RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeast

Gene VMA3, Length 483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA3	YEL027W	SEA4	P38164	1038 aa		5.94	□□□□□ -1.46
VMA3	YEL027W	EXO84	P38261	753 aa		5.94	□□□□□ -1.46
VMA3	YEL027W	YBR285W	P38354	144 aa		5.94	□□□□□ -1.46
VMA3	YEL027W	YHR097C	P38809	366 aa	Known RBP	5.94	□□□□□ -1.46
VMA3	YEL027W	YIL067C	P40514	678 aa		5.94	□□□□□ -1.46
VMA3	YEL027W	PHB1	P40961	287 aa		5.94	□□□□□ -1.46
VMA3	YEL027W	VNX1	P42839	908 aa		5.94	□□□□□ -1.46
VMA3	YEL027W	IMD4	P50094	524 aa	Known RBP	5.94	□□□□□ -1.46
VMA3	YEL027W	MAL11	P53048	616 aa		5.94	□□□□□ -1.46
VMA3	YEL027W	YLR460C	P54007	376 aa		5.94	□□□□□ -1.46
VMA3	YEL027W	YPL068C	Q02749	293 aa		5.94	□□□□□ -1.46
VMA3	YEL027W	YDR541C	Q03049	344 aa		5.94	□□□□□ -1.46
VMA3	YEL027W	YMR099C	Q03161	297 aa	Known RBP	5.94	□□□□□ -1.46
VMA3	YEL027W	INP1	Q03694	420 aa		5.94	□□□□□ -1.46
VMA3	YEL027W	YDL211C	Q12121	372 aa		5.94	□□□□□ -1.46
VMA3	YEL027W	HAA1	Q12753	694 aa	Known RBP	5.94	□□□□□ -1.46
VMA3	YEL027W	MHF1	Q3E835	90 aa		5.94	□□□□□ -1.46
VMA3	YEL027W	SAC7	P17121	654 aa		5.93	□□□□□ -1.46
VMA3	YEL027W	RHB1	P25378	209 aa		5.93	□□□□□ -1.46
VMA3	YEL027W	HIR2	P32480	875 aa		5.93	□□□□□ -1.46
VMA3	YEL027W	MCM7	P38132	845 aa		5.93	□□□□□ -1.46
VMA3	YEL027W	ECM8	P38246	354 aa		5.93	□□□□□ -1.46
VMA3	YEL027W	AMN1	P38285	549 aa	Predicted RBP	5.93	□□□□□ -1.46
VMA3	YEL027W	ECM34	P38728	170 aa		5.93	□□□□□ -1.46
VMA3	YEL027W	CTF8	P38877	133 aa		5.93	□□□□□ -1.46
VMA3	YEL027W	TAT2	P38967	592 aa		5.93	□□□□□ -1.46
VMA3	YEL027W	PAC1	P39946	494 aa	Known RBP	5.93	□□□□□ -1.46
VMA3	YEL027W	PRE6	P40303	254 aa	Known RBP	5.93	□□□□□ -1.46
VMA3	YEL027W	YJR115W	P47152	169 aa		5.93	□□□□□ -1.46
VMA3	YEL027W	RBL2	P48606	106 aa	Known RBP	5.93	□□□□□ -1.46
VMA3	YEL027W	TOS2	P50078	622 aa		5.93	□□□□□ -1.46
VMA3	YEL027W	SEH1	P53011	349 aa	Known RBP	5.93	□□□□□ -1.46
VMA3	YEL027W	SYF2	P53277	215 aa	Predicted RBP	5.93	□□□□□ -1.46
VMA3	YEL027W	HOL1	P53389	586 aa		5.93	□□□□□ -1.46
VMA3	YEL027W	MEP3	P53390	489 aa		5.93	□□□□□ -1.46
VMA3	YEL027W	COG5	P53951	403 aa		5.93	□□□□□ -1.46
VMA3	YEL027W	YSA1	Q01976	231 aa		5.93	□□□□□ -1.46
VMA3	YEL027W	NCE101	Q02820	53 aa		5.93	□□□□□ -1.46
VMA3	YEL027W	YDR209C	Q03480	137 aa		5.93	□□□□□ -1.46
VMA3	YEL027W	YPR109W	Q06104	294 aa		5.93	□□□□□ -1.46
VMA3	YEL027W	YPS7	Q06325	596 aa		5.93	□□□□□ -1.46
VMA3	YEL027W	ATG17	Q06410	417 aa		5.93	□□□□□ -1.46
VMA3	YEL027W	CYK3	Q07533	885 aa		5.93	□□□□□ -1.46
VMA3	YEL027W	KGD1	P20967	1014 aa	Known RBP	5.92	□□□□□ -1.46
VMA3	YEL027W	ITR2	P30606	609 aa		5.92	□□□□□ -1.46
VMA3	YEL027W	PRP21	P32524	280 aa	Predicted RBP	5.92	□□□□□ -1.46
VMA3	YEL027W	HBS1	P32769	611 aa	Known RBP	5.92	□□□□□ -1.46
VMA3	YEL027W	SEC61	P32915	480 aa		5.92	□□□□□ -1.46
VMA3	YEL027W	RIB7	P33312	244 aa		5.92	□□□□□ -1.46
VMA3	YEL027W	TIF3	P34167	436 aa	Known RBP	5.92	□□□□□ -1.46
VMA3	YEL027W	SNU114	P36048	1008 aa	Known RBP	5.92	□□□□□ -1.46
VMA3	YEL027W	OM14	P38325	134 aa		5.92	□□□□□ -1.46
VMA3	YEL027W	CHS7	P38843	316 aa		5.92	□□□□□ -1.46
VMA3	YEL027W	YEL068C	P39977	110 aa		5.92	□□□□□ -1.46
VMA3	YEL027W	SHR5	P41912	237 aa		5.92	□□□□□ -1.46
VMA3	YEL027W	SNO3	P43544	222 aa		5.92	□□□□□ -1.46
VMA3	YEL027W	EMC2	P47133	292 aa	Known RBP	5.92	□□□□□ -1.46
VMA3	YEL027W	ARV1	Q06541	321 aa		5.92	□□□□□ -1.46
VMA3	YEL027W	YDL218W	Q07629	317 aa		5.92	□□□□□ -1.46
VMA3	YEL027W	FMP45	Q07651	309 aa		5.92	□□□□□ -1.46
VMA3	YEL027W	BRX1	Q08235	291 aa	Known RBP	5.92	□□□□□ -1.46
VMA3	YEL027W	YOS9	Q99220	542 aa		5.92	□□□□□ -1.46
VMA3	YEL027W	TPK3	P05986	398 aa		5.91	□□□□□ -1.46
VMA3	YEL027W	SIR3	P06701	978 aa		5.91	□□□□□ -1.46
VMA3	YEL027W	RPC40	P07703	335 aa	Known RBP	5.91	□□□□□ -1.46
VMA3	YEL027W	DAT1	P13483	248 aa	Known RBP	5.91	□□□□□ -1.46
VMA3	YEL027W	TFS1	P14306	219 aa		5.91	□□□□□ -1.46
VMA3	YEL027W	BUD5	P25300	642 aa	Predicted RBP	5.91	□□□□□ -1.46
VMA3	YEL027W	CWH43	P25618	953 aa		5.91	□□□□□ -1.46
VMA3	YEL027W	NUD1	P32336	851 aa		5.91	□□□□□ -1.46
VMA3	YEL027W	NPL6	P32832	435 aa		5.91	□□□□□ -1.46
VMA3	YEL027W	ECM15	P35195	104 aa		5.91	□□□□□ -1.46
VMA3	YEL027W	YBR138C	P38277	524 aa		5.91	□□□□□ -1.46
VMA3	YEL027W	PEX18	P38855	283 aa		5.91	□□□□□ -1.46
VMA3	YEL027W	ISC1	P40015	477 aa	Known RBP	5.91	□□□□□ -1.46
VMA3	YEL027W	MSS2	P40990	351 aa		5.91	□□□□□ -1.46
VMA3	YEL027W	LEM3	P42838	414 aa		5.91	□□□□□ -1.46
VMA3	YEL027W	STB1	P42845	420 aa		5.91	□□□□□ -1.46
VMA3	YEL027W	BAT2	P47176	376 aa	Known RBP	5.91	□□□□□ -1.46
VMA3	YEL027W	RPA14	P50106	137 aa		5.91	□□□□□ -1.46
VMA3	YEL027W	MON1	P53129	644 aa		5.91	□□□□□ -1.46
VMA3	YEL027W	MPA43	P53583	542 aa	Predicted RBP	5.91	□□□□□ -1.46
VMA3	YEL027W	YKR005C	Q02203	525 aa		5.91	□□□□□ -1.46
VMA3	YEL027W	YKR011C	Q02209	353 aa		5.91	□□□□□ -1.46
VMA3	YEL027W	FDC1	Q03034	503 aa		5.91	□□□□□ -1.46
VMA3	YEL027W	YDR179W-A	Q03983	463 aa		5.91	□□□□□ -1.46
VMA3	YEL027W	SMP3	Q04174	516 aa		5.91	□□□□□ -1.46
VMA3	YEL027W	NOP12	Q08208	459 aa	Known RBP	5.91	□□□□□ -1.46
VMA3	YEL027W	CRT10	Q08226	957 aa		5.91	□□□□□ -1.46
VMA3	YEL027W	MSH5	Q12175	901 aa		5.91	□□□□□ -1.46
VMA3	YEL027W	DBP10	Q12389	995 aa	Known RBP	5.91	□□□□□ -1.46
VMA3	YEL027W	PRP46	Q12417	451 aa	Predicted RBP	5.91	□□□□□ -1.46
VMA3	YEL027W	APC2	Q12440	853 aa		5.91	□□□□□ -1.46
VMA3	YEL027W	YPR015C	Q12531	247 aa		5.91	□□□□□ -1.46
VMA3	YEL027W	YPL119C-A	Q3E751	87 aa		5.91	□□□□□ -1.46
VMA3	YEL027W	FLP1	P03870	423 aa		5.9	□□□□□ -1.46
VMA3	YEL027W	ARF1	P11076	181 aa	Known RBP	5.9	□□□□□ -1.46
VMA3	YEL027W	PRP19	P32523	503 aa	Known RBP	5.9	□□□□□ -1.46
VMA3	YEL027W	YPT7	P32939	208 aa		5.9	□□□□□ -1.46
VMA3	YEL027W	AHP1	P38013	176 aa	Known RBP	5.9	□□□□□ -1.46

Retrieved 100 of 5,963 RNA–protein pairs in 88.8 ms