RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 SKAP1Q86WV1 359 aa15.66■□□□□ 0.1
CXCL12-202ENST00000374426 CKAP2LQ8IYA6 745 aa15.66■□□□□ 0.1
CXCL12-202ENST00000374426 VN1R2Q8NFZ6 395 aa15.66■□□□□ 0.1
CXCL12-202ENST00000374426 MICAL1Q8TDZ2 1067 aa15.66■□□□□ 0.1
CXCL12-202ENST00000374426 MFSD14AQ96MC6 490 aa15.66■□□□□ 0.1
CXCL12-202ENST00000374426 TLR9Q9NR96 1032 aa15.66■□□□□ 0.1
CXCL12-202ENST00000374426 AAASQ9NRG9 546 aa15.66■□□□□ 0.1
CXCL12-202ENST00000374426 TYW1Q9NV66 732 aaKnown RBP15.66■□□□□ 0.1
CXCL12-202ENST00000374426 MAFBQ9Y5Q3 323 aaPredicted RBP15.66■□□□□ 0.1
CXCL12-202ENST00000374426 USP34Q70CQ2 3546 aa15.65■□□□□ 0.1
CXCL12-202ENST00000374426 ESYT2A0FGR8 921 aa15.65■□□□□ 0.1
CXCL12-202ENST00000374426 DSC3Q14574 896 aa15.65■□□□□ 0.1
CXCL12-202ENST00000374426 ZNF746Q6NUN9 644 aaPredicted RBP15.65■□□□□ 0.1
CXCL12-202ENST00000374426 TRMT1LQ7Z2T5 733 aaKnown RBP15.65■□□□□ 0.1
CXCL12-202ENST00000374426 COLGALT1Q8NBJ5 622 aa15.65■□□□□ 0.1
CXCL12-202ENST00000374426 BBXQ8WY36 941 aaPredicted RBP15.65■□□□□ 0.1
CXCL12-202ENST00000374426 ZNF577Q9BSK1 485 aa15.65■□□□□ 0.1
CXCL12-202ENST00000374426 ZMYND12Q9H0C1 365 aa15.65■□□□□ 0.1
CXCL12-202ENST00000374426 CWH43Q9H720 699 aa15.65■□□□□ 0.1
CXCL12-202ENST00000374426 TBC1D22BQ9NU19 505 aa15.65■□□□□ 0.1
CXCL12-202ENST00000374426 RNF216Q9NWF9 866 aaPredicted RBP15.65■□□□□ 0.1
CXCL12-202ENST00000374426 TMEM161AQ9NX61 479 aa15.65■□□□□ 0.1
CXCL12-202ENST00000374426 FSCN2O14926 492 aa15.64■□□□□ 0.09
CXCL12-202ENST00000374426 SETQ01105 290 aaPredicted RBP15.64■□□□□ 0.09
CXCL12-202ENST00000374426 DUSP6Q16828 381 aa15.64■□□□□ 0.09
CXCL12-202ENST00000374426 TRIM67Q6ZTA4 783 aa15.64■□□□□ 0.09
CXCL12-202ENST00000374426 BMP8AQ7Z5Y6 402 aa15.64■□□□□ 0.09
CXCL12-202ENST00000374426 SMAP1Q8IYB5 467 aaPredicted RBP15.64■□□□□ 0.09
CXCL12-202ENST00000374426 THNSL1Q8IYQ7 743 aa15.64■□□□□ 0.09
CXCL12-202ENST00000374426 METTL13Q8N6R0 699 aa15.64■□□□□ 0.09
CXCL12-202ENST00000374426 SUSD6Q92537 303 aa15.64■□□□□ 0.09
CXCL12-202ENST00000374426 ELAC1Q9H777 363 aaKnown RBP15.64■□□□□ 0.09
CXCL12-202ENST00000374426 ATP6V0A4Q9HBG4 840 aa15.64■□□□□ 0.09
CXCL12-202ENST00000374426 NAP1L2Q9ULW6 460 aaPredicted RBP15.64■□□□□ 0.09
CXCL12-202ENST00000374426 CPA1P15085 419 aa15.63■□□□□ 0.09
CXCL12-202ENST00000374426 METAP2P50579 478 aaKnown RBP eCLIP15.63■□□□□ 0.09
CXCL12-202ENST00000374426 CLCN3P51790 818 aa15.63■□□□□ 0.09
CXCL12-202ENST00000374426 KCNC3Q14003 757 aa15.63■□□□□ 0.09
CXCL12-202ENST00000374426 KRT32Q14532 448 aa15.63■□□□□ 0.09
CXCL12-202ENST00000374426 PKN1Q16512 942 aa15.63■□□□□ 0.09
CXCL12-202ENST00000374426 PRR16Q569H4 304 aa15.63■□□□□ 0.09
CXCL12-202ENST00000374426 REXO1Q8N1G1 1221 aaKnown RBP15.63■□□□□ 0.09
CXCL12-202ENST00000374426 LINC01465Q8N7H1 131 aa15.63■□□□□ 0.09
CXCL12-202ENST00000374426 CDCA3Q99618 268 aaPredicted RBP15.63■□□□□ 0.09
CXCL12-202ENST00000374426 PHF7Q9BWX1 381 aaPredicted RBP15.63■□□□□ 0.09
CXCL12-202ENST00000374426 RNF19AQ9NV58 838 aa15.63■□□□□ 0.09
CXCL12-202ENST00000374426 GABBR1Q9UBS5 961 aa15.63■□□□□ 0.09
CXCL12-202ENST00000374426 PCDHA10Q9Y5I2 948 aa15.63■□□□□ 0.09
CXCL12-202ENST00000374426 MYH9P35579 1960 aaKnown RBP15.62■□□□□ 0.09
CXCL12-202ENST00000374426 FSD2A1L4K1 749 aa15.62■□□□□ 0.09
CXCL12-202ENST00000374426 TMEM221A6NGB7 291 aa15.62■□□□□ 0.09
CXCL12-202ENST00000374426 M0R296 226 aa15.62■□□□□ 0.09
CXCL12-202ENST00000374426 PSAPP07602 524 aa15.62■□□□□ 0.09
CXCL12-202ENST00000374426 HMGB1P09429 215 aaKnown RBP15.62■□□□□ 0.09
CXCL12-202ENST00000374426 ATF7P17544 494 aaPredicted RBP15.62■□□□□ 0.09
CXCL12-202ENST00000374426 LAG3P18627 525 aa15.62■□□□□ 0.09
CXCL12-202ENST00000374426 NLRP11P59045 1033 aaKnown RBP15.62■□□□□ 0.09
CXCL12-202ENST00000374426 ZXDAP98168 799 aa15.62■□□□□ 0.09
CXCL12-202ENST00000374426 PLCB3Q01970 1234 aa15.62■□□□□ 0.09
CXCL12-202ENST00000374426 APOBRQ0VD83 1088 aa15.62■□□□□ 0.09
CXCL12-202ENST00000374426 MCTP2Q6DN12 878 aa15.62■□□□□ 0.09
CXCL12-202ENST00000374426 PDE12Q6L8Q7 609 aaKnown RBP15.62■□□□□ 0.09
CXCL12-202ENST00000374426 LRRC55Q6ZSA7 311 aa15.62■□□□□ 0.09
CXCL12-202ENST00000374426 LENG9Q96B70 501 aa15.62■□□□□ 0.09
CXCL12-202ENST00000374426 RPGRIP1Q96KN7 1286 aa15.62■□□□□ 0.09
CXCL12-202ENST00000374426 CASD1Q96PB1 797 aa15.62■□□□□ 0.09
CXCL12-202ENST00000374426 TMEM117Q9H0C3 514 aa15.62■□□□□ 0.09
CXCL12-202ENST00000374426 ADAMTS10Q9H324 1103 aa15.62■□□□□ 0.09
CXCL12-202ENST00000374426 C6orf50Q9HD87 102 aa15.62■□□□□ 0.09
CXCL12-202ENST00000374426 CEP131Q9UPN4 1083 aa15.62■□□□□ 0.09
CXCL12-202ENST00000374426 LZTS1Q9Y250 596 aa15.62■□□□□ 0.09
CXCL12-202ENST00000374426 CCDC196A0A1B0GTZ2 297 aa15.61■□□□□ 0.09
CXCL12-202ENST00000374426 MAGEB2O15479 319 aa15.61■□□□□ 0.09
CXCL12-202ENST00000374426 ZNF862O60290 1169 aa15.61■□□□□ 0.09
CXCL12-202ENST00000374426 CIITAP33076 1130 aa15.61■□□□□ 0.09
CXCL12-202ENST00000374426 PBX3P40426 434 aa15.61■□□□□ 0.09
CXCL12-202ENST00000374426 FGD1P98174 961 aa15.61■□□□□ 0.09
CXCL12-202ENST00000374426 IER5LQ5T953 404 aa15.61■□□□□ 0.09
CXCL12-202ENST00000374426 PLPP4Q5VZY2 271 aa15.61■□□□□ 0.09
CXCL12-202ENST00000374426 EFCAB12Q6NXP0 572 aa15.61■□□□□ 0.09
CXCL12-202ENST00000374426 TMEM184AQ6ZMB5 413 aa15.61■□□□□ 0.09
CXCL12-202ENST00000374426 LRRC71Q8N4P6 559 aa15.61■□□□□ 0.09
CXCL12-202ENST00000374426 RASGRP4Q8TDF6 673 aa15.61■□□□□ 0.09
CXCL12-202ENST00000374426 CCDC12Q8WUD4 166 aaPredicted RBP15.61■□□□□ 0.09
CXCL12-202ENST00000374426 MRPS27Q92552 414 aaKnown RBP15.61■□□□□ 0.09
CXCL12-202ENST00000374426 PBXIP1Q96AQ6 731 aa15.61■□□□□ 0.09
CXCL12-202ENST00000374426 TCF25Q9BQ70 676 aa15.61■□□□□ 0.09
CXCL12-202ENST00000374426 S1PR5Q9H228 398 aa15.61■□□□□ 0.09
CXCL12-202ENST00000374426 TCEAL9Q9UHQ7 104 aa15.61■□□□□ 0.09
CXCL12-202ENST00000374426 AKT3Q9Y243 479 aa15.61■□□□□ 0.09
CXCL12-202ENST00000374426 SAMM50Q9Y512 469 aa15.61■□□□□ 0.09
CXCL12-202ENST00000374426 NID2Q14112 1375 aa15.61■□□□□ 0.09
CXCL12-202ENST00000374426 ZFHX2Q9C0A1 2572 aaPredicted RBP15.6■□□□□ 0.09
CXCL12-202ENST00000374426 HIDE1A8MVS5 230 aa15.6■□□□□ 0.09
CXCL12-202ENST00000374426 HOXA2O43364 376 aa15.6■□□□□ 0.09
CXCL12-202ENST00000374426 PRPF3O43395 683 aaKnown RBP15.6■□□□□ 0.09
CXCL12-202ENST00000374426 EDIL3O43854 480 aa15.6■□□□□ 0.09
CXCL12-202ENST00000374426 EIF4BP23588 611 aaKnown RBP15.6■□□□□ 0.09
CXCL12-202ENST00000374426 GNA11P29992 359 aa15.6■□□□□ 0.09
CXCL12-202ENST00000374426 SYCE2Q6PIF2 218 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms