RNA–Protein interactions for RNA: ENST00000428693.1

TTC3-208, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-208ENST00000428693 CLP1Q92989 425 aaKnown RBP13.57□□□□□ -0.24
TTC3-208ENST00000428693 PABPC5Q96DU9 382 aaKnown RBP13.57□□□□□ -0.24
TTC3-208ENST00000428693 ZNF274Q96GC6 653 aaPredicted RBP13.57□□□□□ -0.24
TTC3-208ENST00000428693 AIFM3Q96NN9 605 aa13.57□□□□□ -0.24
TTC3-208ENST00000428693 PLVAPQ9BX97 442 aa13.57□□□□□ -0.24
TTC3-208ENST00000428693 C22orf23Q9BZE7 217 aa13.57□□□□□ -0.24
TTC3-208ENST00000428693 LMAN2LQ9H0V9 348 aa13.57□□□□□ -0.24
TTC3-208ENST00000428693 SLKQ9H2G2 1235 aaPredicted RBP13.57□□□□□ -0.24
TTC3-208ENST00000428693 UNC45AQ9H3U1 944 aa13.57□□□□□ -0.24
TTC3-208ENST00000428693 RC3H2Q9HBD1 1191 aaKnown RBP13.57□□□□□ -0.24
TTC3-208ENST00000428693 ERVK-5Q9HDB9 667 aa13.57□□□□□ -0.24
TTC3-208ENST00000428693 KDM3AQ9Y4C1 1321 aa13.57□□□□□ -0.24
TTC3-208ENST00000428693 MAGEB2O15479 319 aa13.56□□□□□ -0.24
TTC3-208ENST00000428693 MARCH6O60337 910 aa13.56□□□□□ -0.24
TTC3-208ENST00000428693 TDP2O95551 362 aa13.56□□□□□ -0.24
TTC3-208ENST00000428693 ZSCAN20P17040 1043 aaPredicted RBP13.56□□□□□ -0.24
TTC3-208ENST00000428693 GTF2F1P35269 517 aaKnown RBP eCLIP13.56□□□□□ -0.24
TTC3-208ENST00000428693 JAK3P52333 1124 aa13.56□□□□□ -0.24
TTC3-208ENST00000428693 TBC1D8BQ0IIM8 1120 aa13.56□□□□□ -0.24
TTC3-208ENST00000428693 UGCGQ16739 394 aa13.56□□□□□ -0.24
TTC3-208ENST00000428693 PUS10Q3MIT2 529 aaKnown RBP13.56□□□□□ -0.24
TTC3-208ENST00000428693 FAM102BQ5T8I3 360 aa13.56□□□□□ -0.24
TTC3-208ENST00000428693 SLC24A5Q71RS6 500 aa13.56□□□□□ -0.24
TTC3-208ENST00000428693 RBM23Q86U06 439 aaKnown RBP13.56□□□□□ -0.24
TTC3-208ENST00000428693 GJD3Q8N144 294 aa13.56□□□□□ -0.24
TTC3-208ENST00000428693 NLRP7Q8WX94 980 aa13.56□□□□□ -0.24
TTC3-208ENST00000428693 PPP2R3CQ969Q6 453 aa13.56□□□□□ -0.24
TTC3-208ENST00000428693 LENG9Q96B70 501 aa13.56□□□□□ -0.24
TTC3-208ENST00000428693 ATP6V0A4Q9HBG4 840 aa13.56□□□□□ -0.24
TTC3-208ENST00000428693 C1orf112Q9NSG2 853 aa13.56□□□□□ -0.24
TTC3-208ENST00000428693 FOXD4L1Q9NU39 408 aa13.56□□□□□ -0.24
TTC3-208ENST00000428693 SEPT9Q9UHD8 586 aaPredicted RBP13.56□□□□□ -0.24
TTC3-208ENST00000428693 KCNJ14Q9UNX9 436 aa13.56□□□□□ -0.24
TTC3-208ENST00000428693 PLAGL2Q9UPG8 496 aa13.56□□□□□ -0.24
TTC3-208ENST00000428693 FAM50BQ9Y247 325 aa13.56□□□□□ -0.24
TTC3-208ENST00000428693 PCDHB12Q9Y5F1 795 aa13.56□□□□□ -0.24
TTC3-208ENST00000428693 FAM86C2PA6NEL3 165 aa13.55□□□□□ -0.24
TTC3-208ENST00000428693 GRXCR2A6NFK2 248 aa13.55□□□□□ -0.24
TTC3-208ENST00000428693 NCK2O43639 380 aa13.55□□□□□ -0.24
TTC3-208ENST00000428693 CDKL5O76039 1030 aa13.55□□□□□ -0.24
TTC3-208ENST00000428693 ITGB1P05556 798 aa13.55□□□□□ -0.24
TTC3-208ENST00000428693 LINC00271P0C7V0 271 aa13.55□□□□□ -0.24
TTC3-208ENST00000428693 FGFR1P11362 822 aa13.55□□□□□ -0.24
TTC3-208ENST00000428693 SFNP31947 248 aa13.55□□□□□ -0.24
TTC3-208ENST00000428693 NDUFV1P49821 464 aa13.55□□□□□ -0.24
TTC3-208ENST00000428693 EVCP57679 992 aa13.55□□□□□ -0.24
TTC3-208ENST00000428693 HYAL1Q12794 435 aa13.55□□□□□ -0.24
TTC3-208ENST00000428693 NONOQ15233 471 aaKnown RBP eCLIP13.55□□□□□ -0.24
TTC3-208ENST00000428693 INF2Q27J81 1249 aa13.55□□□□□ -0.24
TTC3-208ENST00000428693 LETM2Q2VYF4 491 aa13.55□□□□□ -0.24
TTC3-208ENST00000428693 MTERF2Q49AM1 385 aa13.55□□□□□ -0.24
TTC3-208ENST00000428693 FAM228AQ86W67 206 aa13.55□□□□□ -0.24
TTC3-208ENST00000428693 FAM178BQ8IXR5 827 aa13.55□□□□□ -0.24
TTC3-208ENST00000428693 THNSL1Q8IYQ7 743 aa13.55□□□□□ -0.24
TTC3-208ENST00000428693 POF1BQ8WVV4 589 aa13.55□□□□□ -0.24
TTC3-208ENST00000428693 RIT2Q99578 217 aa13.55□□□□□ -0.24
TTC3-208ENST00000428693 SH2D3AQ9BRG2 576 aa13.55□□□□□ -0.24
TTC3-208ENST00000428693 TM6SF1Q9BZW5 370 aa13.55□□□□□ -0.24
TTC3-208ENST00000428693 AAASQ9NRG9 546 aa13.55□□□□□ -0.24
TTC3-208ENST00000428693 RGS18Q9NS28 235 aa13.55□□□□□ -0.24
TTC3-208ENST00000428693 DDX25Q9UHL0 483 aaKnown RBP13.55□□□□□ -0.24
TTC3-208ENST00000428693 COL4A6Q14031 1691 aa13.55□□□□□ -0.24
TTC3-208ENST00000428693 CCDC194A0A1B0GVG4 234 aa13.54□□□□□ -0.24
TTC3-208ENST00000428693 DDX11L8A8MPP1 907 aa13.54□□□□□ -0.24
TTC3-208ENST00000428693 ZNF862O60290 1169 aa13.54□□□□□ -0.24
TTC3-208ENST00000428693 GPR32O75388 356 aa13.54□□□□□ -0.24
TTC3-208ENST00000428693 MMP1P03956 469 aa13.54□□□□□ -0.24
TTC3-208ENST00000428693 XBP1P17861 261 aa13.54□□□□□ -0.24
TTC3-208ENST00000428693 FGFR4P22455 802 aa13.54□□□□□ -0.24
TTC3-208ENST00000428693 DNAJB1P25685 340 aa13.54□□□□□ -0.24
TTC3-208ENST00000428693 ABI1Q8IZP0 508 aa13.54□□□□□ -0.24
TTC3-208ENST00000428693 SPPL3Q8TCT6 385 aa13.54□□□□□ -0.24
TTC3-208ENST00000428693 NEK9Q8TD19 979 aa13.54□□□□□ -0.24
TTC3-208ENST00000428693 SLC5A5Q92911 643 aa13.54□□□□□ -0.24
TTC3-208ENST00000428693 KHSRPQ92945 711 aaKnown RBP eCLIP13.54□□□□□ -0.24
TTC3-208ENST00000428693 P2RX5Q93086 422 aa13.54□□□□□ -0.24
TTC3-208ENST00000428693 CD320Q9NPF0 282 aa13.54□□□□□ -0.24
TTC3-208ENST00000428693 TMEM150BA6NC51 233 aa13.53□□□□□ -0.24
TTC3-208ENST00000428693 LINC01565O15544 149 aa13.53□□□□□ -0.24
TTC3-208ENST00000428693 EPB41L2O43491 1005 aaKnown RBP13.53□□□□□ -0.24
TTC3-208ENST00000428693 CSDE1O75534 798 aaKnown RBP13.53□□□□□ -0.24
TTC3-208ENST00000428693 IRS1P35568 1242 aa13.53□□□□□ -0.24
TTC3-208ENST00000428693 NRIP1P48552 1158 aa13.53□□□□□ -0.24
TTC3-208ENST00000428693 DNM2P50570 870 aa13.53□□□□□ -0.24
TTC3-208ENST00000428693 DLX2Q07687 328 aaPredicted RBP13.53□□□□□ -0.24
TTC3-208ENST00000428693 SCRN1Q12765 414 aa13.53□□□□□ -0.24
TTC3-208ENST00000428693 Q4G0T1 1027 aa13.53□□□□□ -0.24
TTC3-208ENST00000428693 NAALADL2Q58DX5 795 aa13.53□□□□□ -0.24
TTC3-208ENST00000428693 TMEM31Q5JXX7 168 aa13.53□□□□□ -0.24
TTC3-208ENST00000428693 KRT25Q7Z3Z0 450 aa13.53□□□□□ -0.24
TTC3-208ENST00000428693 TYW1Q9NV66 732 aaKnown RBP13.53□□□□□ -0.24
TTC3-208ENST00000428693 HCSTQ9UBK5 93 aa13.53□□□□□ -0.24
TTC3-208ENST00000428693 PCDHGC5Q9Y5F6 944 aa13.53□□□□□ -0.24
TTC3-208ENST00000428693 KIAA1671Q9BY89 1806 aa13.53□□□□□ -0.24
TTC3-208ENST00000428693 C9IYK1 514 aa13.52□□□□□ -0.25
TTC3-208ENST00000428693 EDIL3O43854 480 aa13.52□□□□□ -0.25
TTC3-208ENST00000428693 CCNT1O60563 726 aaKnown RBP13.52□□□□□ -0.25
TTC3-208ENST00000428693 PSMD10O75832 226 aa13.52□□□□□ -0.25
TTC3-208ENST00000428693 EIF4BP23588 611 aaKnown RBP13.52□□□□□ -0.25
TTC3-208ENST00000428693 CA8P35219 290 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms