RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 OCA2P53949 197 aa-0.04□□□□□ -2.42
snR48snR48 FEX1Q08913 375 aa-0.04□□□□□ -2.42
snR48snR48 MMT2Q08970 484 aa-0.04□□□□□ -2.42
snR48snR48 FEX2Q08991 375 aa-0.04□□□□□ -2.42
snR48snR48 YDL109CQ12103 647 aa-0.04□□□□□ -2.42
snR48snR48 MRX4Q12467 430 aa-0.04□□□□□ -2.42
snR48snR48 TIP20P33891 701 aa-0.05□□□□□ -2.42
snR48snR48 ATM1P40416 690 aa-0.05□□□□□ -2.42
snR48snR48 AIM23P47015 356 aa-0.05□□□□□ -2.42
snR48snR48 DAN1P47178 298 aa-0.05□□□□□ -2.42
snR48snR48 NUP57P48837 541 aa-0.05□□□□□ -2.42
snR48snR48 MIG2P53035 382 aa-0.05□□□□□ -2.42
snR48snR48 SYF2P53277 215 aaPredicted RBP-0.05□□□□□ -2.42
snR48snR48 JJJ1P53863 590 aa-0.05□□□□□ -2.42
snR48snR48 RDS3Q06835 107 aaPredicted RBP-0.05□□□□□ -2.42
snR48snR48 TFC7Q12415 435 aa-0.05□□□□□ -2.42
snR48snR48 ARG3P05150 338 aa-0.06□□□□□ -2.42
snR48snR48 TPK3P05986 398 aa-0.06□□□□□ -2.42
snR48snR48 RPL23AP0CX41 137 aaKnown RBP-0.06□□□□□ -2.42
snR48snR48 RPL23BP0CX42 137 aaKnown RBP-0.06□□□□□ -2.42
snR48snR48 PMT2P31382 759 aa-0.06□□□□□ -2.42
snR48snR48 SMF1P38925 575 aa-0.06□□□□□ -2.42
snR48snR48 VID27P40157 782 aa-0.06□□□□□ -2.42
snR48snR48 CAX4P53223 239 aa-0.06□□□□□ -2.42
snR48snR48 YNL095CP53932 642 aa-0.06□□□□□ -2.42
snR48snR48 INP1Q03694 420 aa-0.06□□□□□ -2.42
snR48snR48 YMR244WQ04018 355 aa-0.06□□□□□ -2.42
snR48snR48 MMR1Q06324 491 aa-0.06□□□□□ -2.42
snR48snR48 IES3Q12345 250 aa-0.06□□□□□ -2.42
snR48snR48 CDC21P06785 304 aa-0.07□□□□□ -2.42
snR48snR48 MIR1P23641 311 aaKnown RBP-0.07□□□□□ -2.42
snR48snR48 INO2P26798 304 aa-0.07□□□□□ -2.42
snR48snR48 RPB9P27999 122 aa-0.07□□□□□ -2.42
snR48snR48 SSH4P32343 579 aa-0.07□□□□□ -2.42
snR48snR48 TAE1P38340 232 aa-0.07□□□□□ -2.42
snR48snR48 RCK1P38622 512 aa-0.07□□□□□ -2.42
snR48snR48 SEC27P41811 889 aaKnown RBP-0.07□□□□□ -2.42
snR48snR48 CAK1P43568 368 aaPredicted RBP-0.07□□□□□ -2.42
snR48snR48 YFR045WP43617 309 aa-0.07□□□□□ -2.42
snR48snR48 PMT5P52867 743 aa-0.07□□□□□ -2.42
snR48snR48 BNI5P53890 448 aaKnown RBP-0.07□□□□□ -2.42
snR48snR48 RPA49Q01080 415 aaPredicted RBP-0.07□□□□□ -2.42
snR48snR48 KAP120Q02932 1032 aa-0.07□□□□□ -2.42
snR48snR48 CGI121Q03705 181 aaKnown RBP-0.07□□□□□ -2.42
snR48snR48 ECM19Q06011 112 aa-0.07□□□□□ -2.42
snR48snR48 YPL264CQ08980 353 aa-0.07□□□□□ -2.42
snR48snR48 SGT2Q12118 346 aaKnown RBP-0.07□□□□□ -2.42
snR48snR48 YAK1P14680 807 aa-0.08□□□□□ -2.42
snR48snR48 FAR1P21268 830 aa-0.08□□□□□ -2.42
snR48snR48 SLM5P25345 492 aaKnown RBP-0.08□□□□□ -2.42
snR48snR48 ARO4P32449 370 aaKnown RBP-0.08□□□□□ -2.42
snR48snR48 NIP1P32497 812 aaKnown RBP-0.08□□□□□ -2.42
snR48snR48 ZRT3P34240 503 aa-0.08□□□□□ -2.42
snR48snR48 YKR015CP36111 568 aa-0.08□□□□□ -2.42
snR48snR48 HIT1P46973 164 aa-0.08□□□□□ -2.42
snR48snR48 RRN9P53437 365 aa-0.08□□□□□ -2.42
snR48snR48 SKO1Q02100 647 aa-0.08□□□□□ -2.42
snR48snR48 YMR130WQ04223 302 aa-0.08□□□□□ -2.42
snR48snR48 DCS1Q06151 350 aa-0.08□□□□□ -2.42
snR48snR48 YDR056CQ12025 205 aa-0.08□□□□□ -2.42
snR48snR48 TY3A-GQ12173 290 aa-0.08□□□□□ -2.42
snR48snR48 TY3A-IQ99219 290 aa-0.08□□□□□ -2.42
snR48snR48 COX3P00420 269 aa-0.09□□□□□ -2.42
snR48snR48 OPI3P05375 206 aa-0.09□□□□□ -2.42
snR48snR48 ITR2P30606 609 aa-0.09□□□□□ -2.42
snR48snR48 CLB6P32943 380 aa-0.09□□□□□ -2.42
snR48snR48 DOA1P36037 715 aa-0.09□□□□□ -2.42
snR48snR48 MED8P38304 223 aa-0.09□□□□□ -2.42
snR48snR48 YIL054WP40524 105 aa-0.09□□□□□ -2.42
snR48snR48 ABM1P47146 123 aa-0.09□□□□□ -2.42
snR48snR48 STE24P47154 453 aa-0.09□□□□□ -2.42
snR48snR48 TOS2P50078 622 aa-0.09□□□□□ -2.42
snR48snR48 YDR018CQ12185 396 aa-0.09□□□□□ -2.42
snR48snR48 CLC1P17891 233 aa-0.1□□□□□ -2.43
snR48snR48 FUI1P38196 639 aa-0.1□□□□□ -2.43
snR48snR48 INM1P38710 295 aa-0.1□□□□□ -2.43
snR48snR48 ARF3P40994 183 aaRIP-Chip data-0.1□□□□□ -2.43not detected
snR48snR48 ERO1Q03103 563 aa-0.1□□□□□ -2.43
snR48snR48 YMR166CQ03829 368 aa-0.1□□□□□ -2.43
snR48snR48 GRX6Q12438 231 aa-0.1□□□□□ -2.43
snR48snR48 DCP1Q12517 231 aaPredicted RBP-0.1□□□□□ -2.43
snR48snR48 DFM1Q12743 341 aaKnown RBP-0.1□□□□□ -2.43
snR48snR48 MRPL20P22354 195 aaPredicted RBP-0.11□□□□□ -2.43
snR48snR48 SAS3P34218 831 aa-0.11□□□□□ -2.43
snR48snR48 VPS24P36095 224 aaKnown RBP-0.11□□□□□ -2.43
snR48snR48 TPM2P40414 161 aa-0.11□□□□□ -2.43
snR48snR48 SSU72P53538 206 aaPredicted RBP-0.11□□□□□ -2.43
snR48snR48 AQR1P53943 586 aa-0.11□□□□□ -2.43
snR48snR48 RPN9Q04062 393 aaKnown RBP-0.11□□□□□ -2.43
snR48snR48 MET17P06106 444 aa-0.12□□□□□ -2.43
snR48snR48 ARF1P11076 181 aaKnown RBP-0.12□□□□□ -2.43
snR48snR48 PWP2P25635 923 aaKnown RBP-0.12□□□□□ -2.43
snR48snR48 EFM1P38732 585 aa-0.12□□□□□ -2.43
snR48snR48 YGL118CP53132 145 aa-0.12□□□□□ -2.43
snR48snR48 RTS3P53289 263 aa-0.12□□□□□ -2.43
snR48snR48 TIM10P87108 93 aa-0.12□□□□□ -2.43
snR48snR48 PRP42Q03776 544 aaKnown RBP-0.12□□□□□ -2.43
snR48snR48 INM2Q05533 292 aa-0.12□□□□□ -2.43
snR48snR48 SUE1Q06524 206 aa-0.12□□□□□ -2.43
snR48snR48 DIB1Q06819 143 aaPredicted RBP-0.12□□□□□ -2.43
Retrieved 100 of 5,963 RNA–protein pairs in 45.8 ms