RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 TPRNQ4KMQ1 711 aa13.52□□□□□ -0.25
ACTN1-221ENST00000556571 WWC2Q6AWC2 1192 aa13.52□□□□□ -0.25
ACTN1-221ENST00000556571 PPP1R18Q6NYC8 613 aa13.52□□□□□ -0.25
ACTN1-221ENST00000556571 MIS18BP1Q6P0N0 1132 aa13.52□□□□□ -0.25
ACTN1-221ENST00000556571 PDXDC2PQ6P474 469 aa13.52□□□□□ -0.25
ACTN1-221ENST00000556571 SYNE3Q6ZMZ3 975 aa13.52□□□□□ -0.25
ACTN1-221ENST00000556571 NIPA1Q7RTP0 329 aa13.52□□□□□ -0.25
ACTN1-221ENST00000556571 FAM228AQ86W67 206 aa13.52□□□□□ -0.25
ACTN1-221ENST00000556571 RAB11FIP4Q86YS3 637 aa13.52□□□□□ -0.25
ACTN1-221ENST00000556571 CASP10Q92851 521 aa13.52□□□□□ -0.25
ACTN1-221ENST00000556571 ZNF558Q96NG5 402 aa13.52□□□□□ -0.25
ACTN1-221ENST00000556571 ANO3Q9BYT9 981 aa13.52□□□□□ -0.25
ACTN1-221ENST00000556571 GLT8D2Q9H1C3 349 aa13.52□□□□□ -0.25
ACTN1-221ENST00000556571 KIAA1671Q9BY89 1806 aa13.52□□□□□ -0.25
ACTN1-221ENST00000556571 CFAP54Q96N23 3096 aa13.51□□□□□ -0.25
ACTN1-221ENST00000556571 HIDE1A8MVS5 230 aa13.51□□□□□ -0.25
ACTN1-221ENST00000556571 ZBTB42B2RXF5 422 aa13.51□□□□□ -0.25
ACTN1-221ENST00000556571 H0Y858 1186 aa13.51□□□□□ -0.25
ACTN1-221ENST00000556571 DDX39AO00148 427 aaKnown RBP13.51□□□□□ -0.25
ACTN1-221ENST00000556571 SREBF1P36956 1147 aa13.51□□□□□ -0.25
ACTN1-221ENST00000556571 ADCY7P51828 1080 aa13.51□□□□□ -0.25
ACTN1-221ENST00000556571 AP3B2Q13367 1082 aa13.51□□□□□ -0.25
ACTN1-221ENST00000556571 DSC3Q14574 896 aa13.51□□□□□ -0.25
ACTN1-221ENST00000556571 CES5AQ6NT32 575 aa13.51□□□□□ -0.25
ACTN1-221ENST00000556571 SWSAP1Q6NVH7 229 aa13.51□□□□□ -0.25
ACTN1-221ENST00000556571 LLGL2Q6P1M3 1020 aa13.51□□□□□ -0.25
ACTN1-221ENST00000556571 KCNT2Q6UVM3 1135 aa13.51□□□□□ -0.25
ACTN1-221ENST00000556571 TMC7Q7Z402 723 aa13.51□□□□□ -0.25
ACTN1-221ENST00000556571 SGMS1Q86VZ5 419 aa13.51□□□□□ -0.25
ACTN1-221ENST00000556571 MICU3Q86XE3 530 aa13.51□□□□□ -0.25
ACTN1-221ENST00000556571 CCDC60Q8IWA6 550 aaPredicted RBP13.51□□□□□ -0.25
ACTN1-221ENST00000556571 UBALD2Q8IYN6 164 aa13.51□□□□□ -0.25
ACTN1-221ENST00000556571 KREMEN2Q8NCW0 462 aa13.51□□□□□ -0.25
ACTN1-221ENST00000556571 BBXQ8WY36 941 aaPredicted RBP13.51□□□□□ -0.25
ACTN1-221ENST00000556571 PGBD1Q96JS3 809 aa13.51□□□□□ -0.25
ACTN1-221ENST00000556571 NECTIN4Q96NY8 510 aa13.51□□□□□ -0.25
ACTN1-221ENST00000556571 CASD1Q96PB1 797 aa13.51□□□□□ -0.25
ACTN1-221ENST00000556571 OSMRQ99650 979 aa13.51□□□□□ -0.25
ACTN1-221ENST00000556571 APOL5Q9BWW9 433 aa13.51□□□□□ -0.25
ACTN1-221ENST00000556571 SPG21Q9NZD8 308 aa13.51□□□□□ -0.25
ACTN1-221ENST00000556571 FAM186AA6NE01 2351 aa13.51□□□□□ -0.25
ACTN1-221ENST00000556571 PLXNA4Q9HCM2 1894 aa13.5□□□□□ -0.25
ACTN1-221ENST00000556571 SMCO2A6NFE2 343 aa13.5□□□□□ -0.25
ACTN1-221ENST00000556571 PROB1E7EW31 1015 aa13.5□□□□□ -0.25
ACTN1-221ENST00000556571 hCG_1984214I3L0E3 225 aa13.5□□□□□ -0.25
ACTN1-221ENST00000556571 DHX15O43143 795 aaKnown RBP13.5□□□□□ -0.25
ACTN1-221ENST00000556571 GALR2O43603 387 aaPredicted RBP13.5□□□□□ -0.25
ACTN1-221ENST00000556571 GPR32O75388 356 aa13.5□□□□□ -0.25
ACTN1-221ENST00000556571 C22orf31O95567 290 aa13.5□□□□□ -0.25
ACTN1-221ENST00000556571 PDGFBP01127 241 aaPredicted RBP13.5□□□□□ -0.25
ACTN1-221ENST00000556571 ZSCAN20P17040 1043 aaPredicted RBP13.5□□□□□ -0.25
ACTN1-221ENST00000556571 ATP4AP20648 1035 aa13.5□□□□□ -0.25
ACTN1-221ENST00000556571 FOXK2Q01167 660 aa13.5□□□□□ -0.25
ACTN1-221ENST00000556571 ITIH3Q06033 890 aa13.5□□□□□ -0.25
ACTN1-221ENST00000556571 MTMR3Q13615 1198 aa13.5□□□□□ -0.25
ACTN1-221ENST00000556571 TYW1BQ6NUM6 668 aa13.5□□□□□ -0.25
ACTN1-221ENST00000556571 LRRC55Q6ZSA7 311 aa13.5□□□□□ -0.25
ACTN1-221ENST00000556571 PLA2G4DQ86XP0 818 aa13.5□□□□□ -0.25
ACTN1-221ENST00000556571 CKAP2LQ8IYA6 745 aa13.5□□□□□ -0.25
ACTN1-221ENST00000556571 ABI1Q8IZP0 508 aa13.5□□□□□ -0.25
ACTN1-221ENST00000556571 ZNF710Q8N1W2 664 aa13.5□□□□□ -0.25
ACTN1-221ENST00000556571 LRRC43Q8N309 656 aa13.5□□□□□ -0.25
ACTN1-221ENST00000556571 METTL13Q8N6R0 699 aa13.5□□□□□ -0.25
ACTN1-221ENST00000556571 ZNF713Q8N859 430 aaPredicted RBP13.5□□□□□ -0.25
ACTN1-221ENST00000556571 MRPL43Q8N983 215 aaKnown RBP13.5□□□□□ -0.25
ACTN1-221ENST00000556571 PPP1R16BQ96T49 567 aa13.5□□□□□ -0.25
ACTN1-221ENST00000556571 ADAM7Q9H2U9 754 aa13.5□□□□□ -0.25
ACTN1-221ENST00000556571 TSHZ2Q9NRE2 1034 aa13.5□□□□□ -0.25
ACTN1-221ENST00000556571 RBM28Q9NW13 759 aaKnown RBP13.5□□□□□ -0.25
ACTN1-221ENST00000556571 SORCS3Q9UPU3 1222 aa13.5□□□□□ -0.25
ACTN1-221ENST00000556571 MAFBQ9Y5Q3 323 aaPredicted RBP13.5□□□□□ -0.25
ACTN1-221ENST00000556571 LOXHD1Q8IVV2 1947 aa13.49□□□□□ -0.25
ACTN1-221ENST00000556571 FNDC1Q4ZHG4 1894 aaPredicted RBP13.49□□□□□ -0.25
ACTN1-221ENST00000556571 CNTNAP5Q8WYK1 1306 aa13.49□□□□□ -0.25
ACTN1-221ENST00000556571 IPO5O00410 1097 aaKnown RBP13.49□□□□□ -0.25
ACTN1-221ENST00000556571 SLC27A2O14975 620 aa13.49□□□□□ -0.25
ACTN1-221ENST00000556571 MAGEB2O15479 319 aa13.49□□□□□ -0.25
ACTN1-221ENST00000556571 VTNP04004 478 aa13.49□□□□□ -0.25
ACTN1-221ENST00000556571 SP100P23497 879 aaPredicted RBP13.49□□□□□ -0.25
ACTN1-221ENST00000556571 COL9A3Q14050 684 aaPredicted RBP13.49□□□□□ -0.25
ACTN1-221ENST00000556571 SMC1AQ14683 1233 aaKnown RBP13.49□□□□□ -0.25
ACTN1-221ENST00000556571 BMS1Q14692 1282 aaKnown RBP13.49□□□□□ -0.25
ACTN1-221ENST00000556571 LRRC2Q9BYS8 371 aa13.49□□□□□ -0.25
ACTN1-221ENST00000556571 LSG1Q9H089 658 aaKnown RBP13.49□□□□□ -0.25
ACTN1-221ENST00000556571 TBC1D22BQ9NU19 505 aa13.49□□□□□ -0.25
ACTN1-221ENST00000556571 RNF19AQ9NV58 838 aa13.49□□□□□ -0.25
ACTN1-221ENST00000556571 BARHL2Q9NY43 387 aa13.49□□□□□ -0.25
ACTN1-221ENST00000556571 CEP131Q9UPN4 1083 aa13.49□□□□□ -0.25
ACTN1-221ENST00000556571 V9GY48 417 aaPredicted RBP13.49□□□□□ -0.25
ACTN1-221ENST00000556571 KMT2EQ8IZD2 1858 aa13.48□□□□□ -0.25
ACTN1-221ENST00000556571 C2orf71A6NGG8 1288 aa13.48□□□□□ -0.25
ACTN1-221ENST00000556571 FAM86B1E9PN63 330 aa13.48□□□□□ -0.25
ACTN1-221ENST00000556571 CYP3A4P08684 503 aa13.48□□□□□ -0.25
ACTN1-221ENST00000556571 FAM86B2P0C5J1 330 aa13.48□□□□□ -0.25
ACTN1-221ENST00000556571 TMOD1P28289 359 aa13.48□□□□□ -0.25
ACTN1-221ENST00000556571 MTHFRP42898 656 aa13.48□□□□□ -0.25
ACTN1-221ENST00000556571 CLK2P49760 499 aaKnown RBP13.48□□□□□ -0.25
ACTN1-221ENST00000556571 FUT2Q10981 343 aa13.48□□□□□ -0.25
ACTN1-221ENST00000556571 CREB3L3Q68CJ9 461 aa13.48□□□□□ -0.25
ACTN1-221ENST00000556571 ZNF746Q6NUN9 644 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms