RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 TOMM70O94826 608 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 LCA5LO95447 670 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 SERPING1P05155 500 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 RSPH10BP0C881 870 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 HOXD13P35453 343 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 CASP5P51878 434 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 GTF2BQ00403 316 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 ENPEPQ07075 957 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 KIF5AQ12840 1032 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 PPIL2Q13356 520 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 C10orf76Q5T2E6 689 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 SFMBT2Q5VUG0 894 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 PDXDC1Q6P996 788 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 KCNV1Q6PIU1 500 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 GBP6Q6ZN66 633 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 KIAA1328Q86T90 577 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 SYCP3Q8IZU3 236 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 ANKRD35Q8N283 1001 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 PDCL2Q8N4E4 241 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 MNS1Q8NEH6 495 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 ANKRD7Q92527 254 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 KIFAP3Q92845 792 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 KCNN1Q92952 543 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 EEF2KMTQ96G04 330 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 FIZ1Q96SL8 496 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 A1CFQ9NQ94 594 aaKnown RBP11.4□□□□□ -0.58
VPS25-203ENST00000589520 AIPL1Q9NZN9 384 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 WRAP73Q9P2S5 460 aaPredicted RBP11.4□□□□□ -0.58
VPS25-203ENST00000589520 SLC9A2Q9UBY0 812 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 PPME1Q9Y570 386 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 SSC5DA1L4H1 1573 aa11.4□□□□□ -0.58
VPS25-203ENST00000589520 ASTN1O14525 1302 aa11.39□□□□□ -0.59
VPS25-203ENST00000589520 LOXHD1Q8IVV2 1947 aa11.39□□□□□ -0.59
VPS25-203ENST00000589520 SFI1A8K8P3 1242 aa11.39□□□□□ -0.59
VPS25-203ENST00000589520 EFCAB8A8MWE9 144 aa11.39□□□□□ -0.59
VPS25-203ENST00000589520 P4HA2O15460 535 aa11.39□□□□□ -0.59
VPS25-203ENST00000589520 ATP9AO75110 1047 aa11.39□□□□□ -0.59
VPS25-203ENST00000589520 N4BP1O75113 896 aaKnown RBP11.39□□□□□ -0.59
VPS25-203ENST00000589520 DGAT1O75907 488 aa11.39□□□□□ -0.59
VPS25-203ENST00000589520 CCDC172P0C7W6 258 aa11.39□□□□□ -0.59
VPS25-203ENST00000589520 TGFB3P10600 412 aa11.39□□□□□ -0.59
VPS25-203ENST00000589520 KCNA2P16389 499 aa11.39□□□□□ -0.59
VPS25-203ENST00000589520 RFX1P22670 979 aa11.39□□□□□ -0.59
VPS25-203ENST00000589520 NMT1P30419 496 aaKnown RBP11.39□□□□□ -0.59
VPS25-203ENST00000589520 VAV2P52735 878 aa11.39□□□□□ -0.59
VPS25-203ENST00000589520 MCCD1P59942 119 aaPredicted RBP11.39□□□□□ -0.59
VPS25-203ENST00000589520 IRX3P78415 501 aaPredicted RBP11.39□□□□□ -0.59
VPS25-203ENST00000589520 CETN1Q12798 172 aa11.39□□□□□ -0.59
VPS25-203ENST00000589520 MAPK7Q13164 816 aa11.39□□□□□ -0.59
VPS25-203ENST00000589520 PLS1Q14651 629 aa11.39□□□□□ -0.59
VPS25-203ENST00000589520 EXOC3L4Q17RC7 722 aa11.39□□□□□ -0.59
VPS25-203ENST00000589520 RRAGAQ7L523 313 aa11.39□□□□□ -0.59
VPS25-203ENST00000589520 PNMA8AQ86V59 439 aaPredicted RBP11.39□□□□□ -0.59
VPS25-203ENST00000589520 FAM186BQ8IYM0 893 aa11.39□□□□□ -0.59
VPS25-203ENST00000589520 CEP112Q8N8E3 955 aa11.39□□□□□ -0.59
VPS25-203ENST00000589520 ACRBPQ8NEB7 543 aa11.39□□□□□ -0.59
VPS25-203ENST00000589520 MCPH1Q8NEM0 835 aa11.39□□□□□ -0.59
VPS25-203ENST00000589520 SPIRE2Q8WWL2 714 aa11.39□□□□□ -0.59
VPS25-203ENST00000589520 BAP1Q92560 729 aa11.39□□□□□ -0.59
VPS25-203ENST00000589520 NTPCRQ9BSD7 190 aaKnown RBP11.39□□□□□ -0.59
VPS25-203ENST00000589520 DEF6Q9H4E7 631 aa11.39□□□□□ -0.59
VPS25-203ENST00000589520 JPH1Q9HDC5 661 aaPredicted RBP11.39□□□□□ -0.59
VPS25-203ENST00000589520 LZTFL1Q9NQ48 299 aa11.39□□□□□ -0.59
VPS25-203ENST00000589520 FAM207AQ9NSI2 230 aaPredicted RBP11.39□□□□□ -0.59
VPS25-203ENST00000589520 TNRC18O15417 2968 aaPredicted RBP11.39□□□□□ -0.59
VPS25-203ENST00000589520 PHIPQ8WWQ0 1821 aa11.38□□□□□ -0.59
VPS25-203ENST00000589520 RBAK-RBAKDNI3L0D1 243 aa11.38□□□□□ -0.59
VPS25-203ENST00000589520 K7ENM7 598 aa11.38□□□□□ -0.59
VPS25-203ENST00000589520 ZBTB39O15060 712 aa11.38□□□□□ -0.59
VPS25-203ENST00000589520 PMM2O15305 246 aa11.38□□□□□ -0.59
VPS25-203ENST00000589520 RRP9O43818 475 aaKnown RBP11.38□□□□□ -0.59
VPS25-203ENST00000589520 AKR1B10O60218 316 aa11.38□□□□□ -0.59
VPS25-203ENST00000589520 AKAP3O75969 853 aa11.38□□□□□ -0.59
VPS25-203ENST00000589520 ATG7O95352 703 aa11.38□□□□□ -0.59
VPS25-203ENST00000589520 CCNE2O96020 404 aa11.38□□□□□ -0.59
VPS25-203ENST00000589520 KRT13P13646 458 aa11.38□□□□□ -0.59
VPS25-203ENST00000589520 EPHX2P34913 555 aa11.38□□□□□ -0.59
VPS25-203ENST00000589520 ARHGAP25P42331 645 aa11.38□□□□□ -0.59
VPS25-203ENST00000589520 KLK7P49862 253 aa11.38□□□□□ -0.59
VPS25-203ENST00000589520 NEDD9Q14511 834 aa11.38□□□□□ -0.59
VPS25-203ENST00000589520 XKR9Q5GH70 373 aa11.38□□□□□ -0.59
VPS25-203ENST00000589520 XKR3Q5GH77 459 aa11.38□□□□□ -0.59
VPS25-203ENST00000589520 ZNF569Q5MCW4 686 aa11.38□□□□□ -0.59
VPS25-203ENST00000589520 INTS8Q75QN2 995 aaKnown RBP11.38□□□□□ -0.59
VPS25-203ENST00000589520 USP37Q86T82 979 aa11.38□□□□□ -0.59
VPS25-203ENST00000589520 EXOC8Q8IYI6 725 aa11.38□□□□□ -0.59
VPS25-203ENST00000589520 RNF10Q8N5U6 811 aaKnown RBP11.38□□□□□ -0.59
VPS25-203ENST00000589520 BORCS6Q96GS4 357 aa11.38□□□□□ -0.59
VPS25-203ENST00000589520 WNK4Q96J92 1243 aa11.38□□□□□ -0.59
VPS25-203ENST00000589520 ZFP91Q96JP5 570 aaPredicted RBP11.38□□□□□ -0.59
VPS25-203ENST00000589520 NAPGQ99747 312 aaPredicted RBP11.38□□□□□ -0.59
VPS25-203ENST00000589520 LSM14BQ9BX40 385 aaKnown RBP11.38□□□□□ -0.59
VPS25-203ENST00000589520 SPATC1LQ9H0A9 340 aa11.38□□□□□ -0.59
VPS25-203ENST00000589520 PDCL3Q9H2J4 239 aa11.38□□□□□ -0.59
VPS25-203ENST00000589520 AGPAT3Q9NRZ7 376 aa11.38□□□□□ -0.59
VPS25-203ENST00000589520 PKD2L1Q9P0L9 805 aa11.38□□□□□ -0.59
VPS25-203ENST00000589520 CDC23Q9UJX2 597 aa11.38□□□□□ -0.59
VPS25-203ENST00000589520 ZNF215Q9UL58 517 aaPredicted RBP11.38□□□□□ -0.59
VPS25-203ENST00000589520 AGTPBP1Q9UPW5 1226 aa11.38□□□□□ -0.59
VPS25-203ENST00000589520 ATP8B3O60423 1300 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms