RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 TMOD1P28289 359 aa22.66■■□□□ 1.22
CLN6-222ENST00000637667 GATMP50440 423 aa22.66■■□□□ 1.22
CLN6-222ENST00000637667 UGCGQ16739 394 aa22.66■■□□□ 1.22
CLN6-222ENST00000637667 EFCAB12Q6NXP0 572 aa22.66■■□□□ 1.22
CLN6-222ENST00000637667 FAM228AQ86W67 206 aa22.66■■□□□ 1.22
CLN6-222ENST00000637667 LINC01465Q8N7H1 131 aa22.66■■□□□ 1.22
CLN6-222ENST00000637667 RDM1Q8NG50 284 aa22.66■■□□□ 1.22
CLN6-222ENST00000637667 P2RX5Q93086 422 aa22.66■■□□□ 1.22
CLN6-222ENST00000637667 RGS18Q9NS28 235 aa22.66■■□□□ 1.22
CLN6-222ENST00000637667 PLAGL2Q9UPG8 496 aa22.66■■□□□ 1.22
CLN6-222ENST00000637667 AKT3Q9Y243 479 aa22.66■■□□□ 1.22
CLN6-222ENST00000637667 PCDHB7Q9Y5E2 793 aa22.66■■□□□ 1.22
CLN6-222ENST00000637667 LOXHD1Q8IVV2 1947 aa22.65■■□□□ 1.22
CLN6-222ENST00000637667 C9IYK1 514 aa22.65■■□□□ 1.22
CLN6-222ENST00000637667 H3BQ06 376 aaPredicted RBP22.65■■□□□ 1.22
CLN6-222ENST00000637667 NCK2O43639 380 aa22.65■■□□□ 1.22
CLN6-222ENST00000637667 MMP1P03956 469 aa22.65■■□□□ 1.22
CLN6-222ENST00000637667 COL9A1P20849 921 aa22.65■■□□□ 1.22
CLN6-222ENST00000637667 SCRN1Q12765 414 aa22.65■■□□□ 1.22
CLN6-222ENST00000637667 NONOQ15233 471 aaKnown RBP eCLIP22.65■■□□□ 1.226e-7■■■□□ 17.3
CLN6-222ENST00000637667 NAALADL2Q58DX5 795 aa22.65■■□□□ 1.22
CLN6-222ENST00000637667 PTCRAQ6ISU1 281 aaPredicted RBP22.65■■□□□ 1.22
CLN6-222ENST00000637667 MOXD1Q6UVY6 613 aa22.65■■□□□ 1.22
CLN6-222ENST00000637667 EP400NLQ6ZTU2 488 aa22.65■■□□□ 1.22
CLN6-222ENST00000637667 SLC24A5Q71RS6 500 aa22.65■■□□□ 1.22
CLN6-222ENST00000637667 LRRC71Q8N4P6 559 aa22.65■■□□□ 1.22
CLN6-222ENST00000637667 MBOAT7Q96N66 472 aa22.65■■□□□ 1.22
CLN6-222ENST00000637667 ALG13Q9NP73 1137 aaKnown RBP22.65■■□□□ 1.22
CLN6-222ENST00000637667 RNF216Q9NWF9 866 aaPredicted RBP22.65■■□□□ 1.22
CLN6-222ENST00000637667 PPP4R2Q9NY27 417 aa22.65■■□□□ 1.22
CLN6-222ENST00000637667 NLRP11P59045 1033 aaKnown RBP22.64■■□□□ 1.21
CLN6-222ENST00000637667 PUS10Q3MIT2 529 aaKnown RBP22.64■■□□□ 1.21
CLN6-222ENST00000637667 MIER3Q7Z3K6 550 aa22.64■■□□□ 1.21
CLN6-222ENST00000637667 KRT25Q7Z3Z0 450 aa22.64■■□□□ 1.21
CLN6-222ENST00000637667 ZNF710Q8N1W2 664 aa22.64■■□□□ 1.21
CLN6-222ENST00000637667 SLKQ9H2G2 1235 aaPredicted RBP22.64■■□□□ 1.21
CLN6-222ENST00000637667 ADAMTS10Q9H324 1103 aa22.64■■□□□ 1.21
CLN6-222ENST00000637667 CLDND1Q9NY35 253 aa22.64■■□□□ 1.21
CLN6-222ENST00000637667 TPCN1Q9ULQ1 816 aa22.64■■□□□ 1.21
CLN6-222ENST00000637667 KCNJ14Q9UNX9 436 aa22.64■■□□□ 1.21
CLN6-222ENST00000637667 GRXCR2A6NFK2 248 aa22.63■■□□□ 1.21
CLN6-222ENST00000637667 PFKFB2O60825 505 aa22.63■■□□□ 1.21
CLN6-222ENST00000637667 CSPG5O95196 566 aa22.63■■□□□ 1.21
CLN6-222ENST00000637667 ITGB1P05556 798 aa22.63■■□□□ 1.21
CLN6-222ENST00000637667 IL9P15248 144 aa22.63■■□□□ 1.21
CLN6-222ENST00000637667 HYAL1Q12794 435 aa22.63■■□□□ 1.21
CLN6-222ENST00000637667 CAMK1Q14012 370 aa22.63■■□□□ 1.21
CLN6-222ENST00000637667 DSC3Q14574 896 aa22.63■■□□□ 1.21
CLN6-222ENST00000637667 INF2Q27J81 1249 aa22.63■■□□□ 1.21
CLN6-222ENST00000637667 B3GNT9Q6UX72 402 aa22.63■■□□□ 1.21
CLN6-222ENST00000637667 KLHL23Q8NBE8 558 aa22.63■■□□□ 1.21
CLN6-222ENST00000637667 ETNPPLQ8TBG4 499 aa22.63■■□□□ 1.21
CLN6-222ENST00000637667 SPPL3Q8TCT6 385 aa22.63■■□□□ 1.21
CLN6-222ENST00000637667 C1QTNF1Q9BXJ1 281 aa22.63■■□□□ 1.21
CLN6-222ENST00000637667 STK36Q9NRP7 1315 aa22.62■■□□□ 1.21
CLN6-222ENST00000637667 ANAPC15P60006 121 aa22.62■■□□□ 1.21
CLN6-222ENST00000637667 FAM189BP81408 668 aa22.62■■□□□ 1.21
CLN6-222ENST00000637667 TBC1D8BQ0IIM8 1120 aa22.62■■□□□ 1.21
CLN6-222ENST00000637667 TARBP2Q15633 366 aaKnown RBP22.62■■□□□ 1.21
CLN6-222ENST00000637667 FAM178BQ8IXR5 827 aa22.62■■□□□ 1.21
CLN6-222ENST00000637667 PHF20Q9BVI0 1012 aa22.62■■□□□ 1.21
CLN6-222ENST00000637667 CD320Q9NPF0 282 aa22.62■■□□□ 1.21
CLN6-222ENST00000637667 DDX25Q9UHL0 483 aaKnown RBP22.62■■□□□ 1.21
CLN6-222ENST00000637667 TBKBP1A7MCY6 615 aa22.61■■□□□ 1.21
CLN6-222ENST00000637667 EIF4BP23588 611 aaKnown RBP22.61■■□□□ 1.21
CLN6-222ENST00000637667 DNAJB1P25685 340 aa22.61■■□□□ 1.21
CLN6-222ENST00000637667 CTC1Q2NKJ3 1217 aa22.61■■□□□ 1.21
CLN6-222ENST00000637667 XKR3Q5GH77 459 aa22.61■■□□□ 1.21
CLN6-222ENST00000637667 FAM102BQ5T8I3 360 aa22.61■■□□□ 1.21
CLN6-222ENST00000637667 EPHX3Q9H6B9 360 aa22.61■■□□□ 1.21
CLN6-222ENST00000637667 ATP6V0A4Q9HBG4 840 aa22.61■■□□□ 1.21
CLN6-222ENST00000637667 TMEM161AQ9NX61 479 aa22.61■■□□□ 1.21
CLN6-222ENST00000637667 SEPT9Q9UHD8 586 aaPredicted RBP22.61■■□□□ 1.21
CLN6-222ENST00000637667 CCDC194A0A1B0GVG4 234 aa22.6■■□□□ 1.21
CLN6-222ENST00000637667 SLC37A4O43826 429 aa22.6■■□□□ 1.21
CLN6-222ENST00000637667 XBP1P17861 261 aa22.6■■□□□ 1.21
CLN6-222ENST00000637667 LTBRP36941 435 aa22.6■■□□□ 1.21
CLN6-222ENST00000637667 GPC3P51654 580 aa22.6■■□□□ 1.21
CLN6-222ENST00000637667 LETM2Q2VYF4 491 aa22.6■■□□□ 1.21
CLN6-222ENST00000637667 ZNF668Q96K58 619 aaPredicted RBP22.6■■□□□ 1.21
CLN6-222ENST00000637667 SCLT1Q96NL6 688 aa22.6■■□□□ 1.21
CLN6-222ENST00000637667 NIFKQ9BYG3 293 aaKnown RBP22.6■■□□□ 1.21
CLN6-222ENST00000637667 ELAC1Q9H777 363 aaKnown RBP22.6■■□□□ 1.21
CLN6-222ENST00000637667 STBD1O95210 358 aa22.59■■□□□ 1.21
CLN6-222ENST00000637667 DARSP14868 501 aaKnown RBP22.59■■□□□ 1.21
CLN6-222ENST00000637667 ANKRD1Q15327 319 aa22.59■■□□□ 1.21
CLN6-222ENST00000637667 MTERF2Q49AM1 385 aa22.59■■□□□ 1.21
CLN6-222ENST00000637667 SPOUT1Q5T280 376 aaKnown RBP22.59■■□□□ 1.21
CLN6-222ENST00000637667 ERICH6BQ5W0A0 696 aa22.59■■□□□ 1.21
CLN6-222ENST00000637667 GJD3Q8N144 294 aa22.59■■□□□ 1.21
CLN6-222ENST00000637667 POF1BQ8WVV4 589 aa22.59■■□□□ 1.21
CLN6-222ENST00000637667 KHSRPQ92945 711 aaKnown RBP eCLIP22.59■■□□□ 1.218e-8■□□□□ 8.3
CLN6-222ENST00000637667 PPP2R3CQ969Q6 453 aa22.59■■□□□ 1.21
CLN6-222ENST00000637667 AAASQ9NRG9 546 aa22.59■■□□□ 1.21
CLN6-222ENST00000637667 FAM50BQ9Y247 325 aa22.59■■□□□ 1.21
CLN6-222ENST00000637667 PCDHB12Q9Y5F1 795 aa22.59■■□□□ 1.21
CLN6-222ENST00000637667 TMEM150BA6NC51 233 aa22.58■■□□□ 1.21
CLN6-222ENST00000637667 DTNBO60941 627 aa22.58■■□□□ 1.21
CLN6-222ENST00000637667 CTDNEP1O95476 244 aa22.58■■□□□ 1.21
CLN6-222ENST00000637667 FGFR1P11362 822 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms