RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 KIAA0754O94854 1291 aa12.63□□□□□ -0.39
USP35-207ENST00000530546 GNA14O95837 355 aa12.63□□□□□ -0.39
USP35-207ENST00000530546 ATP1A1P05023 1023 aaKnown RBP12.63□□□□□ -0.39
USP35-207ENST00000530546 ICAM1P05362 532 aa12.63□□□□□ -0.39
USP35-207ENST00000530546 HOXA7P31268 230 aaPredicted RBP12.63□□□□□ -0.39
USP35-207ENST00000530546 GGCXP38435 758 aa12.63□□□□□ -0.39
USP35-207ENST00000530546 FNTAP49354 379 aa12.63□□□□□ -0.39
USP35-207ENST00000530546 AMPD2Q01433 879 aa12.63□□□□□ -0.39
USP35-207ENST00000530546 KCNH2Q12809 1159 aa12.63□□□□□ -0.39
USP35-207ENST00000530546 KIF5AQ12840 1032 aa12.63□□□□□ -0.39
USP35-207ENST00000530546 MTMR2Q13614 643 aa12.63□□□□□ -0.39
USP35-207ENST00000530546 ZC2HC1CQ53FD0 456 aaPredicted RBP12.63□□□□□ -0.39
USP35-207ENST00000530546 NBPF12Q5TAG4 269 aaPredicted RBP12.63□□□□□ -0.39
USP35-207ENST00000530546 PDXDC1Q6P996 788 aa12.63□□□□□ -0.39
USP35-207ENST00000530546 ANKRD13CQ8N6S4 541 aa12.63□□□□□ -0.39
USP35-207ENST00000530546 CAPZA3Q96KX2 299 aa12.63□□□□□ -0.39
USP35-207ENST00000530546 TEKT3Q9BXF9 490 aa12.63□□□□□ -0.39
USP35-207ENST00000530546 HACL1Q9UJ83 578 aa12.63□□□□□ -0.39
USP35-207ENST00000530546 CAPN7Q9Y6W3 813 aa12.63□□□□□ -0.39
USP35-207ENST00000530546 PSME4Q14997 1843 aa12.63□□□□□ -0.39
USP35-207ENST00000530546 H0YHG0 523 aa12.63□□□□□ -0.39
USP35-207ENST00000530546 ITGB5P18084 799 aa12.63□□□□□ -0.39
USP35-207ENST00000530546 PLS1Q14651 629 aa12.63□□□□□ -0.39
USP35-207ENST00000530546 PREPLQ4J6C6 727 aaPredicted RBP12.63□□□□□ -0.39
USP35-207ENST00000530546 YTHDF3Q7Z739 585 aaKnown RBP12.63□□□□□ -0.39
USP35-207ENST00000530546 IFIH1Q9BYX4 1025 aaKnown RBP12.63□□□□□ -0.39
USP35-207ENST00000530546 WDR11Q9BZH6 1224 aa12.63□□□□□ -0.39
USP35-207ENST00000530546 TUFT1Q9NNX1 390 aa12.63□□□□□ -0.39
USP35-207ENST00000530546 CNOT7Q9UIV1 285 aaKnown RBP12.63□□□□□ -0.39
USP35-207ENST00000530546 PCDHB13Q9Y5F0 798 aa12.63□□□□□ -0.39
USP35-207ENST00000530546 ACTN1P12814 892 aa12.63□□□□□ -0.39
USP35-207ENST00000530546 EIF2AK2P19525 551 aaKnown RBP12.63□□□□□ -0.39
USP35-207ENST00000530546 NF2P35240 595 aa12.63□□□□□ -0.39
USP35-207ENST00000530546 CASP4P49662 377 aa12.63□□□□□ -0.39
USP35-207ENST00000530546 PPP2R5CQ13362 524 aa12.63□□□□□ -0.39
USP35-207ENST00000530546 TNFAIP1Q13829 316 aa12.63□□□□□ -0.39
USP35-207ENST00000530546 RAPGEF1Q13905 1077 aa12.63□□□□□ -0.39
USP35-207ENST00000530546 PURBQ96QR8 312 aaKnown RBP12.63□□□□□ -0.39
USP35-207ENST00000530546 SH2D3AQ9BRG2 576 aa12.63□□□□□ -0.39
USP35-207ENST00000530546 MXRA8Q9BRK3 442 aa12.63□□□□□ -0.39
USP35-207ENST00000530546 DEFB129Q9H1M3 183 aa12.63□□□□□ -0.39
USP35-207ENST00000530546 MLXIPQ9HAP2 919 aa12.63□□□□□ -0.39
USP35-207ENST00000530546 ARMCX3Q9UH62 379 aaPredicted RBP12.63□□□□□ -0.39
USP35-207ENST00000530546 SAMM50Q9Y512 469 aa12.63□□□□□ -0.39
USP35-207ENST00000530546 PCDHA13Q9Y5I0 950 aa12.63□□□□□ -0.39
USP35-207ENST00000530546 GRIN2DO15399 1336 aa12.62□□□□□ -0.39
USP35-207ENST00000530546 CALUO43852 315 aaPredicted RBP12.62□□□□□ -0.39
USP35-207ENST00000530546 PLA2G6O60733 806 aa12.62□□□□□ -0.39
USP35-207ENST00000530546 NOL4O94818 638 aa12.62□□□□□ -0.39
USP35-207ENST00000530546 VAV2P52735 878 aa12.62□□□□□ -0.39
USP35-207ENST00000530546 GFPT1Q06210 699 aaPredicted RBP12.62□□□□□ -0.39
USP35-207ENST00000530546 SPP2Q13103 211 aa12.62□□□□□ -0.39
USP35-207ENST00000530546 SKIDA1Q1XH10 827 aa12.62□□□□□ -0.39
USP35-207ENST00000530546 EDRF1Q3B7T1 1238 aa12.62□□□□□ -0.39
USP35-207ENST00000530546 EPM2AIP1Q7L775 607 aaPredicted RBP12.62□□□□□ -0.39
USP35-207ENST00000530546 IQCDQ96DY2 449 aa12.62□□□□□ -0.39
USP35-207ENST00000530546 LXNQ9BS40 222 aa12.62□□□□□ -0.39
USP35-207ENST00000530546 GOLGA8KD6RF30 607 aa12.62□□□□□ -0.39
USP35-207ENST00000530546 WDR46O15213 610 aaKnown RBP12.62□□□□□ -0.39
USP35-207ENST00000530546 AKAP3O75969 853 aa12.62□□□□□ -0.39
USP35-207ENST00000530546 NR3C1P04150 777 aa12.62□□□□□ -0.39
USP35-207ENST00000530546 MYCLP12524 364 aaPredicted RBP12.62□□□□□ -0.39
USP35-207ENST00000530546 CDK17Q00537 523 aa12.62□□□□□ -0.39
USP35-207ENST00000530546 MAP3K10Q02779 954 aa12.62□□□□□ -0.39
USP35-207ENST00000530546 PLCB4Q15147 1175 aa12.62□□□□□ -0.39
USP35-207ENST00000530546 FOXR2Q6PJQ5 311 aa12.62□□□□□ -0.39
USP35-207ENST00000530546 PPP4R3CPQ6ZMV5 832 aa12.62□□□□□ -0.39
USP35-207ENST00000530546 MICALCLQ6ZW33 695 aa12.62□□□□□ -0.39
USP35-207ENST00000530546 CLEC4DQ8WXI8 215 aa12.62□□□□□ -0.39
USP35-207ENST00000530546 ZKSCAN4Q969J2 545 aaPredicted RBP12.62□□□□□ -0.39
USP35-207ENST00000530546 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.62□□□□□ -0.39
USP35-207ENST00000530546 HNRNPH3P31942 346 aaKnown RBP12.61□□□□□ -0.39
USP35-207ENST00000530546 MAGEA1P43355 309 aa12.61□□□□□ -0.39
USP35-207ENST00000530546 SFMBT2Q5VUG0 894 aa12.61□□□□□ -0.39
USP35-207ENST00000530546 NSMFQ6X4W1 530 aa12.61□□□□□ -0.39
USP35-207ENST00000530546 C1orf186Q6ZWK4 172 aa12.61□□□□□ -0.39
USP35-207ENST00000530546 MIER3Q7Z3K6 550 aa12.61□□□□□ -0.39
USP35-207ENST00000530546 OTUD6BQ8N6M0 293 aa12.61□□□□□ -0.39
USP35-207ENST00000530546 PAGR1Q9BTK6 254 aa12.61□□□□□ -0.39
USP35-207ENST00000530546 RPAP3Q9H6T3 665 aaPredicted RBP12.61□□□□□ -0.39
USP35-207ENST00000530546 KCNH7Q9NS40 1196 aa12.61□□□□□ -0.39
USP35-207ENST00000530546 TRAF3IP3Q9Y228 551 aa12.61□□□□□ -0.39
USP35-207ENST00000530546 ARHGEF35A5YM69 484 aa12.61□□□□□ -0.39
USP35-207ENST00000530546 GOLGA6BA6NDN3 693 aa12.61□□□□□ -0.39
USP35-207ENST00000530546 AGPSO00116 658 aa12.61□□□□□ -0.39
USP35-207ENST00000530546 MEFVO15553 781 aaPredicted RBP12.61□□□□□ -0.39
USP35-207ENST00000530546 USO1O60763 962 aaKnown RBP12.61□□□□□ -0.39
USP35-207ENST00000530546 MOCS3O95396 460 aa12.61□□□□□ -0.39
USP35-207ENST00000530546 VCAM1P19320 739 aa12.61□□□□□ -0.39
USP35-207ENST00000530546 SLC9A1P19634 815 aa12.61□□□□□ -0.39
USP35-207ENST00000530546 COG2Q14746 738 aa12.61□□□□□ -0.39
USP35-207ENST00000530546 EPHA7Q15375 998 aa12.61□□□□□ -0.39
USP35-207ENST00000530546 WLSQ5T9L3 541 aa12.61□□□□□ -0.39
USP35-207ENST00000530546 FMNL3Q8IVF7 1028 aa12.61□□□□□ -0.39
USP35-207ENST00000530546 FAM212AQ96EL1 285 aa12.61□□□□□ -0.39
USP35-207ENST00000530546 NACC1Q96RE7 527 aa12.61□□□□□ -0.39
USP35-207ENST00000530546 TAAR1Q96RJ0 339 aa12.61□□□□□ -0.39
USP35-207ENST00000530546 SH3GL2Q99962 352 aa12.61□□□□□ -0.39
USP35-207ENST00000530546 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.61□□□□□ -0.39
USP35-207ENST00000530546 TYW1Q9NV66 732 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms