RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W HES1P35843 434 aa1.96□□□□□ -2.1
UBP1YDL122W APL3P38065 1025 aa1.96□□□□□ -2.1
UBP1YDL122W DIA4P38705 446 aaPredicted RBP1.96□□□□□ -2.1
UBP1YDL122W WSS1P38838 269 aa1.96□□□□□ -2.1
UBP1YDL122W SEC31P38968 1273 aaKnown RBP1.96□□□□□ -2.1
UBP1YDL122W FMP52P40008 231 aa1.96□□□□□ -2.1
UBP1YDL122W RTT105P40063 208 aa1.96□□□□□ -2.1
UBP1YDL122W YJL163CP46996 555 aa1.96□□□□□ -2.1
UBP1YDL122W MSY1P48527 492 aa1.96□□□□□ -2.1
UBP1YDL122W YGR151CP53287 111 aa1.96□□□□□ -2.1
UBP1YDL122W SNF12P53628 566 aa1.96□□□□□ -2.1
UBP1YDL122W YNL058CP53947 316 aa1.96□□□□□ -2.1
UBP1YDL122W RPL6AQ02326 176 aaKnown RBP1.96□□□□□ -2.1
UBP1YDL122W YDL242WQ07746 117 aa1.96□□□□□ -2.1
UBP1YDL122W AAD15Q08361 143 aa1.96□□□□□ -2.1
UBP1YDL122W USV1Q12132 391 aa1.96□□□□□ -2.1
UBP1YDL122W SLH1P53327 1967 aaKnown RBP1.96□□□□□ -2.1
UBP1YDL122W FAS1P07149 2051 aaKnown RBP1.96□□□□□ -2.1
UBP1YDL122W ILV5P06168 395 aaKnown RBP1.96□□□□□ -2.1
UBP1YDL122W LEU4P06208 619 aaKnown RBP1.96□□□□□ -2.1
UBP1YDL122W DAL2P25335 343 aa1.96□□□□□ -2.1
UBP1YDL122W HXT3P32466 567 aaKnown RBP1.96□□□□□ -2.1
UBP1YDL122W YEL043WP32618 956 aa1.96□□□□□ -2.1
UBP1YDL122W TIF3P34167 436 aaKnown RBP1.96□□□□□ -2.1
UBP1YDL122W YBR144CP34215 104 aa1.96□□□□□ -2.1
UBP1YDL122W GDT1P38301 280 aaPredicted RBP1.96□□□□□ -2.1
UBP1YDL122W ARN2P38724 620 aa1.96□□□□□ -2.1
UBP1YDL122W MRX1P40050 688 aa1.96□□□□□ -2.1
UBP1YDL122W YIR020CP40575 100 aa1.96□□□□□ -2.1
UBP1YDL122W FAR3P46671 204 aa1.96□□□□□ -2.1
UBP1YDL122W IST1P53843 298 aaPredicted RBP1.96□□□□□ -2.1
UBP1YDL122W SKI8Q02793 397 aaPredicted RBP1.96□□□□□ -2.1
UBP1YDL122W TAF12Q03761 539 aa1.96□□□□□ -2.1
UBP1YDL122W YMR111CQ04461 462 aaPredicted RBP1.96□□□□□ -2.1
UBP1YDL122W RBS1Q05672 457 aaKnown RBP1.96□□□□□ -2.1
UBP1YDL122W CRT10Q08226 957 aa1.96□□□□□ -2.1
UBP1YDL122W RKI1Q12189 258 aa1.96□□□□□ -2.1
UBP1YDL122W WTM1Q12363 437 aaKnown RBP1.96□□□□□ -2.1
UBP1YDL122W MRP13P12686 339 aa1.95□□□□□ -2.1
UBP1YDL122W AMD2P22580 549 aa1.95□□□□□ -2.1
UBP1YDL122W LAC1P28496 418 aa1.95□□□□□ -2.1
UBP1YDL122W GSH1P32477 678 aa1.95□□□□□ -2.1
UBP1YDL122W SSE1P32589 693 aaKnown RBP1.95□□□□□ -2.1
UBP1YDL122W MGM101P32787 269 aaKnown RBP1.95□□□□□ -2.1
UBP1YDL122W OAR1P35731 278 aa1.95□□□□□ -2.1
UBP1YDL122W ADH5P38113 351 aaKnown RBP1.95□□□□□ -2.1
UBP1YDL122W THI2P38141 450 aa1.95□□□□□ -2.1
UBP1YDL122W SLM4P38247 162 aa1.95□□□□□ -2.1
UBP1YDL122W YSW1P38280 609 aa1.95□□□□□ -2.1
UBP1YDL122W UIP3P39547 235 aa1.95□□□□□ -2.1
UBP1YDL122W LAS21P40367 830 aa1.95□□□□□ -2.1
UBP1YDL122W NAS2P40555 220 aa1.95□□□□□ -2.1
UBP1YDL122W STB2P46679 850 aa1.95□□□□□ -2.1
UBP1YDL122W DPB11P47027 764 aaPredicted RBP1.95□□□□□ -2.1
UBP1YDL122W YGR127WP53275 312 aa1.95□□□□□ -2.1
UBP1YDL122W FRE4P53746 719 aa1.95□□□□□ -2.1
UBP1YDL122W YNR068CP53754 272 aa1.95□□□□□ -2.1
UBP1YDL122W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1not detected
UBP1YDL122W PLM2Q04383 521 aa1.95□□□□□ -2.1
UBP1YDL122W MGR3Q04472 501 aa1.95□□□□□ -2.1
UBP1YDL122W IVY1Q04934 453 aa1.95□□□□□ -2.1
UBP1YDL122W DBP9Q06218 594 aaKnown RBP1.95□□□□□ -2.1
UBP1YDL122W ESA1Q08649 445 aa1.95□□□□□ -2.1
UBP1YDL122W INP53Q12271 1107 aa1.95□□□□□ -2.1
UBP1YDL122W TAF3Q12297 353 aa1.95□□□□□ -2.1
UBP1YDL122W AAC1P04710 309 aa1.95□□□□□ -2.1
UBP1YDL122W YAK1P14680 807 aa1.95□□□□□ -2.1
UBP1YDL122W ART10P18634 518 aaKnown RBP1.95□□□□□ -2.1
UBP1YDL122W CLN1P20437 546 aa1.95□□□□□ -2.1
UBP1YDL122W ADE1P27616 306 aa1.95□□□□□ -2.1
UBP1YDL122W IMP3P32899 183 aaPredicted RBP1.95□□□□□ -2.1
UBP1YDL122W RIB7P33312 244 aa1.95□□□□□ -2.1
UBP1YDL122W MAK5P38112 773 aaPredicted RBP1.95□□□□□ -2.1
UBP1YDL122W LDB7P38210 180 aa1.95□□□□□ -2.1
UBP1YDL122W NTC20P38302 140 aaPredicted RBP1.95□□□□□ -2.1
UBP1YDL122W SWC5P38326 303 aa1.95□□□□□ -2.1
UBP1YDL122W YHR218WP38899 603 aa1.95□□□□□ -2.1
UBP1YDL122W ECM10P39987 644 aa1.95□□□□□ -2.1
UBP1YDL122W YFL064CP43540 174 aa1.95□□□□□ -2.1
UBP1YDL122W PTR3P43606 678 aa1.95□□□□□ -2.1
UBP1YDL122W YGR149WP48236 432 aa1.95□□□□□ -2.1
UBP1YDL122W AAT1Q01802 451 aa1.95□□□□□ -2.1
UBP1YDL122W YMR310CQ04867 317 aaPredicted RBP1.95□□□□□ -2.1
UBP1YDL122W YLR446WQ06204 433 aa1.95□□□□□ -2.1
UBP1YDL122W YPR147CQ06522 304 aaKnown RBP1.95□□□□□ -2.1
UBP1YDL122W UAF30Q08747 228 aa1.95□□□□□ -2.1
UBP1YDL122W FRE3Q08905 711 aa1.95□□□□□ -2.1
UBP1YDL122W YPR202WQ08993 238 aa1.95□□□□□ -2.1
UBP1YDL122W FCY22Q12119 530 aa1.95□□□□□ -2.1
UBP1YDL122W ATG9Q12142 997 aa1.95□□□□□ -2.1
UBP1YDL122W MDY2Q12285 212 aa1.95□□□□□ -2.1
UBP1YDL122W KGD1P20967 1014 aaKnown RBP1.94□□□□□ -2.1
UBP1YDL122W MGR1P25573 417 aa1.94□□□□□ -2.1
UBP1YDL122W DAL80P26343 269 aa1.94□□□□□ -2.1
UBP1YDL122W IDH2P28241 369 aaKnown RBP1.94□□□□□ -2.1
UBP1YDL122W HRR25P29295 494 aaKnown RBP1.94□□□□□ -2.1
UBP1YDL122W GCG1P32656 232 aaKnown RBP1.94□□□□□ -2.1
UBP1YDL122W SUR1P33300 382 aa1.94□□□□□ -2.1
UBP1YDL122W YPT10P38146 199 aa1.94□□□□□ -2.1
UBP1YDL122W ALG8P40351 577 aa1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms