RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 ATP23Q9Y6H3 246 aa6.25□□□□□ -1.41
CLK1-203ENST00000409769 SAMD9Q5K651 1589 aa6.25□□□□□ -1.41
CLK1-203ENST00000409769 SHROOM2Q13796 1616 aa6.25□□□□□ -1.41
CLK1-203ENST00000409769 CLASP1Q7Z460 1538 aa6.25□□□□□ -1.41
CLK1-203ENST00000409769 UGGT2Q9NYU1 1516 aa6.25□□□□□ -1.41
CLK1-203ENST00000409769 ARHGAP35Q9NRY4 1499 aa6.24□□□□□ -1.41
CLK1-203ENST00000409769 CDC45O75419 566 aa6.24□□□□□ -1.41
CLK1-203ENST00000409769 RASGRP1O95267 797 aa6.24□□□□□ -1.41
CLK1-203ENST00000409769 ASLP04424 464 aa6.24□□□□□ -1.41
CLK1-203ENST00000409769 PTGS1P23219 599 aa6.24□□□□□ -1.41
CLK1-203ENST00000409769 RPS19P39019 145 aaKnown RBP6.24□□□□□ -1.41
CLK1-203ENST00000409769 HERVK_113P62684 666 aa6.24□□□□□ -1.41
CLK1-203ENST00000409769 NFYCQ13952 458 aa6.24□□□□□ -1.41
CLK1-203ENST00000409769 WDR72Q3MJ13 1102 aa6.24□□□□□ -1.41
CLK1-203ENST00000409769 PLEKHG4Q58EX7 1191 aa6.24□□□□□ -1.41
CLK1-203ENST00000409769 ARHGAP36Q6ZRI8 547 aa6.24□□□□□ -1.41
CLK1-203ENST00000409769 FGD2Q7Z6J4 655 aa6.24□□□□□ -1.41
CLK1-203ENST00000409769 ZC3H7AQ8IWR0 971 aaKnown RBP6.24□□□□□ -1.41
CLK1-203ENST00000409769 FEZ1Q99689 392 aa6.24□□□□□ -1.41
CLK1-203ENST00000409769 MENTQ9BUN1 341 aa6.24□□□□□ -1.41
CLK1-203ENST00000409769 ZDHHC5Q9C0B5 715 aa6.24□□□□□ -1.41
CLK1-203ENST00000409769 EFCAB5A4FU69 1503 aa6.24□□□□□ -1.41
CLK1-203ENST00000409769 TCRBV5S4A2TA0A5A2 114 aa6.23□□□□□ -1.41
CLK1-203ENST00000409769 CCDC66A2RUB6 948 aa6.23□□□□□ -1.41
CLK1-203ENST00000409769 ZNF561-AS1K7EIQ3 104 aa6.23□□□□□ -1.41
CLK1-203ENST00000409769 DNAJC8O75937 253 aaPredicted RBP6.23□□□□□ -1.41
CLK1-203ENST00000409769 AMY2AP04746 511 aa6.23□□□□□ -1.41
CLK1-203ENST00000409769 AMY2BP19961 511 aa6.23□□□□□ -1.41
CLK1-203ENST00000409769 PABPC4Q13310 644 aaKnown RBP eCLIP6.23□□□□□ -1.41
CLK1-203ENST00000409769 CRY1Q16526 586 aa6.23□□□□□ -1.41
CLK1-203ENST00000409769 GIMAP6Q6P9H5 292 aa6.23□□□□□ -1.41
CLK1-203ENST00000409769 FUKQ8N0W3 1084 aa6.23□□□□□ -1.41
CLK1-203ENST00000409769 NINJ1Q92982 152 aa6.23□□□□□ -1.41
CLK1-203ENST00000409769 ORAI3Q9BRQ5 295 aa6.23□□□□□ -1.41
CLK1-203ENST00000409769 GALNT8Q9NY28 637 aa6.23□□□□□ -1.41
CLK1-203ENST00000409769 MAGEC2Q9UBF1 373 aaPredicted RBP6.23□□□□□ -1.41
CLK1-203ENST00000409769 CBLCQ9ULV8 474 aa6.23□□□□□ -1.41
CLK1-203ENST00000409769 TMA7Q9Y2S6 64 aaKnown RBP6.23□□□□□ -1.41
CLK1-203ENST00000409769 NR2E1Q9Y466 385 aa6.23□□□□□ -1.41
CLK1-203ENST00000409769 CLIP1P30622 1438 aa6.23□□□□□ -1.41
CLK1-203ENST00000409769 HMGCRP04035 888 aa6.22□□□□□ -1.41
CLK1-203ENST00000409769 PYGMP11217 842 aa6.22□□□□□ -1.41
CLK1-203ENST00000409769 IGFALSP35858 605 aa6.22□□□□□ -1.41
CLK1-203ENST00000409769 ST5P78524 1137 aa6.22□□□□□ -1.41
CLK1-203ENST00000409769 RNF151Q2KHN1 245 aa6.22□□□□□ -1.41
CLK1-203ENST00000409769 NRN1LQ496H8 165 aa6.22□□□□□ -1.41
CLK1-203ENST00000409769 AGBL4Q5VU57 503 aa6.22□□□□□ -1.41
CLK1-203ENST00000409769 ZNF503Q96F45 646 aa6.22□□□□□ -1.41
CLK1-203ENST00000409769 INCENPQ9NQS7 918 aa6.22□□□□□ -1.41
CLK1-203ENST00000409769 CATSPERZQ9NTU4 200 aa6.22□□□□□ -1.41
CLK1-203ENST00000409769 PLAAQ9Y263 795 aa6.22□□□□□ -1.41
CLK1-203ENST00000409769 ARAP1Q96P48 1450 aa6.22□□□□□ -1.41
CLK1-203ENST00000409769 KIAA0556O60303 1618 aa6.21□□□□□ -1.41
CLK1-203ENST00000409769 DISP1Q96F81 1524 aa6.21□□□□□ -1.42
CLK1-203ENST00000409769 FAM90A27PA6NNH2 459 aa6.21□□□□□ -1.42
CLK1-203ENST00000409769 ARHGAP6O43182 974 aa6.21□□□□□ -1.42
CLK1-203ENST00000409769 CDC14BO60729 498 aa6.21□□□□□ -1.42
CLK1-203ENST00000409769 CLASP2O75122 1294 aaKnown RBP6.21□□□□□ -1.42
CLK1-203ENST00000409769 SRGAP2CP0DJJ0 459 aa6.21□□□□□ -1.42
CLK1-203ENST00000409769 PDE6AP16499 860 aa6.21□□□□□ -1.42
CLK1-203ENST00000409769 POU3F2P20265 443 aaPredicted RBP6.21□□□□□ -1.42
CLK1-203ENST00000409769 HSD3B2P26439 372 aa6.21□□□□□ -1.42
CLK1-203ENST00000409769 TGFB2P61812 414 aa6.21□□□□□ -1.42
CLK1-203ENST00000409769 ABHD18Q0P651 414 aa6.21□□□□□ -1.42
CLK1-203ENST00000409769 STILQ15468 1287 aa6.21□□□□□ -1.42
CLK1-203ENST00000409769 TKFCQ3LXA3 575 aa6.21□□□□□ -1.42
CLK1-203ENST00000409769 USP39Q53GS9 565 aaKnown RBP6.21□□□□□ -1.42
CLK1-203ENST00000409769 KRTAP5-3Q6L8H2 238 aa6.21□□□□□ -1.42
CLK1-203ENST00000409769 ZCCHC8Q6NZY4 707 aaKnown RBP6.21□□□□□ -1.42
CLK1-203ENST00000409769 ABHD17CQ6PCB6 329 aa6.21□□□□□ -1.42
CLK1-203ENST00000409769 OVCH1Q7RTY7 1134 aa6.21□□□□□ -1.42
CLK1-203ENST00000409769 WDR48Q8TAF3 677 aa6.21□□□□□ -1.42
CLK1-203ENST00000409769 WNK4Q96J92 1243 aa6.21□□□□□ -1.42
CLK1-203ENST00000409769 BTBD2Q9BX70 525 aa6.21□□□□□ -1.42
CLK1-203ENST00000409769 SMURF1Q9HCE7 757 aa6.21□□□□□ -1.42
CLK1-203ENST00000409769 PUF60Q9UHX1 559 aaKnown RBP6.21□□□□□ -1.42
CLK1-203ENST00000409769 PTPN22Q9Y2R2 807 aa6.21□□□□□ -1.42
CLK1-203ENST00000409769 CD2APQ9Y5K6 639 aa6.21□□□□□ -1.42
CLK1-203ENST00000409769 OVOL3O00110 214 aa6.2□□□□□ -1.42
CLK1-203ENST00000409769 MAN2B1O00754 1011 aa6.2□□□□□ -1.42
CLK1-203ENST00000409769 SDSP20132 328 aa6.2□□□□□ -1.42
CLK1-203ENST00000409769 ACO1P21399 889 aaKnown RBP6.2□□□□□ -1.42
CLK1-203ENST00000409769 AOAHP28039 575 aa6.2□□□□□ -1.42
CLK1-203ENST00000409769 MECP2P51608 486 aaKnown RBP6.2□□□□□ -1.42
CLK1-203ENST00000409769 EIF4HQ15056 248 aaKnown RBP6.2□□□□□ -1.42
CLK1-203ENST00000409769 SDE2Q6IQ49 451 aa6.2□□□□□ -1.42
CLK1-203ENST00000409769 MAMDC4Q6UXC1 1216 aa6.2□□□□□ -1.42
CLK1-203ENST00000409769 USP30Q70CQ3 517 aa6.2□□□□□ -1.42
CLK1-203ENST00000409769 OTOP1Q7RTM1 612 aa6.2□□□□□ -1.42
CLK1-203ENST00000409769 DDX53Q86TM3 631 aaKnown RBP6.2□□□□□ -1.42
CLK1-203ENST00000409769 OSTM1Q86WC4 334 aa6.2□□□□□ -1.42
CLK1-203ENST00000409769 AMER2Q8N7J2 671 aa6.2□□□□□ -1.42
CLK1-203ENST00000409769 AURKAIP1Q9NWT8 199 aaPredicted RBP6.2□□□□□ -1.42
CLK1-203ENST00000409769 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.19□□□□□ -1.42
CLK1-203ENST00000409769 NPIPB8E9PQR5 432 aa6.19□□□□□ -1.42
CLK1-203ENST00000409769 MCM7P33993 719 aa6.19□□□□□ -1.42
CLK1-203ENST00000409769 RRADP55042 308 aa6.19□□□□□ -1.42
CLK1-203ENST00000409769 JAM2P57087 298 aa6.19□□□□□ -1.42
CLK1-203ENST00000409769 IL13RA1P78552 427 aa6.19□□□□□ -1.42
CLK1-203ENST00000409769 PTH1RQ03431 593 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms