RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 CRYGNQ8WXF5 182 aa15.62■□□□□ 0.09
ERCC3-202ENST00000426778 CYP3A7-CYP3A51PA0A087WV96 503 aa15.62■□□□□ 0.09
ERCC3-202ENST00000426778 F8VZ95 297 aa15.62■□□□□ 0.09
ERCC3-202ENST00000426778 POLRMTO00411 1230 aaKnown RBP15.62■□□□□ 0.09
ERCC3-202ENST00000426778 KRT13P13646 458 aa15.62■□□□□ 0.09
ERCC3-202ENST00000426778 CYP3A7P24462 503 aa15.62■□□□□ 0.09
ERCC3-202ENST00000426778 VPS36Q86VN1 386 aa15.62■□□□□ 0.09
ERCC3-202ENST00000426778 OLIG1Q8TAK6 271 aa15.62■□□□□ 0.09
ERCC3-202ENST00000426778 AMFRQ9UKV5 643 aa15.62■□□□□ 0.09
ERCC3-202ENST00000426778 COG5Q9UP83 839 aa15.62■□□□□ 0.09
ERCC3-202ENST00000426778 SNX24Q9Y343 169 aa15.62■□□□□ 0.09
ERCC3-202ENST00000426778 HMGB1P1B2RPK0 211 aaPredicted RBP15.61■□□□□ 0.09
ERCC3-202ENST00000426778 PDE4CQ08493 712 aa15.61■□□□□ 0.09
ERCC3-202ENST00000426778 IFFO1Q0D2I5 559 aa15.61■□□□□ 0.09
ERCC3-202ENST00000426778 ALG3Q92685 438 aa15.61■□□□□ 0.09
ERCC3-202ENST00000426778 TDRD3Q9H7E2 651 aaKnown RBP15.61■□□□□ 0.09
ERCC3-202ENST00000426778 TAF1LQ8IZX4 1826 aa15.61■□□□□ 0.09
ERCC3-202ENST00000426778 SLITRK3O94933 977 aa15.61■□□□□ 0.09
ERCC3-202ENST00000426778 RPL13P26373 211 aaKnown RBP15.61■□□□□ 0.09
ERCC3-202ENST00000426778 PLTPP55058 493 aa15.61■□□□□ 0.09
ERCC3-202ENST00000426778 SF3B2Q13435 895 aaKnown RBP15.61■□□□□ 0.09
ERCC3-202ENST00000426778 KIAA1755Q5JYT7 1200 aa15.61■□□□□ 0.09
ERCC3-202ENST00000426778 SYDE2Q5VT97 1194 aa15.61■□□□□ 0.09
ERCC3-202ENST00000426778 CYFIP2Q96F07 1278 aa15.61■□□□□ 0.09
ERCC3-202ENST00000426778 ZBTB21Q9ULJ3 1066 aa15.61■□□□□ 0.09
ERCC3-202ENST00000426778 STXBP5LQ9Y2K9 1186 aa15.61■□□□□ 0.09
ERCC3-202ENST00000426778 SLCO1A2P46721 670 aa15.61■□□□□ 0.09
ERCC3-202ENST00000426778 FMO5P49326 533 aa15.61■□□□□ 0.09
ERCC3-202ENST00000426778 MSL1Q68DK7 614 aa15.61■□□□□ 0.09
ERCC3-202ENST00000426778 MMS22LQ6ZRQ5 1243 aa15.61■□□□□ 0.09
ERCC3-202ENST00000426778 TMC3Q7Z5M5 1100 aa15.61■□□□□ 0.09
ERCC3-202ENST00000426778 KAT5Q92993 513 aa15.61■□□□□ 0.09
ERCC3-202ENST00000426778 ZNF622Q969S3 477 aaKnown RBP eCLIP15.61■□□□□ 0.091e-6■■□□□ 12.7
ERCC3-202ENST00000426778 BTBD6Q96KE9 485 aa15.61■□□□□ 0.09
ERCC3-202ENST00000426778 FAM84AQ96KN4 292 aa15.61■□□□□ 0.09
ERCC3-202ENST00000426778 FOXN3O00409 490 aaPredicted RBP15.6■□□□□ 0.09
ERCC3-202ENST00000426778 SOX5P35711 763 aa15.6■□□□□ 0.09
ERCC3-202ENST00000426778 PRKCIP41743 596 aa15.6■□□□□ 0.09
ERCC3-202ENST00000426778 IFI16Q16666 785 aaKnown RBP15.6■□□□□ 0.09
ERCC3-202ENST00000426778 ABCB5Q2M3G0 1257 aa15.6■□□□□ 0.09
ERCC3-202ENST00000426778 ODR4Q5SWX8 454 aa15.6■□□□□ 0.09
ERCC3-202ENST00000426778 LRCH2Q5VUJ6 765 aa15.6■□□□□ 0.09
ERCC3-202ENST00000426778 FOXR2Q6PJQ5 311 aa15.6■□□□□ 0.09
ERCC3-202ENST00000426778 B4GALNT4Q76KP1 1039 aa15.6■□□□□ 0.09
ERCC3-202ENST00000426778 CD302Q8IX05 232 aa15.6■□□□□ 0.09
ERCC3-202ENST00000426778 CTNNBL1Q8WYA6 563 aaPredicted RBP15.6■□□□□ 0.09
ERCC3-202ENST00000426778 KRT35Q92764 455 aa15.6■□□□□ 0.09
ERCC3-202ENST00000426778 C18orf8Q96DM3 657 aa15.6■□□□□ 0.09
ERCC3-202ENST00000426778 PNMA2Q9UL42 364 aa15.6■□□□□ 0.09
ERCC3-202ENST00000426778 SCAF8Q9UPN6 1271 aaKnown RBP15.6■□□□□ 0.09
ERCC3-202ENST00000426778 BZW2Q9Y6E2 419 aaKnown RBP15.6■□□□□ 0.09
ERCC3-202ENST00000426778 FOCADQ5VW36 1801 aa15.6■□□□□ 0.09
ERCC3-202ENST00000426778 TMEM150BA6NC51 233 aa15.6■□□□□ 0.09
ERCC3-202ENST00000426778 CAND2O75155 1236 aa15.6■□□□□ 0.09
ERCC3-202ENST00000426778 CPP00450 1065 aa15.6■□□□□ 0.09
ERCC3-202ENST00000426778 GUCY2CP25092 1073 aa15.6■□□□□ 0.09
ERCC3-202ENST00000426778 SREBF1P36956 1147 aa15.6■□□□□ 0.09
ERCC3-202ENST00000426778 CUL1Q13616 776 aa15.6■□□□□ 0.09
ERCC3-202ENST00000426778 PHLDB3Q6NSJ2 640 aa15.6■□□□□ 0.09
ERCC3-202ENST00000426778 ARHGAP27Q6ZUM4 889 aa15.6■□□□□ 0.09
ERCC3-202ENST00000426778 SP8Q8IXZ3 490 aa15.6■□□□□ 0.09
ERCC3-202ENST00000426778 MBOAT7Q96N66 472 aa15.6■□□□□ 0.09
ERCC3-202ENST00000426778 GPR88Q9GZN0 384 aa15.6■□□□□ 0.09
ERCC3-202ENST00000426778 CALCAP01258 141 aa15.59■□□□□ 0.09
ERCC3-202ENST00000426778 PSMC2P35998 433 aaKnown RBP15.59■□□□□ 0.09
ERCC3-202ENST00000426778 AP3B2Q13367 1082 aa15.59■□□□□ 0.09
ERCC3-202ENST00000426778 FAM178BQ8IXR5 827 aa15.59■□□□□ 0.09
ERCC3-202ENST00000426778 SYCP3Q8IZU3 236 aa15.59■□□□□ 0.09
ERCC3-202ENST00000426778 ACER1Q8TDN7 264 aa15.59■□□□□ 0.09
ERCC3-202ENST00000426778 LRRC45Q96CN5 670 aa15.59■□□□□ 0.09
ERCC3-202ENST00000426778 HES6Q96HZ4 224 aa15.59■□□□□ 0.09
ERCC3-202ENST00000426778 PTPN22Q9Y2R2 807 aa15.59■□□□□ 0.09
ERCC3-202ENST00000426778 UTP11Q9Y3A2 253 aaKnown RBP15.59■□□□□ 0.09
ERCC3-202ENST00000426778 EXOC3O60645 756 aa15.59■□□□□ 0.09
ERCC3-202ENST00000426778 EYA4O95677 639 aa15.59■□□□□ 0.09
ERCC3-202ENST00000426778 HOXA10P31260 410 aaPredicted RBP15.59■□□□□ 0.09
ERCC3-202ENST00000426778 Q4G0T1 1027 aa15.59■□□□□ 0.09
ERCC3-202ENST00000426778 ATP8B4Q8TF62 1192 aa15.59■□□□□ 0.09
ERCC3-202ENST00000426778 RAPGEF5Q92565 580 aa15.59■□□□□ 0.09
ERCC3-202ENST00000426778 BORCS6Q96GS4 357 aa15.59■□□□□ 0.09
ERCC3-202ENST00000426778 INTS2Q9H0H0 1204 aaKnown RBP15.59■□□□□ 0.09
ERCC3-202ENST00000426778 CD248Q9HCU0 757 aa15.59■□□□□ 0.09
ERCC3-202ENST00000426778 DDX20Q9UHI6 824 aaKnown RBP15.59■□□□□ 0.09
ERCC3-202ENST00000426778 SLC12A6Q9UHW9 1150 aa15.59■□□□□ 0.09
ERCC3-202ENST00000426778 MYH11P35749 1972 aa15.58■□□□□ 0.09
ERCC3-202ENST00000426778 FAM107AO95990 144 aa15.58■□□□□ 0.09
ERCC3-202ENST00000426778 ARP10275 920 aa15.58■□□□□ 0.09
ERCC3-202ENST00000426778 BMP3P12645 472 aa15.58■□□□□ 0.09
ERCC3-202ENST00000426778 TNFAIP3P21580 790 aa15.58■□□□□ 0.09
ERCC3-202ENST00000426778 FNTAP49354 379 aa15.58■□□□□ 0.09
ERCC3-202ENST00000426778 C10orf76Q5T2E6 689 aa15.58■□□□□ 0.09
ERCC3-202ENST00000426778 SLFN11Q7Z7L1 901 aa15.58■□□□□ 0.09
ERCC3-202ENST00000426778 DCAF4Q8WV16 495 aa15.58■□□□□ 0.09
ERCC3-202ENST00000426778 CRAMP1Q96RY5 1269 aa15.58■□□□□ 0.09
ERCC3-202ENST00000426778 PARVGQ9HBI0 331 aa15.58■□□□□ 0.09
ERCC3-202ENST00000426778 METTL14Q9HCE5 456 aaKnown RBP15.58■□□□□ 0.09
ERCC3-202ENST00000426778 SUCLA2Q9P2R7 463 aaPredicted RBP15.58■□□□□ 0.09
ERCC3-202ENST00000426778 PI4KBQ9UBF8 816 aa15.58■□□□□ 0.09
ERCC3-202ENST00000426778 PRR12Q9ULL5 1215 aa15.58■□□□□ 0.09
ERCC3-202ENST00000426778 TCRBV7S2A1N4TA0A589 114 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms