RNA–Protein interactions for RNA: YKR086W

PRP16, Transcript of DEAH-box RNA helicase involved in second catalytic step of splicing and in exon ligation, yeast

Gene PRP16, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP16	YKR086W	SPO22	P40511	975 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	YIL067C	P40514	678 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	SHE10	P53075	577 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	OAZ1	Q02803	292 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	SLD5	Q03406	294 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	INP2	Q03824	705 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	CSI1	Q04368	295 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	ARV1	Q06541	321 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	HNT3	Q08702	217 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	RTN2	Q12443	393 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	TY1B-A	O13527	1196 aa	Known RBP	0.86	□□□□□ -2.27
PRP16	YKR086W	RPL24A	P04449	155 aa	Known RBP	0.86	□□□□□ -2.27
PRP16	YKR086W	STE7	P06784	515 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	KSS1	P14681	368 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	PET123	P17558	318 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	COT1	P32798	439 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	ZRT1	P32804	376 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	RAD5	P32849	1169 aa	Predicted RBP	0.86	□□□□□ -2.27
PRP16	YKR086W	CMC1	P36064	111 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	YHR210C	P38893	341 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	MBB1	P39534	108 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	VAB2	P40003	282 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	NOP16	P40007	231 aa	Known RBP	0.86	□□□□□ -2.27
PRP16	YKR086W	REE1	P40893	198 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	OST1	P41543	476 aa	Known RBP	0.86	□□□□□ -2.27
PRP16	YKR086W	YJL132W	P47014	750 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	GWT1	P47026	490 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	TAF6	P53040	516 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	ROG1	P53118	685 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	BNI5	P53890	448 aa	Known RBP	0.86	□□□□□ -2.27
PRP16	YKR086W	IBD2	P53892	351 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	YLR152C	P54072	576 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	TAF12	Q03761	539 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	INM2	Q05533	292 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	PBA1	Q05778	276 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	PLP2	Q12017	286 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	THP3	Q12049	470 aa	Known RBP	0.86	□□□□□ -2.27
PRP16	YKR086W	MDM32	Q12171	622 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	YLR108C	Q12259	485 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	MRPL23	Q12487	163 aa	Predicted RBP	0.86	□□□□□ -2.27
PRP16	YKR086W	YDL012C	Q12489	107 aa		0.86	□□□□□ -2.27
PRP16	YKR086W	ATR1	P13090	542 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	NAM9	P27929	486 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	SWD3	P38123	315 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	YBR241C	P38142	488 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	LYS1	P38998	373 aa	RIP-Chip data	0.85	□□□□□ -2.27	not detected
PRP16	YKR086W	YIL012W	P40551	113 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	VMA13	P41807	478 aa	Known RBP	0.85	□□□□□ -2.27
PRP16	YKR086W	COG7	P53195	279 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	NUP116	Q02630	1113 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	ADD37	Q03233	198 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	PRM15	Q03262	622 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	ADH6	Q04894	360 aa	Known RBP	0.85	□□□□□ -2.27
PRP16	YKR086W	VTA1	Q06263	330 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	ETT1	Q08421	412 aa	Known RBP	0.85	□□□□□ -2.27
PRP16	YKR086W	APC5	Q08683	685 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	YDL009C	Q12210	107 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	GPM3	Q12326	303 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	YEL009C-A	A0A023PZF2	135 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	ARG4	P04076	463 aa	Predicted RBP	0.85	□□□□□ -2.27
PRP16	YKR086W	MER1	P16523	270 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	SPS22	P25380	463 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	ERV1	P27882	189 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	PTK1	P36002	662 aa	Predicted RBP	0.85	□□□□□ -2.27
PRP16	YKR086W	THI2	P38141	450 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	RRT2	P38332	387 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	COX15	P40086	486 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	UTP18	P40362	594 aa	Predicted RBP	0.85	□□□□□ -2.27
PRP16	YKR086W	AIM22	P47051	409 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	HOP2	P53187	214 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	TIM21	P53220	239 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	YGR266W	P53326	701 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	BNA7	Q04066	261 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	VTI1	Q04338	217 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	ERB1	Q04660	807 aa	Known RBP	0.85	□□□□□ -2.27
PRP16	YKR086W	FSH2	Q05015	223 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	CTR3	Q06686	241 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	HEM25	Q07534	307 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	RRS1	Q08746	203 aa	Known RBP	0.85	□□□□□ -2.27
PRP16	YKR086W	FDH1	Q08911	376 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	MYO1	P08964	1928 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	TEF1	P02994	458 aa	Known RBP	0.85	□□□□□ -2.27
PRP16	YKR086W	MSF1	P08425	469 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	CLN3	P13365	580 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	YCR007C	P25354	239 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	DPH2	P32461	534 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	GLC7	P32598	312 aa	Known RBP	0.85	□□□□□ -2.27
PRP16	YKR086W	SKG1	P36169	355 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	SOL2	P37262	315 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	TCM62	P38228	572 aa	Known RBP	0.85	□□□□□ -2.27
PRP16	YKR086W	GEP4	P38812	185 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	RBG1	P39729	369 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	PTI1	P39927	425 aa	Predicted RBP	0.85	□□□□□ -2.27
PRP16	YKR086W	RTT105	P40063	208 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	EFM4	P40516	257 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	CAK1	P43568	368 aa	Predicted RBP	0.85	□□□□□ -2.27
PRP16	YKR086W	SSN8	P47821	323 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	PNG1	Q02890	363 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	YDR115W	Q04598	105 aa		0.85	□□□□□ -2.27
PRP16	YKR086W	RBS1	Q05672	457 aa	Known RBP	0.85	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms