RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 FAXDC2Q96IV6 333 aa7.38□□□□□ -1.23
RNU4-39P-201ENST00000362455 KIRREL1Q96J84 757 aa7.38□□□□□ -1.23
RNU4-39P-201ENST00000362455 SLC13A1Q9BZW2 595 aa7.38□□□□□ -1.23
RNU4-39P-201ENST00000362455 MSRAQ9UJ68 235 aa7.38□□□□□ -1.23
RNU4-39P-201ENST00000362455 ZNF180Q9UJW8 692 aa7.38□□□□□ -1.23
RNU4-39P-201ENST00000362455 CCNB3Q8WWL7 1395 aa7.37□□□□□ -1.23
RNU4-39P-201ENST00000362455 H2AFYO75367 372 aaKnown RBP7.37□□□□□ -1.23
RNU4-39P-201ENST00000362455 ABLIM3O94929 683 aa7.37□□□□□ -1.23
RNU4-39P-201ENST00000362455 CFBP00751 764 aa7.37□□□□□ -1.23
RNU4-39P-201ENST00000362455 RBP3P10745 1247 aa7.37□□□□□ -1.23
RNU4-39P-201ENST00000362455 FAHP16930 419 aa7.37□□□□□ -1.23
RNU4-39P-201ENST00000362455 CCND1P24385 295 aa7.37□□□□□ -1.23
RNU4-39P-201ENST00000362455 GPR3P46089 330 aa7.37□□□□□ -1.23
RNU4-39P-201ENST00000362455 HERVK_113P62684 666 aa7.37□□□□□ -1.23
RNU4-39P-201ENST00000362455 PLEKHN1Q494U1 663 aaPredicted RBP7.37□□□□□ -1.23
RNU4-39P-201ENST00000362455 ERCC4Q92889 916 aaPredicted RBP7.37□□□□□ -1.23
RNU4-39P-201ENST00000362455 ZNF496Q96IT1 587 aaPredicted RBP7.37□□□□□ -1.23
RNU4-39P-201ENST00000362455 C8orf48Q96LL4 319 aa7.37□□□□□ -1.23
RNU4-39P-201ENST00000362455 GBP4Q96PP9 640 aa7.37□□□□□ -1.23
RNU4-39P-201ENST00000362455 BCAS3Q9H6U6 928 aa7.37□□□□□ -1.23
RNU4-39P-201ENST00000362455 MKS1Q9NXB0 559 aa7.37□□□□□ -1.23
RNU4-39P-201ENST00000362455 LUC7L2Q9Y383 392 aaKnown RBP7.37□□□□□ -1.23
RNU4-39P-201ENST00000362455 ITSN2Q9NZM3 1697 aa7.37□□□□□ -1.23
RNU4-39P-201ENST00000362455 ATP7AQ04656 1500 aa7.37□□□□□ -1.23
RNU4-39P-201ENST00000362455 A2ML1A8K2U0 1454 aa7.36□□□□□ -1.23
RNU4-39P-201ENST00000362455 FYCO1Q9BQS8 1478 aa7.36□□□□□ -1.23
RNU4-39P-201ENST00000362455 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.36□□□□□ -1.23
RNU4-39P-201ENST00000362455 KIF3BO15066 747 aa7.36□□□□□ -1.23
RNU4-39P-201ENST00000362455 SNUPNO95149 360 aaKnown RBP7.36□□□□□ -1.23
RNU4-39P-201ENST00000362455 MAPKAPK2P49137 400 aa7.36□□□□□ -1.23
RNU4-39P-201ENST00000362455 GP2P55259 537 aaKnown RBP7.36□□□□□ -1.23
RNU4-39P-201ENST00000362455 ADCY1Q08828 1119 aa7.36□□□□□ -1.23
RNU4-39P-201ENST00000362455 NME9Q86XW9 330 aa7.36□□□□□ -1.23
RNU4-39P-201ENST00000362455 CAMKK2Q96RR4 588 aa7.36□□□□□ -1.23
RNU4-39P-201ENST00000362455 RHOBTB2Q9BYZ6 727 aa7.36□□□□□ -1.23
RNU4-39P-201ENST00000362455 SLC6A17Q9H1V8 727 aa7.36□□□□□ -1.23
RNU4-39P-201ENST00000362455 SEMA4AQ9H3S1 761 aa7.36□□□□□ -1.23
RNU4-39P-201ENST00000362455 LUC7LQ9NQ29 371 aaKnown RBP7.36□□□□□ -1.23
RNU4-39P-201ENST00000362455 DTLQ9NZJ0 730 aa7.36□□□□□ -1.23
RNU4-39P-201ENST00000362455 USP36Q9P275 1121 aaKnown RBP7.36□□□□□ -1.23
RNU4-39P-201ENST00000362455 KLHL14Q9P2G3 628 aa7.36□□□□□ -1.23
RNU4-39P-201ENST00000362455 IP6K2Q9UHH9 426 aa7.36□□□□□ -1.23
RNU4-39P-201ENST00000362455 ALKQ9UM73 1620 aa7.36□□□□□ -1.23
RNU4-39P-201ENST00000362455 CEP170BQ9Y4F5 1589 aaPredicted RBP7.36□□□□□ -1.23
RNU4-39P-201ENST00000362455 TNRQ92752 1358 aa7.35□□□□□ -1.23
RNU4-39P-201ENST00000362455 TRIM75PA6NK02 468 aa7.35□□□□□ -1.23
RNU4-39P-201ENST00000362455 TOM1O60784 492 aa7.35□□□□□ -1.23
RNU4-39P-201ENST00000362455 ZSCAN20P17040 1043 aaPredicted RBP7.35□□□□□ -1.23
RNU4-39P-201ENST00000362455 AOAHP28039 575 aa7.35□□□□□ -1.23
RNU4-39P-201ENST00000362455 PDE6BP35913 854 aa7.35□□□□□ -1.23
RNU4-39P-201ENST00000362455 NBPF11Q86T75 865 aa7.35□□□□□ -1.23
RNU4-39P-201ENST00000362455 RTN4RL1Q86UN2 441 aaPredicted RBP7.35□□□□□ -1.23
RNU4-39P-201ENST00000362455 PNMA8AQ86V59 439 aaPredicted RBP7.35□□□□□ -1.23
RNU4-39P-201ENST00000362455 CXorf67Q86X51 503 aaPredicted RBP7.35□□□□□ -1.23
RNU4-39P-201ENST00000362455 MIB1Q86YT6 1006 aa7.35□□□□□ -1.23
RNU4-39P-201ENST00000362455 CILP2Q8IUL8 1156 aa7.35□□□□□ -1.23
RNU4-39P-201ENST00000362455 FAM126BQ8IXS8 530 aa7.35□□□□□ -1.23
RNU4-39P-201ENST00000362455 AMOTL1Q8IY63 956 aa7.35□□□□□ -1.23
RNU4-39P-201ENST00000362455 MYO1HQ8N1T3 1032 aa7.35□□□□□ -1.23
RNU4-39P-201ENST00000362455 C7orf31Q8N865 590 aa7.35□□□□□ -1.23
RNU4-39P-201ENST00000362455 HIPK4Q8NE63 616 aa7.35□□□□□ -1.23
RNU4-39P-201ENST00000362455 TGFBRAP1Q8WUH2 860 aa7.35□□□□□ -1.23
RNU4-39P-201ENST00000362455 JPH3Q8WXH2 748 aaPredicted RBP7.35□□□□□ -1.23
RNU4-39P-201ENST00000362455 FOXRED1Q96CU9 486 aaPredicted RBP7.35□□□□□ -1.23
RNU4-39P-201ENST00000362455 CCDC136Q96JN2 1154 aa7.35□□□□□ -1.23
RNU4-39P-201ENST00000362455 ACAP3Q96P50 834 aa7.35□□□□□ -1.23
RNU4-39P-201ENST00000362455 CCM2LQ9NUG4 571 aaPredicted RBP7.35□□□□□ -1.23
RNU4-39P-201ENST00000362455 RGS17Q9UGC6 210 aaPredicted RBP7.35□□□□□ -1.23
RNU4-39P-201ENST00000362455 NOB1Q9ULX3 412 aaKnown RBP7.35□□□□□ -1.23
RNU4-39P-201ENST00000362455 ASB1Q9Y576 335 aa7.35□□□□□ -1.23
RNU4-39P-201ENST00000362455 PLEKHH2Q8IVE3 1493 aa7.35□□□□□ -1.23
RNU4-39P-201ENST00000362455 SHANK2Q9UPX8 1470 aa7.35□□□□□ -1.23
RNU4-39P-201ENST00000362455 RTEL1-TNFRSF6BF6WH68 1400 aa7.35□□□□□ -1.23
RNU4-39P-201ENST00000362455 MIA2Q96PC5 1412 aa7.35□□□□□ -1.23
RNU4-39P-201ENST00000362455 INO80Q9ULG1 1556 aaPredicted RBP7.34□□□□□ -1.23
RNU4-39P-201ENST00000362455 UBA6A0AVT1 1052 aaPredicted RBP7.34□□□□□ -1.23
RNU4-39P-201ENST00000362455 OR14I1A6ND48 311 aa7.34□□□□□ -1.23
RNU4-39P-201ENST00000362455 PCDHGA12O60330 932 aa7.34□□□□□ -1.23
RNU4-39P-201ENST00000362455 LRG1P02750 347 aa7.34□□□□□ -1.23
RNU4-39P-201ENST00000362455 KRT85P78386 507 aa7.34□□□□□ -1.23
RNU4-39P-201ENST00000362455 DBPQ10586 325 aaPredicted RBP7.34□□□□□ -1.23
RNU4-39P-201ENST00000362455 ZC3H14Q6PJT7 736 aaKnown RBP7.34□□□□□ -1.23
RNU4-39P-201ENST00000362455 PHYKPLQ8IUZ5 450 aa7.34□□□□□ -1.23
RNU4-39P-201ENST00000362455 TOE1Q96GM8 510 aaKnown RBP7.34□□□□□ -1.23
RNU4-39P-201ENST00000362455 POFUT1Q9H488 388 aa7.34□□□□□ -1.23
RNU4-39P-201ENST00000362455 BTBD7Q9P203 1132 aa7.34□□□□□ -1.23
RNU4-39P-201ENST00000362455 PCDHGA9Q9Y5G4 932 aaKnown RBP7.34□□□□□ -1.23
RNU4-39P-201ENST00000362455 PCDHGA8Q9Y5G5 932 aa7.34□□□□□ -1.23
RNU4-39P-201ENST00000362455 PCDHGA7Q9Y5G6 932 aa7.34□□□□□ -1.23
RNU4-39P-201ENST00000362455 PCDHGA6Q9Y5G7 932 aa7.34□□□□□ -1.23
RNU4-39P-201ENST00000362455 PCDHGA3Q9Y5H0 932 aa7.34□□□□□ -1.23
RNU4-39P-201ENST00000362455 PCDHGA2Q9Y5H1 932 aa7.34□□□□□ -1.23
RNU4-39P-201ENST00000362455 MTUS2Q5JR59 1369 aa7.33□□□□□ -1.24
RNU4-39P-201ENST00000362455 NEURL4Q96JN8 1562 aa7.33□□□□□ -1.24
RNU4-39P-201ENST00000362455 CDC42BPAQ5VT25 1732 aa7.33□□□□□ -1.24
RNU4-39P-201ENST00000362455 MROH2AA6NES4 1674 aa7.33□□□□□ -1.24
RNU4-39P-201ENST00000362455 PRAMEF22A3QJZ6 481 aa7.33□□□□□ -1.24
RNU4-39P-201ENST00000362455 GOLGA6L22H0YM25 854 aa7.33□□□□□ -1.24
RNU4-39P-201ENST00000362455 XPOTO43592 962 aaKnown RBP7.33□□□□□ -1.24
RNU4-39P-201ENST00000362455 RFPL1O75677 317 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms