RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C SRO77P38163 1010 aa6.96□□□□□ -1.29
RUP1YOR138C FET3P38993 636 aa6.96□□□□□ -1.29
RUP1YOR138C MAD2P40958 196 aa6.96□□□□□ -1.29
RUP1YOR138C PRM10P42946 383 aa6.96□□□□□ -1.29
RUP1YOR138C ERG26P53199 349 aaKnown RBP6.96□□□□□ -1.29
RUP1YOR138C MNT4P53745 580 aa6.96□□□□□ -1.29
RUP1YOR138C YLR224WQ05947 369 aa6.96□□□□□ -1.29
RUP1YOR138C IPK1Q06667 281 aa6.96□□□□□ -1.29
RUP1YOR138C ASR1Q06834 288 aa6.96□□□□□ -1.29
RUP1YOR138C FEX1Q08913 375 aa6.96□□□□□ -1.29
RUP1YOR138C YOR214CQ12282 236 aa6.96□□□□□ -1.29
RUP1YOR138C YGL194C-AQ2V2P6 80 aa6.96□□□□□ -1.29
RUP1YOR138C YSR3P23501 404 aa6.96□□□□□ -1.3
RUP1YOR138C TEF4P36008 412 aaKnown RBP6.96□□□□□ -1.3
RUP1YOR138C YKL077WP36081 392 aa6.96□□□□□ -1.3
RUP1YOR138C MRPL3P36516 390 aa6.96□□□□□ -1.3
RUP1YOR138C RRP4P38792 359 aaKnown RBP6.96□□□□□ -1.3
RUP1YOR138C RAD17P48581 401 aa6.96□□□□□ -1.3
RUP1YOR138C YLR283WQ05867 314 aa6.96□□□□□ -1.3
RUP1YOR138C BOP2Q06150 570 aa6.96□□□□□ -1.3
RUP1YOR138C CDA2Q06703 312 aa6.96□□□□□ -1.3
RUP1YOR138C RRP40Q08285 240 aaKnown RBP6.96□□□□□ -1.3
RUP1YOR138C YDL176WQ12027 708 aa6.96□□□□□ -1.3
RUP1YOR138C SPC3Q12133 184 aa6.96□□□□□ -1.3
RUP1YOR138C RKM5Q12367 367 aa6.96□□□□□ -1.3
RUP1YOR138C SLH1P53327 1967 aaKnown RBP6.95□□□□□ -1.3
RUP1YOR138C DBP2P24783 546 aaKnown RBP6.95□□□□□ -1.3
RUP1YOR138C AHC2P25649 128 aa6.95□□□□□ -1.3
RUP1YOR138C PRE4P30657 266 aa6.95□□□□□ -1.3
RUP1YOR138C FUN26P31381 517 aa6.95□□□□□ -1.3
RUP1YOR138C BNA4P38169 460 aa6.95□□□□□ -1.3
RUP1YOR138C TAE1P38340 232 aa6.95□□□□□ -1.3
RUP1YOR138C GRE3P38715 327 aaKnown RBP RIP-Chip data6.95□□□□□ -1.3not detected
RUP1YOR138C YJL068CP40363 299 aa6.95□□□□□ -1.3
RUP1YOR138C CIN1P40987 1014 aa6.95□□□□□ -1.3
RUP1YOR138C DML1Q03652 475 aa6.95□□□□□ -1.3
RUP1YOR138C ATG10Q07879 167 aa6.95□□□□□ -1.3
RUP1YOR138C AI4P03878 556 aa6.94□□□□□ -1.3
RUP1YOR138C KIN28P06242 306 aa6.94□□□□□ -1.3
RUP1YOR138C STE7P06784 515 aa6.94□□□□□ -1.3
RUP1YOR138C PRP2P20095 876 aaPredicted RBP6.94□□□□□ -1.3
RUP1YOR138C RNA14P25298 677 aaKnown RBP6.94□□□□□ -1.3
RUP1YOR138C NTH1P32356 751 aa6.94□□□□□ -1.3
RUP1YOR138C SDS22P36047 338 aa6.94□□□□□ -1.3
RUP1YOR138C PLB1P39105 664 aa6.94□□□□□ -1.3
RUP1YOR138C PZF1P39933 429 aa6.94□□□□□ -1.3
RUP1YOR138C APS3P47064 194 aa6.94□□□□□ -1.3
RUP1YOR138C BAT2P47176 376 aaKnown RBP6.94□□□□□ -1.3
RUP1YOR138C CDH1P53197 566 aa6.94□□□□□ -1.3
RUP1YOR138C MRPL35Q06678 367 aa6.94□□□□□ -1.3
RUP1YOR138C YOL036WQ08206 761 aa6.94□□□□□ -1.3
RUP1YOR138C CRT10Q08226 957 aa6.94□□□□□ -1.3
RUP1YOR138C YDL109CQ12103 647 aa6.94□□□□□ -1.3
RUP1YOR138C APC2Q12440 853 aa6.94□□□□□ -1.3
RUP1YOR138C SRF1Q12516 437 aa6.94□□□□□ -1.3
RUP1YOR138C PNO1Q99216 274 aaKnown RBP6.94□□□□□ -1.3
RUP1YOR138C STT4P37297 1900 aa6.94□□□□□ -1.3
RUP1YOR138C YOL163WP0CF20 169 aa6.94□□□□□ -1.3
RUP1YOR138C DSF1P0CX08 502 aa6.94□□□□□ -1.3
RUP1YOR138C YNR073CP0CX09 502 aa6.94□□□□□ -1.3
RUP1YOR138C REV1P12689 985 aa6.94□□□□□ -1.3
RUP1YOR138C ERD1P16151 362 aa6.94□□□□□ -1.3
RUP1YOR138C KIN3P22209 435 aa6.94□□□□□ -1.3
RUP1YOR138C PRE7P23724 241 aaKnown RBP6.94□□□□□ -1.3
RUP1YOR138C PDR3P33200 976 aa6.94□□□□□ -1.3
RUP1YOR138C DCW1P36091 449 aa6.94□□□□□ -1.3
RUP1YOR138C RRF1P38771 230 aa6.94□□□□□ -1.3
RUP1YOR138C HTD2P38790 280 aaKnown RBP6.94□□□□□ -1.3
RUP1YOR138C CHL4P38907 458 aa6.94□□□□□ -1.3
RUP1YOR138C FMP10P40098 244 aa6.94□□□□□ -1.3
RUP1YOR138C HXT9P40885 567 aa6.94□□□□□ -1.3
RUP1YOR138C MAL11P53048 616 aa6.94□□□□□ -1.3
RUP1YOR138C VOA1P53262 265 aa6.94□□□□□ -1.3
RUP1YOR138C PGA1P53896 198 aa6.94□□□□□ -1.3
RUP1YOR138C YKR011CQ02209 353 aa6.94□□□□□ -1.3
RUP1YOR138C YPL068CQ02749 293 aa6.94□□□□□ -1.3
RUP1YOR138C YPL034WQ03083 165 aa6.94□□□□□ -1.3
RUP1YOR138C FRE3Q08905 711 aa6.94□□□□□ -1.3
RUP1YOR138C ATG41Q12048 136 aa6.94□□□□□ -1.3
RUP1YOR138C RRP12Q12754 1228 aaKnown RBP6.94□□□□□ -1.3
RUP1YOR138C MOD5P07884 428 aa6.93□□□□□ -1.3
RUP1YOR138C RED1P14291 827 aa6.93□□□□□ -1.3
RUP1YOR138C APN1P22936 367 aa6.93□□□□□ -1.3
RUP1YOR138C EXG1P23776 448 aaKnown RBP6.93□□□□□ -1.3
RUP1YOR138C PUB1P32588 453 aaKnown RBP RIP-Chip data6.93□□□□□ -1.3not detected
RUP1YOR138C PTC2P39966 464 aaKnown RBP6.93□□□□□ -1.3
RUP1YOR138C FMP52P40008 231 aa6.93□□□□□ -1.3
RUP1YOR138C ECL1P48235 211 aa6.93□□□□□ -1.3
RUP1YOR138C COS10P52924 374 aa6.93□□□□□ -1.3
RUP1YOR138C PPT1P53043 513 aa6.93□□□□□ -1.3
RUP1YOR138C RHO4Q00246 291 aa6.93□□□□□ -1.3
RUP1YOR138C ROT1Q03691 256 aa6.93□□□□□ -1.3
RUP1YOR138C YMR130WQ04223 302 aa6.93□□□□□ -1.3
RUP1YOR138C YMR252CQ04814 134 aa6.93□□□□□ -1.3
RUP1YOR138C YMR315WQ04869 349 aaKnown RBP6.93□□□□□ -1.3
RUP1YOR138C SSK1Q07084 712 aa6.93□□□□□ -1.3
RUP1YOR138C FEX2Q08991 375 aa6.93□□□□□ -1.3
RUP1YOR138C YPR022CQ12139 1133 aa6.93□□□□□ -1.3
RUP1YOR138C YOR114WQ12219 294 aa6.93□□□□□ -1.3
RUP1YOR138C SUL2Q12325 893 aa6.93□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 63.5 ms