RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 PPFIA1Q13136 1202 aa11.6□□□□□ -0.55
COL5A1-202ENST00000371820 IKBKEQ14164 716 aa11.6□□□□□ -0.55
COL5A1-202ENST00000371820 TPD52L1Q16890 204 aaPredicted RBP11.6□□□□□ -0.55
COL5A1-202ENST00000371820 TCTN1Q2MV58 587 aa11.6□□□□□ -0.55
COL5A1-202ENST00000371820 ZNF618Q5T7W0 954 aa11.6□□□□□ -0.55
COL5A1-202ENST00000371820 FAM160B1Q5W0V3 765 aa11.6□□□□□ -0.55
COL5A1-202ENST00000371820 TRAF7Q6Q0C0 670 aa11.6□□□□□ -0.55
COL5A1-202ENST00000371820 SMAP1Q8IYB5 467 aaPredicted RBP11.6□□□□□ -0.55
COL5A1-202ENST00000371820 SPC24Q8NBT2 197 aa11.6□□□□□ -0.55
COL5A1-202ENST00000371820 LINC00301Q8NCQ3 95 aa11.6□□□□□ -0.55
COL5A1-202ENST00000371820 CCDC150Q8NCX0 1101 aa11.6□□□□□ -0.55
COL5A1-202ENST00000371820 LMBR1Q8WVP7 490 aa11.6□□□□□ -0.55
COL5A1-202ENST00000371820 WNT8BQ93098 351 aa11.6□□□□□ -0.55
COL5A1-202ENST00000371820 ZNF830Q96NB3 372 aaPredicted RBP11.6□□□□□ -0.55
COL5A1-202ENST00000371820 DNAJC25Q9H1X3 360 aa11.6□□□□□ -0.55
COL5A1-202ENST00000371820 TBC1D22BQ9NU19 505 aa11.6□□□□□ -0.55
COL5A1-202ENST00000371820 SETD4Q9NVD3 440 aa11.6□□□□□ -0.55
COL5A1-202ENST00000371820 VPS54Q9P1Q0 977 aa11.6□□□□□ -0.55
COL5A1-202ENST00000371820 KIAA1468Q9P260 1216 aa11.6□□□□□ -0.55
COL5A1-202ENST00000371820 ORC3Q9UBD5 711 aaPredicted RBP11.6□□□□□ -0.55
COL5A1-202ENST00000371820 XIRP2A4UGR9 3374 aa11.59□□□□□ -0.55
COL5A1-202ENST00000371820 MYH15Q9Y2K3 1946 aa11.59□□□□□ -0.55
COL5A1-202ENST00000371820 LCHNA4D1U4 455 aa11.59□□□□□ -0.55
COL5A1-202ENST00000371820 IPO5O00410 1097 aaKnown RBP11.59□□□□□ -0.55
COL5A1-202ENST00000371820 IKBKBO14920 756 aa11.59□□□□□ -0.55
COL5A1-202ENST00000371820 LPXNO60711 386 aa11.59□□□□□ -0.55
COL5A1-202ENST00000371820 CTDNEP1O95476 244 aa11.59□□□□□ -0.55
COL5A1-202ENST00000371820 ARP10275 920 aa11.59□□□□□ -0.55
COL5A1-202ENST00000371820 BMP1P13497 986 aa11.59□□□□□ -0.55
COL5A1-202ENST00000371820 MARK3P27448 753 aa11.59□□□□□ -0.55
COL5A1-202ENST00000371820 STAT5BP51692 787 aa11.59□□□□□ -0.55
COL5A1-202ENST00000371820 NLRP12P59046 1061 aa11.59□□□□□ -0.55
COL5A1-202ENST00000371820 ACTR2P61160 394 aa11.59□□□□□ -0.55
COL5A1-202ENST00000371820 GRB10Q13322 594 aa11.59□□□□□ -0.55
COL5A1-202ENST00000371820 SNW1Q13573 536 aaKnown RBP11.59□□□□□ -0.55
COL5A1-202ENST00000371820 MBTPS1Q14703 1052 aa11.59□□□□□ -0.55
COL5A1-202ENST00000371820 SAFBQ15424 915 aaKnown RBP eCLIP11.59□□□□□ -0.55
COL5A1-202ENST00000371820 SKIV2LQ15477 1246 aaKnown RBP11.59□□□□□ -0.55
COL5A1-202ENST00000371820 GRIK4Q16099 956 aa11.59□□□□□ -0.55
COL5A1-202ENST00000371820 AAK1Q2M2I8 961 aa11.59□□□□□ -0.55
COL5A1-202ENST00000371820 KRT40Q6A162 431 aa11.59□□□□□ -0.55
COL5A1-202ENST00000371820 KANK3Q6NY19 840 aa11.59□□□□□ -0.55
COL5A1-202ENST00000371820 FAM173BQ6P4H8 233 aa11.59□□□□□ -0.55
COL5A1-202ENST00000371820 PLPPR4Q7Z2D5 763 aa11.59□□□□□ -0.55
COL5A1-202ENST00000371820 SPRED2Q7Z698 418 aa11.59□□□□□ -0.55
COL5A1-202ENST00000371820 TMCO2Q7Z6W1 182 aaPredicted RBP11.59□□□□□ -0.55
COL5A1-202ENST00000371820 RPAINQ86UA6 219 aa11.59□□□□□ -0.55
COL5A1-202ENST00000371820 LRRC8AQ8IWT6 810 aa11.59□□□□□ -0.55
COL5A1-202ENST00000371820 FMR1NBQ8N0W7 255 aaPredicted RBP11.59□□□□□ -0.55
COL5A1-202ENST00000371820 CYP2W1Q8TAV3 490 aa11.59□□□□□ -0.55
COL5A1-202ENST00000371820 CRYGNQ8WXF5 182 aa11.59□□□□□ -0.55
COL5A1-202ENST00000371820 USP28Q96RU2 1077 aa11.59□□□□□ -0.55
COL5A1-202ENST00000371820 ZNF577Q9BSK1 485 aa11.59□□□□□ -0.55
COL5A1-202ENST00000371820 DACH1Q9UI36 760 aa11.59□□□□□ -0.55
COL5A1-202ENST00000371820 TUBE1Q9UJT0 475 aa11.59□□□□□ -0.55
COL5A1-202ENST00000371820 PCDHA4Q9UN74 947 aa11.59□□□□□ -0.55
COL5A1-202ENST00000371820 TRPC6Q9Y210 931 aa11.59□□□□□ -0.55
COL5A1-202ENST00000371820 STK36Q9NRP7 1315 aa11.59□□□□□ -0.55
COL5A1-202ENST00000371820 IGLV3-22A0A075B6J6 115 aa11.58□□□□□ -0.56
COL5A1-202ENST00000371820 FAM86B1E9PN63 330 aa11.58□□□□□ -0.56
COL5A1-202ENST00000371820 ATG7O95352 703 aa11.58□□□□□ -0.56
COL5A1-202ENST00000371820 GJB5O95377 273 aa11.58□□□□□ -0.56
COL5A1-202ENST00000371820 FAM86B2P0C5J1 330 aa11.58□□□□□ -0.56
COL5A1-202ENST00000371820 TNNT1P13805 278 aa11.58□□□□□ -0.56
COL5A1-202ENST00000371820 CIITAP33076 1130 aa11.58□□□□□ -0.56
COL5A1-202ENST00000371820 USP11P51784 963 aa11.58□□□□□ -0.56
COL5A1-202ENST00000371820 KCNQ1P51787 676 aa11.58□□□□□ -0.56
COL5A1-202ENST00000371820 ADAM17P78536 824 aa11.58□□□□□ -0.56
COL5A1-202ENST00000371820 RBM10P98175 930 aaKnown RBP11.58□□□□□ -0.56
COL5A1-202ENST00000371820 KRT76Q01546 638 aa11.58□□□□□ -0.56
COL5A1-202ENST00000371820 GNL2Q13823 731 aaKnown RBP11.58□□□□□ -0.56
COL5A1-202ENST00000371820 HIC1Q14526 733 aa11.58□□□□□ -0.56
COL5A1-202ENST00000371820 SLC39A14Q15043 492 aa11.58□□□□□ -0.56
COL5A1-202ENST00000371820 PTPN14Q15678 1187 aa11.58□□□□□ -0.56
COL5A1-202ENST00000371820 TPRNQ4KMQ1 711 aa11.58□□□□□ -0.56
COL5A1-202ENST00000371820 ZNF746Q6NUN9 644 aaPredicted RBP11.58□□□□□ -0.56
COL5A1-202ENST00000371820 MIS18BP1Q6P0N0 1132 aa11.58□□□□□ -0.56
COL5A1-202ENST00000371820 BLIDQ8IZY5 108 aa11.58□□□□□ -0.56
COL5A1-202ENST00000371820 DAGLBQ8NCG7 672 aa11.58□□□□□ -0.56
COL5A1-202ENST00000371820 CCDC112Q8NEF3 446 aa11.58□□□□□ -0.56
COL5A1-202ENST00000371820 SEPT8Q92599 483 aa11.58□□□□□ -0.56
COL5A1-202ENST00000371820 APBB2Q92870 758 aa11.58□□□□□ -0.56
COL5A1-202ENST00000371820 NECAB3Q96P71 396 aaPredicted RBP11.58□□□□□ -0.56
COL5A1-202ENST00000371820 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.58□□□□□ -0.56
COL5A1-202ENST00000371820 CGNQ9P2M7 1197 aaKnown RBP11.58□□□□□ -0.56
COL5A1-202ENST00000371820 PCDHA7Q9UN72 937 aa11.58□□□□□ -0.56
COL5A1-202ENST00000371820 COG5Q9UP83 839 aa11.58□□□□□ -0.56
COL5A1-202ENST00000371820 CEP131Q9UPN4 1083 aa11.58□□□□□ -0.56
COL5A1-202ENST00000371820 SIP14410 1827 aa11.58□□□□□ -0.56
COL5A1-202ENST00000371820 TCF20Q9UGU0 1960 aaKnown RBP11.58□□□□□ -0.56
COL5A1-202ENST00000371820 FAM237AA0A1B0GTK4 181 aa11.57□□□□□ -0.56
COL5A1-202ENST00000371820 M0QZ92 97 aa11.57□□□□□ -0.56
COL5A1-202ENST00000371820 DDX39AO00148 427 aaKnown RBP11.57□□□□□ -0.56
COL5A1-202ENST00000371820 BACH1O14867 736 aa11.57□□□□□ -0.56
COL5A1-202ENST00000371820 CUTAO60888 179 aa11.57□□□□□ -0.56
COL5A1-202ENST00000371820 AMHP03971 560 aa11.57□□□□□ -0.56
COL5A1-202ENST00000371820 COL9A1P20849 921 aa11.57□□□□□ -0.56
COL5A1-202ENST00000371820 FAM193AP78312 1265 aa11.57□□□□□ -0.56
COL5A1-202ENST00000371820 ITGB3BPQ13352 177 aaPredicted RBP11.57□□□□□ -0.56
COL5A1-202ENST00000371820 MKRN4PQ13434 485 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms