RNA–Protein interactions for RNA: YOR001W

RRP6, Transcript of Nuclear exosome exonuclease component, yeastyeast

Gene RRP6, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP6YOR001W NDC1P32500 655 aa1.98□□□□□ -2.09
RRP6YOR001W PEX2P32800 271 aa1.98□□□□□ -2.09
RRP6YOR001W IMP3P32899 183 aaPredicted RBP1.98□□□□□ -2.09
RRP6YOR001W MYO3P36006 1272 aa1.98□□□□□ -2.09
RRP6YOR001W SCO2P38072 301 aa1.98□□□□□ -2.09
RRP6YOR001W MIX23P38162 196 aa1.98□□□□□ -2.09
RRP6YOR001W YMR262WP38430 313 aa1.98□□□□□ -2.09
RRP6YOR001W PRM9P39551 298 aa1.98□□□□□ -2.09
RRP6YOR001W DSE1P40077 573 aa1.98□□□□□ -2.09
RRP6YOR001W FMC1P40491 155 aa1.98□□□□□ -2.09
RRP6YOR001W KEG1P43614 200 aa1.98□□□□□ -2.09
RRP6YOR001W MDV1P47025 714 aa1.98□□□□□ -2.09
RRP6YOR001W TIM21P53220 239 aa1.98□□□□□ -2.09
RRP6YOR001W YGR168CP53293 376 aa1.98□□□□□ -2.09
RRP6YOR001W SPR6Q01684 191 aa1.98□□□□□ -2.09
RRP6YOR001W PET117Q02771 107 aa1.98□□□□□ -2.09
RRP6YOR001W PIR3Q03180 325 aa1.98□□□□□ -2.09
RRP6YOR001W YLR283WQ05867 314 aa1.98□□□□□ -2.09
RRP6YOR001W THI7Q05998 598 aa1.98□□□□□ -2.09
RRP6YOR001W MUM3Q08750 479 aa1.98□□□□□ -2.09
RRP6YOR001W YPR1Q12458 312 aa1.98□□□□□ -2.09
RRP6YOR001W UBA3Q99344 299 aa1.98□□□□□ -2.09
RRP6YOR001W SAC3P46674 1301 aa1.98□□□□□ -2.09
RRP6YOR001W ATP6P00854 259 aa1.98□□□□□ -2.09
RRP6YOR001W HEM15P16622 393 aa1.98□□□□□ -2.09
RRP6YOR001W CHA1P25379 360 aaKnown RBP1.98□□□□□ -2.09
RRP6YOR001W ZIP1P31111 875 aa1.98□□□□□ -2.09
RRP6YOR001W DPH5P32469 300 aaPredicted RBP1.98□□□□□ -2.09
RRP6YOR001W MSN4P33749 630 aa1.98□□□□□ -2.09
RRP6YOR001W COS9P36034 407 aa1.98□□□□□ -2.09
RRP6YOR001W ARC40P38328 384 aaKnown RBP1.98□□□□□ -2.09
RRP6YOR001W YER085CP40058 173 aa1.98□□□□□ -2.09
RRP6YOR001W MSS2P40990 351 aa1.98□□□□□ -2.09
RRP6YOR001W RTT101P47050 842 aa1.98□□□□□ -2.09
RRP6YOR001W SPP2Q02521 185 aa1.98□□□□□ -2.09
RRP6YOR001W CCE1Q03702 353 aa1.98□□□□□ -2.09
RRP6YOR001W COX20Q04935 205 aa1.98□□□□□ -2.09
RRP6YOR001W ERP1Q05359 219 aaKnown RBP1.98□□□□□ -2.09
RRP6YOR001W YLR281CQ05863 155 aa1.98□□□□□ -2.09
RRP6YOR001W GMC2Q06201 188 aa1.98□□□□□ -2.09
RRP6YOR001W DSE3Q08729 430 aa1.98□□□□□ -2.09
RRP6YOR001W YNL162W-AQ3E7A8 72 aa1.98□□□□□ -2.09
RRP6YOR001W TDH3P00359 332 aaKnown RBP RIP-Chip data1.97□□□□□ -2.09not detected
RRP6YOR001W CYC3P06182 269 aa1.97□□□□□ -2.09
RRP6YOR001W HPR1P17629 752 aaKnown RBP1.97□□□□□ -2.09
RRP6YOR001W VPS3P23643 1011 aa1.97□□□□□ -2.09
RRP6YOR001W YCR043CP25361 127 aa1.97□□□□□ -2.09
RRP6YOR001W MKK1P32490 508 aa1.97□□□□□ -2.09
RRP6YOR001W TIR2P33890 251 aa1.97□□□□□ -2.09
RRP6YOR001W PMU1P36069 295 aa1.97□□□□□ -2.09
RRP6YOR001W DTR1P38125 572 aa1.97□□□□□ -2.09
RRP6YOR001W CHK1P38147 527 aa1.97□□□□□ -2.09
RRP6YOR001W MMS21P38632 267 aa1.97□□□□□ -2.09
RRP6YOR001W HIS2P38635 335 aa1.97□□□□□ -2.09
RRP6YOR001W RBG1P39729 369 aa1.97□□□□□ -2.09
RRP6YOR001W RTR1P40084 226 aaPredicted RBP1.97□□□□□ -2.09
RRP6YOR001W ALG8P40351 577 aa1.97□□□□□ -2.09
RRP6YOR001W XBP1P40489 647 aa1.97□□□□□ -2.09
RRP6YOR001W OST1P41543 476 aaKnown RBP1.97□□□□□ -2.09
RRP6YOR001W OTU1P43558 301 aa1.97□□□□□ -2.09
RRP6YOR001W TRF5P48561 642 aaKnown RBP1.97□□□□□ -2.09
RRP6YOR001W COS10P52924 374 aa1.97□□□□□ -2.09
RRP6YOR001W PXR1P53335 271 aaPredicted RBP1.97□□□□□ -2.09
RRP6YOR001W CAF40P53829 373 aa1.97□□□□□ -2.09
RRP6YOR001W HER2Q03557 464 aa1.97□□□□□ -2.09
RRP6YOR001W CTS2Q06350 511 aa1.97□□□□□ -2.09
RRP6YOR001W MDM36Q06820 579 aa1.97□□□□□ -2.09
RRP6YOR001W SLM3Q12093 417 aa1.97□□□□□ -2.09
RRP6YOR001W YOL107WQ12239 342 aa1.97□□□□□ -2.09
RRP6YOR001W YLR108CQ12259 485 aa1.97□□□□□ -2.09
RRP6YOR001W RGT2Q12300 763 aa1.97□□□□□ -2.09
RRP6YOR001W ATG31Q12421 196 aa1.97□□□□□ -2.09
RRP6YOR001W AHC1Q12433 566 aa1.97□□□□□ -2.09
RRP6YOR001W ARG80P07249 177 aa1.97□□□□□ -2.09
RRP6YOR001W RRT12P25381 491 aa1.97□□□□□ -2.09
RRP6YOR001W DOA4P32571 926 aa1.97□□□□□ -2.09
RRP6YOR001W PRS1P32895 427 aaKnown RBP1.97□□□□□ -2.09
RRP6YOR001W SKG6P32900 734 aaPredicted RBP1.97□□□□□ -2.09
RRP6YOR001W PTR2P32901 601 aa1.97□□□□□ -2.09
RRP6YOR001W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.97□□□□□ -2.09not detected
RRP6YOR001W ASK1P35734 292 aa1.97□□□□□ -2.09
RRP6YOR001W YHR045WP38775 560 aa1.97□□□□□ -2.09
RRP6YOR001W GEP4P38812 185 aa1.97□□□□□ -2.09
RRP6YOR001W MRX5P47007 382 aa1.97□□□□□ -2.09
RRP6YOR001W IBD2P53892 351 aa1.97□□□□□ -2.09
RRP6YOR001W PGA2P53903 129 aa1.97□□□□□ -2.09
RRP6YOR001W ATG38Q05789 226 aaKnown RBP1.97□□□□□ -2.09
RRP6YOR001W BER1Q06688 274 aaKnown RBP1.97□□□□□ -2.09
RRP6YOR001W SNX3Q08826 162 aaKnown RBP1.97□□□□□ -2.09
RRP6YOR001W SLF1Q12034 447 aaKnown RBP1.97□□□□□ -2.09
RRP6YOR001W APC9Q12107 265 aa1.97□□□□□ -2.09
RRP6YOR001W MEX67Q99257 599 aaKnown RBP1.97□□□□□ -2.09
RRP6YOR001W SSK22P25390 1331 aaPredicted RBP1.96□□□□□ -2.1
RRP6YOR001W ADH2P00331 348 aaKnown RBP1.96□□□□□ -2.1
RRP6YOR001W MRPL25P23369 157 aa1.96□□□□□ -2.1
RRP6YOR001W RBK1P25332 333 aa1.96□□□□□ -2.1
RRP6YOR001W SUA5P32579 426 aa1.96□□□□□ -2.1
RRP6YOR001W ATO2P32907 282 aa1.96□□□□□ -2.1
RRP6YOR001W BMH2P34730 273 aaKnown RBP1.96□□□□□ -2.1
RRP6YOR001W SMF2P38778 549 aa1.96□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 45.8 ms