RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 TMC6Q7Z403 805 aa19.11■□□□□ 0.65
CLDN4-201ENST00000340958 FILIP1Q7Z7B0 1213 aa19.11■□□□□ 0.65
CLDN4-201ENST00000340958 SYCP3Q8IZU3 236 aa19.11■□□□□ 0.65
CLDN4-201ENST00000340958 RAET1EQ8TD07 263 aa19.11■□□□□ 0.65
CLDN4-201ENST00000340958 AFG1LQ8WV93 481 aa19.11■□□□□ 0.65
CLDN4-201ENST00000340958 BBXQ8WY36 941 aaPredicted RBP19.11■□□□□ 0.65
CLDN4-201ENST00000340958 USP6NLQ92738 828 aa19.11■□□□□ 0.65
CLDN4-201ENST00000340958 NIFKQ9BYG3 293 aaKnown RBP19.11■□□□□ 0.65
CLDN4-201ENST00000340958 GJD2Q9UKL4 321 aa19.11■□□□□ 0.65
CLDN4-201ENST00000340958 N4BP3O15049 544 aa19.1■□□□□ 0.65
CLDN4-201ENST00000340958 PRKCSHP14314 528 aaPredicted RBP19.1■□□□□ 0.65
CLDN4-201ENST00000340958 EMC2Q15006 297 aa19.1■□□□□ 0.65
CLDN4-201ENST00000340958 KRT31Q15323 416 aa19.1■□□□□ 0.65
CLDN4-201ENST00000340958 SLC17A8Q8NDX2 589 aa19.1■□□□□ 0.65
CLDN4-201ENST00000340958 ZNF507Q8TCN5 953 aa19.1■□□□□ 0.65
CLDN4-201ENST00000340958 IFT74Q96LB3 600 aa19.1■□□□□ 0.65
CLDN4-201ENST00000340958 CNOT6LQ96LI5 555 aaKnown RBP19.1■□□□□ 0.65
CLDN4-201ENST00000340958 TAB2Q9NYJ8 693 aa19.1■□□□□ 0.65
CLDN4-201ENST00000340958 ERAP1Q9NZ08 941 aa19.1■□□□□ 0.65
CLDN4-201ENST00000340958 LIMA1Q9UHB6 759 aaKnown RBP19.1■□□□□ 0.65
CLDN4-201ENST00000340958 EMSYQ7Z589 1322 aa19.1■□□□□ 0.65
CLDN4-201ENST00000340958 CCDC85CA6NKD9 419 aa19.09■□□□□ 0.65
CLDN4-201ENST00000340958 CAPN15O75808 1086 aa19.09■□□□□ 0.65
CLDN4-201ENST00000340958 RFC5P40937 340 aa19.09■□□□□ 0.65
CLDN4-201ENST00000340958 ALCAMQ13740 583 aa19.09■□□□□ 0.65
CLDN4-201ENST00000340958 SLC9C1Q4G0N8 1177 aa19.09■□□□□ 0.65
CLDN4-201ENST00000340958 SH3TC2Q8TF17 1288 aa19.09■□□□□ 0.65
CLDN4-201ENST00000340958 EMID1Q96A84 441 aaPredicted RBP19.09■□□□□ 0.65
CLDN4-201ENST00000340958 POLR3FQ9H1D9 316 aaPredicted RBP19.09■□□□□ 0.65
CLDN4-201ENST00000340958 VPS16Q9H269 839 aa19.09■□□□□ 0.65
CLDN4-201ENST00000340958 KCTD10Q9H3F6 313 aa19.09■□□□□ 0.65
CLDN4-201ENST00000340958 UBE4BO95155 1302 aa19.09■□□□□ 0.65
CLDN4-201ENST00000340958 MYH9P35579 1960 aaKnown RBP19.09■□□□□ 0.65
CLDN4-201ENST00000340958 MAPTP10636 758 aaKnown RBP19.09■□□□□ 0.65
CLDN4-201ENST00000340958 SOX10P56693 466 aa19.09■□□□□ 0.65
CLDN4-201ENST00000340958 TBC1D8BQ0IIM8 1120 aa19.09■□□□□ 0.65
CLDN4-201ENST00000340958 ADAM9Q13443 819 aa19.09■□□□□ 0.65
CLDN4-201ENST00000340958 BMT2Q1RMZ1 405 aa19.09■□□□□ 0.65
CLDN4-201ENST00000340958 ATP8B4Q8TF62 1192 aa19.09■□□□□ 0.65
CLDN4-201ENST00000340958 C17orf75Q9HAS0 396 aa19.09■□□□□ 0.65
CLDN4-201ENST00000340958 KMT5AQ9NQR1 393 aa19.09■□□□□ 0.65
CLDN4-201ENST00000340958 TYW1Q9NV66 732 aaKnown RBP19.09■□□□□ 0.65
CLDN4-201ENST00000340958 PDXKO00764 312 aa19.08■□□□□ 0.64
CLDN4-201ENST00000340958 CETN3O15182 167 aa19.08■□□□□ 0.64
CLDN4-201ENST00000340958 SLC16A4O15374 487 aa19.08■□□□□ 0.64
CLDN4-201ENST00000340958 RPL13P26373 211 aaKnown RBP19.08■□□□□ 0.64
CLDN4-201ENST00000340958 COPB1P53618 953 aaKnown RBP19.08■□□□□ 0.64
CLDN4-201ENST00000340958 PLCB4Q15147 1175 aa19.08■□□□□ 0.64
CLDN4-201ENST00000340958 CCDC40Q4G0X9 1142 aa19.08■□□□□ 0.64
CLDN4-201ENST00000340958 FOXR2Q6PJQ5 311 aa19.08■□□□□ 0.64
CLDN4-201ENST00000340958 HS2ST1Q7LGA3 356 aa19.08■□□□□ 0.64
CLDN4-201ENST00000340958 KSR1Q8IVT5 923 aa19.08■□□□□ 0.64
CLDN4-201ENST00000340958 KCNG1Q9UIX4 513 aa19.08■□□□□ 0.64
CLDN4-201ENST00000340958 ZNF215Q9UL58 517 aaPredicted RBP19.08■□□□□ 0.64
CLDN4-201ENST00000340958 A0A1B0GTH6 734 aa19.07■□□□□ 0.64
CLDN4-201ENST00000340958 DYNC1LI2O43237 492 aaPredicted RBP19.07■□□□□ 0.64
CLDN4-201ENST00000340958 PPFIA4O75335 1185 aa19.07■□□□□ 0.64
CLDN4-201ENST00000340958 LGALS2P05162 132 aa19.07■□□□□ 0.64
CLDN4-201ENST00000340958 NR2F2P24468 414 aa19.07■□□□□ 0.64
CLDN4-201ENST00000340958 KCNA1Q09470 495 aa19.07■□□□□ 0.64
CLDN4-201ENST00000340958 IRF5Q13568 498 aa19.07■□□□□ 0.64
CLDN4-201ENST00000340958 DGKDQ16760 1214 aa19.07■□□□□ 0.64
CLDN4-201ENST00000340958 EDRF1Q3B7T1 1238 aa19.07■□□□□ 0.64
CLDN4-201ENST00000340958 MFSD14CQ5VZR4 134 aa19.07■□□□□ 0.64
CLDN4-201ENST00000340958 CCDC186Q7Z3E2 898 aa19.07■□□□□ 0.64
CLDN4-201ENST00000340958 HAUS6Q7Z4H7 955 aa19.07■□□□□ 0.64
CLDN4-201ENST00000340958 IRF2BP1Q8IU81 584 aa19.07■□□□□ 0.64
CLDN4-201ENST00000340958 EXOC8Q8IYI6 725 aa19.07■□□□□ 0.64
CLDN4-201ENST00000340958 TMEM143Q96AN5 459 aa19.07■□□□□ 0.64
CLDN4-201ENST00000340958 ARMC5Q96C12 935 aa19.07■□□□□ 0.64
CLDN4-201ENST00000340958 CEP63Q96MT8 703 aa19.07■□□□□ 0.64
CLDN4-201ENST00000340958 TUBGCP2Q9BSJ2 902 aa19.07■□□□□ 0.64
CLDN4-201ENST00000340958 TMEM206Q9H813 350 aa19.07■□□□□ 0.64
CLDN4-201ENST00000340958 NRBP1Q9UHY1 535 aa19.07■□□□□ 0.64
CLDN4-201ENST00000340958 FAM184BQ9ULE4 1060 aa19.07■□□□□ 0.64
CLDN4-201ENST00000340958 PPME1Q9Y570 386 aa19.07■□□□□ 0.64
CLDN4-201ENST00000340958 ADCY3O60266 1144 aa19.07■□□□□ 0.64
CLDN4-201ENST00000340958 ZNF286BP0CG31 522 aa19.07■□□□□ 0.64
CLDN4-201ENST00000340958 ELNP15502 786 aa19.07■□□□□ 0.64
CLDN4-201ENST00000340958 GRK4P32298 578 aa19.07■□□□□ 0.64
CLDN4-201ENST00000340958 NR1I3Q14994 352 aa19.07■□□□□ 0.64
CLDN4-201ENST00000340958 ZCWPW2Q504Y3 356 aa19.07■□□□□ 0.64
CLDN4-201ENST00000340958 HS1BP3Q53T59 392 aa19.07■□□□□ 0.64
CLDN4-201ENST00000340958 ACCSQ96QU6 501 aa19.07■□□□□ 0.64
CLDN4-201ENST00000340958 FIZ1Q96SL8 496 aa19.07■□□□□ 0.64
CLDN4-201ENST00000340958 NOC4LQ9BVI4 516 aaKnown RBP19.07■□□□□ 0.64
CLDN4-201ENST00000340958 SUGCTQ9HAC7 445 aa19.07■□□□□ 0.64
CLDN4-201ENST00000340958 XPNPEP1Q9NQW7 623 aa19.07■□□□□ 0.64
CLDN4-201ENST00000340958 IMPACTQ9P2X3 320 aa19.07■□□□□ 0.64
CLDN4-201ENST00000340958 TRAF3IP3Q9Y228 551 aa19.07■□□□□ 0.64
CLDN4-201ENST00000340958 HBP1O60381 514 aa19.06■□□□□ 0.64
CLDN4-201ENST00000340958 GNA14O95837 355 aa19.06■□□□□ 0.64
CLDN4-201ENST00000340958 HOXD13P35453 343 aa19.06■□□□□ 0.64
CLDN4-201ENST00000340958 NPTX2P47972 431 aa19.06■□□□□ 0.64
CLDN4-201ENST00000340958 PTPN21Q16825 1174 aa19.06■□□□□ 0.64
CLDN4-201ENST00000340958 BRDTQ58F21 947 aaPredicted RBP19.06■□□□□ 0.64
CLDN4-201ENST00000340958 VSTM4Q8IW00 320 aa19.06■□□□□ 0.64
CLDN4-201ENST00000340958 GOLGA5Q8TBA6 731 aa19.06■□□□□ 0.64
CLDN4-201ENST00000340958 AP5M1Q9H0R1 490 aa19.06■□□□□ 0.64
CLDN4-201ENST00000340958 GBP3Q9H0R5 595 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms