RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 IKBKEQ14164 716 aa21.08■□□□□ 0.97
AGRN-208ENST00000479707 PLEKHG4Q58EX7 1191 aa21.08■□□□□ 0.97
AGRN-208ENST00000479707 FBXO47Q5MNV8 452 aa21.08■□□□□ 0.97
AGRN-208ENST00000479707 IGSF22Q8N9C0 903 aa21.08■□□□□ 0.97
AGRN-208ENST00000479707 SEPT8Q92599 483 aa21.08■□□□□ 0.97
AGRN-208ENST00000479707 MAP7D2Q96T17 732 aa21.08■□□□□ 0.97
AGRN-208ENST00000479707 POLR3CQ9BUI4 534 aaPredicted RBP21.08■□□□□ 0.97
AGRN-208ENST00000479707 ZSCAN16Q9H4T2 348 aaPredicted RBP21.08■□□□□ 0.97
AGRN-208ENST00000479707 ARID2Q68CP9 1835 aa21.07■□□□□ 0.96
AGRN-208ENST00000479707 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.07■□□□□ 0.96
AGRN-208ENST00000479707 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.07■□□□□ 0.96
AGRN-208ENST00000479707 RPA1P27694 616 aa21.07■□□□□ 0.96
AGRN-208ENST00000479707 POLGP54098 1239 aaPredicted RBP21.07■□□□□ 0.96
AGRN-208ENST00000479707 NLRP11P59045 1033 aaKnown RBP21.07■□□□□ 0.96
AGRN-208ENST00000479707 MKRN4PQ13434 485 aaPredicted RBP21.07■□□□□ 0.96
AGRN-208ENST00000479707 PKP1Q13835 747 aa21.07■□□□□ 0.96
AGRN-208ENST00000479707 BECN1Q14457 450 aa21.07■□□□□ 0.96
AGRN-208ENST00000479707 ECM1Q16610 540 aa21.07■□□□□ 0.96
AGRN-208ENST00000479707 POTEGQ6S5H5 508 aa21.07■□□□□ 0.96
AGRN-208ENST00000479707 SNX29Q8TEQ0 813 aa21.07■□□□□ 0.96
AGRN-208ENST00000479707 CCDC43Q96MW1 224 aaKnown RBP21.07■□□□□ 0.96
AGRN-208ENST00000479707 IFIH1Q9BYX4 1025 aaKnown RBP21.07■□□□□ 0.96
AGRN-208ENST00000479707 AGO3Q9H9G7 860 aaKnown RBP21.07■□□□□ 0.96
AGRN-208ENST00000479707 IGKV6-21A0A0C4DH24 114 aa21.06■□□□□ 0.96
AGRN-208ENST00000479707 GPR32O75388 356 aa21.06■□□□□ 0.96
AGRN-208ENST00000479707 CD52P31358 61 aa21.06■□□□□ 0.96
AGRN-208ENST00000479707 DNM2P50570 870 aa21.06■□□□□ 0.96
AGRN-208ENST00000479707 ZRSR1Q15695 479 aaKnown RBP21.06■□□□□ 0.96
AGRN-208ENST00000479707 FOXD4L6Q3SYB3 417 aaPredicted RBP21.06■□□□□ 0.96
AGRN-208ENST00000479707 KRT79Q5XKE5 535 aa21.06■□□□□ 0.96
AGRN-208ENST00000479707 HAUS3Q68CZ6 603 aa21.06■□□□□ 0.96
AGRN-208ENST00000479707 FOXD4L3Q6VB84 417 aaPredicted RBP21.06■□□□□ 0.96
AGRN-208ENST00000479707 SLC7A3Q8WY07 619 aa21.06■□□□□ 0.96
AGRN-208ENST00000479707 OSMRQ99650 979 aa21.06■□□□□ 0.96
AGRN-208ENST00000479707 ANKEF1Q9NU02 776 aa21.06■□□□□ 0.96
AGRN-208ENST00000479707 SUCLA2Q9P2R7 463 aaPredicted RBP21.06■□□□□ 0.96
AGRN-208ENST00000479707 ABHD14A-ACY1A0A1B0GW23 586 aa21.05■□□□□ 0.96
AGRN-208ENST00000479707 BAIAP3O94812 1187 aa21.05■□□□□ 0.96
AGRN-208ENST00000479707 BMP15O95972 392 aa21.05■□□□□ 0.96
AGRN-208ENST00000479707 ZSCAN22P10073 491 aaPredicted RBP21.05■□□□□ 0.96
AGRN-208ENST00000479707 KCNJ6P48051 423 aa21.05■□□□□ 0.96
AGRN-208ENST00000479707 WDR5P61964 334 aaKnown RBP21.05■□□□□ 0.96
AGRN-208ENST00000479707 ARL6IP4Q66PJ3 421 aaKnown RBP21.05■□□□□ 0.96
AGRN-208ENST00000479707 TSHZ1Q6ZSZ6 1077 aa21.05■□□□□ 0.96
AGRN-208ENST00000479707 TMCO2Q7Z6W1 182 aaPredicted RBP21.05■□□□□ 0.96
AGRN-208ENST00000479707 TMEM40Q8WWA1 233 aa21.05■□□□□ 0.96
AGRN-208ENST00000479707 TMEM143Q96AN5 459 aa21.05■□□□□ 0.96
AGRN-208ENST00000479707 SCLT1Q96NL6 688 aa21.05■□□□□ 0.96
AGRN-208ENST00000479707 NACC1Q96RE7 527 aa21.05■□□□□ 0.96
AGRN-208ENST00000479707 JPH2Q9BR39 696 aaPredicted RBP21.05■□□□□ 0.96
AGRN-208ENST00000479707 DHX33Q9H6R0 707 aaKnown RBP21.05■□□□□ 0.96
AGRN-208ENST00000479707 KIAA1024Q9UPX6 916 aa21.05■□□□□ 0.96
AGRN-208ENST00000479707 KDM3AQ9Y4C1 1321 aa21.04■□□□□ 0.96
AGRN-208ENST00000479707 ATP2A2P16615 1042 aaKnown RBP21.04■□□□□ 0.96
AGRN-208ENST00000479707 MARCKSP29966 332 aaPredicted RBP21.04■□□□□ 0.96
AGRN-208ENST00000479707 RFC5P40937 340 aa21.04■□□□□ 0.96
AGRN-208ENST00000479707 RARRES1P49788 294 aa21.04■□□□□ 0.96
AGRN-208ENST00000479707 RABGGTBP53611 331 aa21.04■□□□□ 0.96
AGRN-208ENST00000479707 CRYBB1P53674 252 aaPredicted RBP21.04■□□□□ 0.96
AGRN-208ENST00000479707 DEFB103AP81534 67 aa21.04■□□□□ 0.96
AGRN-208ENST00000479707 GRIN1Q05586 938 aa21.04■□□□□ 0.96
AGRN-208ENST00000479707 NFX1Q12986 1120 aaKnown RBP21.04■□□□□ 0.96
AGRN-208ENST00000479707 EMC2Q15006 297 aa21.04■□□□□ 0.96
AGRN-208ENST00000479707 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.04■□□□□ 0.965e-15■■■■■ 27.2
AGRN-208ENST00000479707 RHPN2Q8IUC4 686 aa21.04■□□□□ 0.96
AGRN-208ENST00000479707 KSR1Q8IVT5 923 aa21.04■□□□□ 0.96
AGRN-208ENST00000479707 NLRP7Q8WX94 980 aa21.04■□□□□ 0.96
AGRN-208ENST00000479707 USP28Q96RU2 1077 aa21.04■□□□□ 0.96
AGRN-208ENST00000479707 DDX19AQ9NUU7 478 aaKnown RBP21.04■□□□□ 0.96
AGRN-208ENST00000479707 NOC2LQ9Y3T9 749 aaKnown RBP21.04■□□□□ 0.96
AGRN-208ENST00000479707 PPME1Q9Y570 386 aa21.04■□□□□ 0.96
AGRN-208ENST00000479707 STK24Q9Y6E0 443 aa21.04■□□□□ 0.96
AGRN-208ENST00000479707 MICAL3Q7RTP6 2002 aa21.04■□□□□ 0.96
AGRN-208ENST00000479707 MYH15Q9Y2K3 1946 aa21.04■□□□□ 0.96
AGRN-208ENST00000479707 GBF1Q92538 1859 aa21.03■□□□□ 0.96
AGRN-208ENST00000479707 RPS6KA5O75582 802 aa21.03■□□□□ 0.96
AGRN-208ENST00000479707 F13A1P00488 732 aa21.03■□□□□ 0.96
AGRN-208ENST00000479707 XRCC6P12956 609 aaKnown RBP eCLIP21.03■□□□□ 0.96
AGRN-208ENST00000479707 PBX2P40425 430 aa21.03■□□□□ 0.96
AGRN-208ENST00000479707 GPC3P51654 580 aa21.03■□□□□ 0.96
AGRN-208ENST00000479707 SMAD3P84022 425 aaKnown RBP21.03■□□□□ 0.96
AGRN-208ENST00000479707 PAK2Q13177 524 aa21.03■□□□□ 0.96
AGRN-208ENST00000479707 PTPAQ15257 358 aa21.03■□□□□ 0.96
AGRN-208ENST00000479707 MAEAQ7L5Y9 396 aa21.03■□□□□ 0.96
AGRN-208ENST00000479707 EXOC8Q8IYI6 725 aa21.03■□□□□ 0.96
AGRN-208ENST00000479707 APBB2Q92870 758 aa21.03■□□□□ 0.96
AGRN-208ENST00000479707 PLIN2Q99541 437 aa21.03■□□□□ 0.96
AGRN-208ENST00000479707 MTRQ99707 1265 aa21.03■□□□□ 0.96
AGRN-208ENST00000479707 MMTAG2Q9BU76 263 aaKnown RBP21.03■□□□□ 0.96
AGRN-208ENST00000479707 ADAMTS10Q9H324 1103 aa21.03■□□□□ 0.96
AGRN-208ENST00000479707 TFIP11Q9UBB9 837 aaKnown RBP21.03■□□□□ 0.96
AGRN-208ENST00000479707 DAXXQ9UER7 740 aaPredicted RBP21.03■□□□□ 0.96
AGRN-208ENST00000479707 PADI3Q9ULW8 664 aa21.03■□□□□ 0.96
AGRN-208ENST00000479707 PTPRSQ13332 1948 aa21.03■□□□□ 0.96
AGRN-208ENST00000479707 USO1O60763 962 aaKnown RBP21.02■□□□□ 0.96
AGRN-208ENST00000479707 PDIA4P13667 645 aaKnown RBP21.02■□□□□ 0.96
AGRN-208ENST00000479707 FAM117BQ6P1L5 589 aa21.02■□□□□ 0.96
AGRN-208ENST00000479707 USP38Q8NB14 1042 aa21.02■□□□□ 0.96
AGRN-208ENST00000479707 XPNPEP1Q9NQW7 623 aa21.02■□□□□ 0.96
AGRN-208ENST00000479707 DBR1Q9UK59 544 aaKnown RBP21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms