	11.63	□□□□□ -0.55
PUM1-208	ENST00000471894	SCN10A	Q9Y5Y9	1956 aa		11.63	□□□□□ -0.55
PUM1-208	ENST00000471894	HTT	P42858	3142 aa		11.62	□□□□□ -0.55
PUM1-208	ENST00000471894		A0A1W2PQ45	241 aa	Predicted RBP	11.62	□□□□□ -0.55
PUM1-208	ENST00000471894		A0A1W2PQY0	241 aa		11.62	□□□□□ -0.55
PUM1-208	ENST00000471894	MBLAC1	A4D2B0	266 aa	Predicted RBP	11.62	□□□□□ -0.55
PUM1-208	ENST00000471894	LRRIQ4	A6NIV6	560 aa		11.62	□□□□□ -0.55
PUM1-208	ENST00000471894		K7ENM7	598 aa		11.62	□□□□□ -0.55
PUM1-208	ENST00000471894	SLC16A4	O15374	487 aa		11.62	□□□□□ -0.55
PUM1-208	ENST00000471894	TREH	O43280	583 aa		11.62	□□□□□ -0.55
PUM1-208	ENST00000471894	PRPF6	O94906	941 aa	Known RBP	11.62	□□□□□ -0.55
PUM1-208	ENST00000471894	KIF20A	O95235	890 aa		11.62	□□□□□ -0.55
PUM1-208	ENST00000471894	SRGAP2C	P0DJJ0	459 aa		11.62	□□□□□ -0.55
PUM1-208	ENST00000471894	MYB	P10242	640 aa		11.62	□□□□□ -0.55
PUM1-208	ENST00000471894	CYP2C9	P11712	490 aa		11.62	□□□□□ -0.55
PUM1-208	ENST00000471894	GLRA2	P23416	452 aa		11.62	□□□□□ -0.55
PUM1-208	ENST00000471894	NPTX2	P47972	431 aa		11.62	□□□□□ -0.55
PUM1-208	ENST00000471894	ZNF165	P49910	485 aa		11.62	□□□□□ -0.55
PUM1-208	ENST00000471894	ADAM17	P78536	824 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms