RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 LRFN2Q9ULH4 789 aa30.89■■■□□ 2.54
ATPAF1-201ENST00000329231 ADGRA3Q8IWK6 1321 aa30.89■■■□□ 2.54
ATPAF1-201ENST00000329231 MGEA5O60502 916 aa30.88■■■□□ 2.53
ATPAF1-201ENST00000329231 LPXNO60711 386 aa30.88■■■□□ 2.53
ATPAF1-201ENST00000329231 LYPLA2O95372 231 aa30.88■■■□□ 2.53
ATPAF1-201ENST00000329231 OR52Z1P0C646 297 aa30.88■■■□□ 2.53
ATPAF1-201ENST00000329231 DARSP14868 501 aaKnown RBP30.88■■■□□ 2.53
ATPAF1-201ENST00000329231 POLGP54098 1239 aaPredicted RBP30.88■■■□□ 2.53
ATPAF1-201ENST00000329231 SLC24A5Q71RS6 500 aa30.88■■■□□ 2.53
ATPAF1-201ENST00000329231 MICALL1Q8N3F8 863 aa30.88■■■□□ 2.53
ATPAF1-201ENST00000329231 GDPD5Q8WTR4 605 aa30.88■■■□□ 2.53
ATPAF1-201ENST00000329231 ZNF689Q96CS4 500 aaPredicted RBP30.88■■■□□ 2.53
ATPAF1-201ENST00000329231 GCOM2Q9BZD3 368 aaPredicted RBP30.88■■■□□ 2.53
ATPAF1-201ENST00000329231 RC3H2Q9HBD1 1191 aaKnown RBP30.88■■■□□ 2.53
ATPAF1-201ENST00000329231 ZSCAN21Q9Y5A6 473 aaPredicted RBP30.88■■■□□ 2.53
ATPAF1-201ENST00000329231 GJB2P29033 226 aa30.87■■■□□ 2.53
ATPAF1-201ENST00000329231 BTG3Q14201 252 aaPredicted RBP30.87■■■□□ 2.53
ATPAF1-201ENST00000329231 EPC2Q52LR7 807 aa30.87■■■□□ 2.53
ATPAF1-201ENST00000329231 XKR9Q5GH70 373 aa30.87■■■□□ 2.53
ATPAF1-201ENST00000329231 TMEM192Q8IY95 271 aa30.87■■■□□ 2.53
ATPAF1-201ENST00000329231 ZNF579Q8NAF0 562 aaKnown RBP30.87■■■□□ 2.53
ATPAF1-201ENST00000329231 DHX33Q9H6R0 707 aaKnown RBP30.87■■■□□ 2.53
ATPAF1-201ENST00000329231 LMCD1Q9NZU5 365 aa30.87■■■□□ 2.53
ATPAF1-201ENST00000329231 SMC3Q9UQE7 1217 aa30.87■■■□□ 2.53
ATPAF1-201ENST00000329231 PCDHB7Q9Y5E2 793 aa30.87■■■□□ 2.53
ATPAF1-201ENST00000329231 POTEMA6NI47 508 aa30.86■■■□□ 2.53
ATPAF1-201ENST00000329231 ZNF410Q86VK4 478 aa30.86■■■□□ 2.53
ATPAF1-201ENST00000329231 RHPN2Q8IUC4 686 aa30.86■■■□□ 2.53
ATPAF1-201ENST00000329231 RWDD3Q9Y3V2 267 aa30.86■■■□□ 2.53
ATPAF1-201ENST00000329231 EYSQ5T1H1 3165 aa30.85■■■□□ 2.53
ATPAF1-201ENST00000329231 GAS2O43903 313 aaKnown RBP30.85■■■□□ 2.53
ATPAF1-201ENST00000329231 ZSCAN20P17040 1043 aaPredicted RBP30.85■■■□□ 2.53
ATPAF1-201ENST00000329231 DSC3Q14574 896 aa30.85■■■□□ 2.53
ATPAF1-201ENST00000329231 INO80BQ9C086 356 aaPredicted RBP30.85■■■□□ 2.53
ATPAF1-201ENST00000329231 ANKEF1Q9NU02 776 aa30.85■■■□□ 2.53
ATPAF1-201ENST00000329231 C9IYK1 514 aa30.84■■■□□ 2.53
ATPAF1-201ENST00000329231 H3BQV1 296 aa30.84■■■□□ 2.53
ATPAF1-201ENST00000329231 ZBTB39O15060 712 aa30.84■■■□□ 2.53
ATPAF1-201ENST00000329231 TECP42680 631 aa30.84■■■□□ 2.53
ATPAF1-201ENST00000329231 MCTP1Q6DN14 999 aa30.84■■■□□ 2.53
ATPAF1-201ENST00000329231 CMTR2Q8IYT2 770 aaKnown RBP30.84■■■□□ 2.53
ATPAF1-201ENST00000329231 A0A087WZ62 844 aa30.83■■■□□ 2.53
ATPAF1-201ENST00000329231 IBSPP21815 317 aaPredicted RBP30.83■■■□□ 2.53
ATPAF1-201ENST00000329231 EMC2Q15006 297 aa30.83■■■□□ 2.53
ATPAF1-201ENST00000329231 ERMNQ8TAM6 284 aa30.83■■■□□ 2.53
ATPAF1-201ENST00000329231 TCP11Q8WWU5 503 aa30.83■■■□□ 2.53
ATPAF1-201ENST00000329231 PSPC1Q8WXF1 523 aaKnown RBP30.83■■■□□ 2.53
ATPAF1-201ENST00000329231 CCDC43Q96MW1 224 aaKnown RBP30.83■■■□□ 2.53
ATPAF1-201ENST00000329231 FDXACB1Q9BRP7 624 aaPredicted RBP30.83■■■□□ 2.53
ATPAF1-201ENST00000329231 COL4A3BPQ9Y5P4 624 aa30.83■■■□□ 2.53
ATPAF1-201ENST00000329231 FAM189BP81408 668 aa30.82■■■□□ 2.52
ATPAF1-201ENST00000329231 CLP1Q92989 425 aaKnown RBP30.82■■■□□ 2.52
ATPAF1-201ENST00000329231 TMEM143Q96AN5 459 aa30.82■■■□□ 2.52
ATPAF1-201ENST00000329231 NLRP4Q96MN2 994 aa30.82■■■□□ 2.52
ATPAF1-201ENST00000329231 TUFT1Q9NNX1 390 aa30.82■■■□□ 2.52
ATPAF1-201ENST00000329231 H3BNC9 293 aa30.81■■■□□ 2.52
ATPAF1-201ENST00000329231 RB1P06400 928 aa30.81■■■□□ 2.52
ATPAF1-201ENST00000329231 XRCC6P12956 609 aaKnown RBP eCLIP30.81■■■□□ 2.52
ATPAF1-201ENST00000329231 SFPQP23246 707 aaKnown RBP eCLIP30.81■■■□□ 2.52
ATPAF1-201ENST00000329231 CTNNB1P35222 781 aa30.81■■■□□ 2.52
ATPAF1-201ENST00000329231 TOB1P50616 345 aaPredicted RBP30.81■■■□□ 2.52
ATPAF1-201ENST00000329231 NBR1Q14596 966 aa30.81■■■□□ 2.52
ATPAF1-201ENST00000329231 KSR1Q8IVT5 923 aa30.81■■■□□ 2.52
ATPAF1-201ENST00000329231 C4orf32Q8N8J7 132 aa30.81■■■□□ 2.52
ATPAF1-201ENST00000329231 PRPF31Q8WWY3 499 aaKnown RBP30.81■■■□□ 2.52
ATPAF1-201ENST00000329231 MTRQ99707 1265 aa30.81■■■□□ 2.52
ATPAF1-201ENST00000329231 ELAC1Q9H777 363 aaKnown RBP30.81■■■□□ 2.52
ATPAF1-201ENST00000329231 BMP2KQ9NSY1 1161 aaPredicted RBP30.81■■■□□ 2.52
ATPAF1-201ENST00000329231 TMEM161AQ9NX61 479 aa30.81■■■□□ 2.52
ATPAF1-201ENST00000329231 PRRC2BQ5JSZ5 2229 aaKnown RBP30.81■■■□□ 2.52
ATPAF1-201ENST00000329231 CSDE1O75534 798 aaKnown RBP30.8■■■□□ 2.52
ATPAF1-201ENST00000329231 SPATA31C1P0DKV0 1188 aa30.8■■■□□ 2.52
ATPAF1-201ENST00000329231 FGFR4P22455 802 aa30.8■■■□□ 2.52
ATPAF1-201ENST00000329231 BMPR1AP36894 532 aa30.8■■■□□ 2.52
ATPAF1-201ENST00000329231 GPM6BQ13491 265 aa30.8■■■□□ 2.52
ATPAF1-201ENST00000329231 POLR3CQ9BUI4 534 aaPredicted RBP30.8■■■□□ 2.52
ATPAF1-201ENST00000329231 ATP6V0A4Q9HBG4 840 aa30.8■■■□□ 2.52
ATPAF1-201ENST00000329231 PCDHB6Q9Y5E3 794 aa30.8■■■□□ 2.52
ATPAF1-201ENST00000329231 COL4A4P53420 1690 aaPredicted RBP30.8■■■□□ 2.52
ATPAF1-201ENST00000329231 C5orf67F2Z3F1 127 aa30.79■■■□□ 2.52
ATPAF1-201ENST00000329231 ASAP2O43150 1006 aa30.79■■■□□ 2.52
ATPAF1-201ENST00000329231 DGAT1O75907 488 aa30.79■■■□□ 2.52
ATPAF1-201ENST00000329231 LINC00271P0C7V0 271 aa30.79■■■□□ 2.52
ATPAF1-201ENST00000329231 PTPROQ16827 1216 aa30.79■■■□□ 2.52
ATPAF1-201ENST00000329231 PAN2Q504Q3 1202 aaKnown RBP30.79■■■□□ 2.52
ATPAF1-201ENST00000329231 CATSPER3Q86XQ3 398 aa30.79■■■□□ 2.52
ATPAF1-201ENST00000329231 PIGOQ8TEQ8 1089 aa30.79■■■□□ 2.52
ATPAF1-201ENST00000329231 PRDM6Q9NQX0 595 aa30.79■■■□□ 2.52
ATPAF1-201ENST00000329231 CHST12Q9NRB3 414 aa30.79■■■□□ 2.52
ATPAF1-201ENST00000329231 DACT1Q9NYF0 836 aa30.79■■■□□ 2.52
ATPAF1-201ENST00000329231 RARRES1P49788 294 aa30.78■■■□□ 2.52
ATPAF1-201ENST00000329231 FXR2P51116 673 aaKnown RBP eCLIP30.78■■■□□ 2.52
ATPAF1-201ENST00000329231 LAMTOR4Q0VGL1 99 aa30.78■■■□□ 2.52
ATPAF1-201ENST00000329231 PTGDRQ13258 359 aa30.78■■■□□ 2.52
ATPAF1-201ENST00000329231 SKIV2LQ15477 1246 aaKnown RBP30.78■■■□□ 2.52
ATPAF1-201ENST00000329231 RILPL1Q5EBL4 403 aa30.78■■■□□ 2.52
ATPAF1-201ENST00000329231 LARP1BQ659C4 914 aaKnown RBP30.78■■■□□ 2.52
ATPAF1-201ENST00000329231 C11orf84Q9BUA3 381 aaPredicted RBP30.78■■■□□ 2.52
ATPAF1-201ENST00000329231 IFT122Q9HBG6 1241 aa30.78■■■□□ 2.52
ATPAF1-201ENST00000329231 THEGQ9P2T0 379 aa30.78■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms