RNA–Protein interactions for RNA: YGL213C

SKI8, Transcript of Ski complex component and WD-repeat protein, yeast

Gene SKI8, Length 1,194 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI8	YGL213C	SPO19	Q03029	223 aa		4.43	□□□□□ -1.7
SKI8	YGL213C	RVB1	Q03940	463 aa	Known RBP	4.43	□□□□□ -1.7
SKI8	YGL213C	ECM18	Q04623	453 aa		4.43	□□□□□ -1.7
SKI8	YGL213C	YPR1	Q12458	312 aa		4.43	□□□□□ -1.7
SKI8	YGL213C	RAD1	P06777	1100 aa		4.42	□□□□□ -1.7
SKI8	YGL213C	RAD23	P32628	398 aa	Known RBP	4.42	□□□□□ -1.7
SKI8	YGL213C	PEX18	P38855	283 aa		4.42	□□□□□ -1.7
SKI8	YGL213C	SCS3	P53012	380 aa		4.42	□□□□□ -1.7
SKI8	YGL213C	YGL260W	P53056	76 aa		4.42	□□□□□ -1.7
SKI8	YGL213C	RPN14	P53196	417 aa		4.42	□□□□□ -1.7
SKI8	YGL213C	TDA1	Q03533	586 aa		4.42	□□□□□ -1.7
SKI8	YGL213C	PBA1	Q05778	276 aa		4.42	□□□□□ -1.7
SKI8	YGL213C	NDD1	Q08887	554 aa		4.42	□□□□□ -1.7
SKI8	YGL213C	YGK3	Q12222	375 aa	Predicted RBP	4.42	□□□□□ -1.7
SKI8	YGL213C	YER078W-A	Q3E7A2	54 aa		4.42	□□□□□ -1.7
SKI8	YGL213C	YBR298C-A	Q8TGK4	73 aa		4.42	□□□□□ -1.7
SKI8	YGL213C	HHF1	P02309	103 aa	Known RBP	4.41	□□□□□ -1.7
SKI8	YGL213C	POP5	P28005	173 aa		4.41	□□□□□ -1.7
SKI8	YGL213C	MKK1	P32490	508 aa		4.41	□□□□□ -1.7
SKI8	YGL213C	FMP46	P36141	133 aa	Known RBP	4.41	□□□□□ -1.7
SKI8	YGL213C	YMR262W	P38430	313 aa		4.41	□□□□□ -1.7
SKI8	YGL213C	YPT35	P38815	214 aa	Known RBP	4.41	□□□□□ -1.7
SKI8	YGL213C	PTH1	P38876	190 aa	Known RBP	4.41	□□□□□ -1.7
SKI8	YGL213C	FET3	P38993	636 aa		4.41	□□□□□ -1.7
SKI8	YGL213C	GCD14	P46959	383 aa	Predicted RBP	4.41	□□□□□ -1.7
SKI8	YGL213C	APC4	Q04601	652 aa		4.41	□□□□□ -1.7
SKI8	YGL213C	ERV41	Q04651	352 aa		4.41	□□□□□ -1.7
SKI8	YGL213C	YPR091C	Q06833	770 aa		4.41	□□□□□ -1.7
SKI8	YGL213C	DNL4	Q08387	944 aa	Predicted RBP	4.41	□□□□□ -1.7
SKI8	YGL213C	SUP35	P05453	685 aa	Known RBP	4.4	□□□□□ -1.71
SKI8	YGL213C	MSS116	P15424	664 aa	Known RBP	4.4	□□□□□ -1.71
SKI8	YGL213C	YUR1	P26725	428 aa		4.4	□□□□□ -1.71
SKI8	YGL213C	RPL16A	P26784	199 aa	Known RBP	4.4	□□□□□ -1.71
SKI8	YGL213C	KAR9	P32526	644 aa		4.4	□□□□□ -1.71
SKI8	YGL213C	RPC25	P35718	212 aa		4.4	□□□□□ -1.71
SKI8	YGL213C	GTO1	P48239	356 aa		4.4	□□□□□ -1.71
SKI8	YGL213C	TAF6	P53040	516 aa		4.4	□□□□□ -1.71
SKI8	YGL213C	CSM3	Q04659	317 aa		4.4	□□□□□ -1.71
SKI8	YGL213C	RTN1	Q04947	295 aa	Known RBP	4.4	□□□□□ -1.71
SKI8	YGL213C	SLF1	Q12034	447 aa	Known RBP	4.4	□□□□□ -1.71
SKI8	YGL213C	FCY22	Q12119	530 aa		4.4	□□□□□ -1.71
SKI8	YGL213C	RBK1	P25332	333 aa		4.39	□□□□□ -1.71
SKI8	YGL213C	YBL059W	P34224	193 aa		4.39	□□□□□ -1.71
SKI8	YGL213C	YKL070W	P36087	169 aa		4.39	□□□□□ -1.71
SKI8	YGL213C	FHL1	P39521	936 aa		4.39	□□□□□ -1.71
SKI8	YGL213C	EMC2	P47133	292 aa	Known RBP	4.39	□□□□□ -1.71
SKI8	YGL213C	YGL185C	P53100	379 aa		4.39	□□□□□ -1.71
SKI8	YGL213C	MND1	P53102	219 aa		4.39	□□□□□ -1.71
SKI8	YGL213C	PXR1	P53335	271 aa	Predicted RBP	4.39	□□□□□ -1.71
SKI8	YGL213C	SAM4	Q08985	325 aa	Known RBP	4.39	□□□□□ -1.71
SKI8	YGL213C	TMS1	Q12116	473 aa		4.39	□□□□□ -1.71
SKI8	YGL213C	UBA3	Q99344	299 aa		4.39	□□□□□ -1.71
SKI8	YGL213C	DAL2	P25335	343 aa		4.38	□□□□□ -1.71
SKI8	YGL213C	ERG9	P29704	444 aa		4.38	□□□□□ -1.71
SKI8	YGL213C	DEG1	P31115	442 aa	Known RBP	4.38	□□□□□ -1.71
SKI8	YGL213C	HXT1	P32465	570 aa		4.38	□□□□□ -1.71
SKI8	YGL213C	SPO23	P33757	523 aa		4.38	□□□□□ -1.71
SKI8	YGL213C	MRPL37	P36532	105 aa		4.38	□□□□□ -1.71
SKI8	YGL213C	CDC40	P40968	455 aa	Predicted RBP	4.38	□□□□□ -1.71
SKI8	YGL213C	CTK3	P46963	296 aa	Predicted RBP	4.38	□□□□□ -1.71
SKI8	YGL213C	YJR085C	P47131	105 aa	Known RBP	4.38	□□□□□ -1.71
SKI8	YGL213C	CWC22	P53333	577 aa	Known RBP	4.38	□□□□□ -1.71
SKI8	YGL213C	RIF2	Q06208	395 aa		4.38	□□□□□ -1.71
SKI8	YGL213C	RPS8A	P0CX39	200 aa	Known RBP	4.37	□□□□□ -1.71
SKI8	YGL213C	RPS8B	P0CX40	200 aa	Known RBP	4.37	□□□□□ -1.71
SKI8	YGL213C	MSI1	P13712	422 aa		4.37	□□□□□ -1.71
SKI8	YGL213C	MEK1	P24719	497 aa	Predicted RBP	4.37	□□□□□ -1.71
SKI8	YGL213C	DCC1	P25559	380 aa		4.37	□□□□□ -1.71
SKI8	YGL213C	ITR2	P30606	609 aa		4.37	□□□□□ -1.71
SKI8	YGL213C	ACB1	P31787	87 aa		4.37	□□□□□ -1.71
SKI8	YGL213C	YKL162C	P36052	402 aa		4.37	□□□□□ -1.71
SKI8	YGL213C	AVT5	P38176	459 aa		4.37	□□□□□ -1.71
SKI8	YGL213C	KRE9	P39005	276 aa		4.37	□□□□□ -1.71
SKI8	YGL213C	DFG10	P40526	253 aa		4.37	□□□□□ -1.71
SKI8	YGL213C	REX2	P54964	269 aa	Known RBP	4.37	□□□□□ -1.71
SKI8	YGL213C	ELP3	Q02908	557 aa	Known RBP	4.37	□□□□□ -1.71
SKI8	YGL213C	YDL114W	Q07530	308 aa		4.37	□□□□□ -1.71
SKI8	YGL213C	ERV2	Q12284	196 aa		4.37	□□□□□ -1.71
SKI8	YGL213C	HMS1	Q12398	434 aa		4.37	□□□□□ -1.71
SKI8	YGL213C	RAD7	P06779	565 aa		4.36	□□□□□ -1.71
SKI8	YGL213C	SSA3	P09435	649 aa	Known RBP	4.36	□□□□□ -1.71
SKI8	YGL213C	SPT15	P13393	240 aa	Known RBP	4.36	□□□□□ -1.71
SKI8	YGL213C	RPL5	P26321	297 aa	Known RBP	4.36	□□□□□ -1.71
SKI8	YGL213C	ICL1	P28240	557 aa	Predicted RBP	4.36	□□□□□ -1.71
SKI8	YGL213C	YUH1	P35127	236 aa		4.36	□□□□□ -1.71
SKI8	YGL213C	YKR015C	P36111	568 aa		4.36	□□□□□ -1.71
SKI8	YGL213C	MMS21	P38632	267 aa		4.36	□□□□□ -1.71
SKI8	YGL213C	DSE1	P40077	573 aa		4.36	□□□□□ -1.71
SKI8	YGL213C	INA22	P40576	216 aa		4.36	□□□□□ -1.71
SKI8	YGL213C	YNL320W	P42840	284 aa		4.36	□□□□□ -1.71
SKI8	YGL213C	YCH1	P42937	148 aa		4.36	□□□□□ -1.71
SKI8	YGL213C	YFR057W	P43625	151 aa		4.36	□□□□□ -1.71
SKI8	YGL213C	MST27	P53176	234 aa		4.36	□□□□□ -1.71
SKI8	YGL213C	YNL260C	P53846	198 aa		4.36	□□□□□ -1.71
SKI8	YGL213C	YNL050C	P53952	270 aa		4.36	□□□□□ -1.71
SKI8	YGL213C	HRI1	Q05905	244 aa	Known RBP	4.36	□□□□□ -1.71
SKI8	YGL213C	KAP95	Q06142	861 aa	Known RBP	4.36	□□□□□ -1.71
SKI8	YGL213C	YDL109C	Q12103	647 aa		4.36	□□□□□ -1.71
SKI8	YGL213C	CSM1	P25651	190 aa		4.35	□□□□□ -1.71
SKI8	YGL213C	FUN26	P31381	517 aa		4.35	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 65.7 ms