RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 MRPS17Q9Y2R5 130 aaKnown RBP10.54□□□□□ -0.72
UBE2D3-205ENST00000350435 SDK1Q7Z5N4 2213 aa10.53□□□□□ -0.72
UBE2D3-205ENST00000350435 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.53□□□□□ -0.72
UBE2D3-205ENST00000350435 C4orf47A7E2U8 309 aa10.53□□□□□ -0.72
UBE2D3-205ENST00000350435 CHURC1-FNTBB4DL54 471 aa10.53□□□□□ -0.72
UBE2D3-205ENST00000350435 LGALS2P05162 132 aa10.53□□□□□ -0.72
UBE2D3-205ENST00000350435 LAMP2P13473 410 aa10.53□□□□□ -0.72
UBE2D3-205ENST00000350435 CSRP1P21291 193 aaKnown RBP10.53□□□□□ -0.72
UBE2D3-205ENST00000350435 PBX3P40426 434 aa10.53□□□□□ -0.72
UBE2D3-205ENST00000350435 FNTBP49356 437 aa10.53□□□□□ -0.72
UBE2D3-205ENST00000350435 ADAM17P78536 824 aa10.53□□□□□ -0.72
UBE2D3-205ENST00000350435 PFKPQ01813 784 aa10.53□□□□□ -0.72
UBE2D3-205ENST00000350435 ADCY1Q08828 1119 aa10.53□□□□□ -0.72
UBE2D3-205ENST00000350435 PAK2Q13177 524 aa10.53□□□□□ -0.72
UBE2D3-205ENST00000350435 TTF1Q15361 905 aaPredicted RBP10.53□□□□□ -0.72
UBE2D3-205ENST00000350435 CELF3Q5SZQ8 465 aaKnown RBP10.53□□□□□ -0.72
UBE2D3-205ENST00000350435 TPRG1Q6ZUI0 275 aa10.53□□□□□ -0.72
UBE2D3-205ENST00000350435 ZNF444Q8N0Y2 327 aaPredicted RBP10.53□□□□□ -0.72
UBE2D3-205ENST00000350435 LMBR1Q8WVP7 490 aa10.53□□□□□ -0.72
UBE2D3-205ENST00000350435 LOXL4Q96JB6 756 aa10.53□□□□□ -0.72
UBE2D3-205ENST00000350435 ZFP91Q96JP5 570 aaPredicted RBP10.53□□□□□ -0.72
UBE2D3-205ENST00000350435 IWS1Q96ST2 819 aa10.53□□□□□ -0.72
UBE2D3-205ENST00000350435 IER2Q9BTL4 223 aa10.53□□□□□ -0.72
UBE2D3-205ENST00000350435 EDEM2Q9BV94 578 aa10.53□□□□□ -0.72
UBE2D3-205ENST00000350435 GPCPD1Q9NPB8 672 aa10.53□□□□□ -0.72
UBE2D3-205ENST00000350435 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.53□□□□□ -0.727e-20■□□□□ 9.1
UBE2D3-205ENST00000350435 PNMA2Q9UL42 364 aa10.53□□□□□ -0.72
UBE2D3-205ENST00000350435 SQORQ9Y6N5 450 aa10.53□□□□□ -0.72
UBE2D3-205ENST00000350435 EIF3JO75822 258 aaKnown RBP10.52□□□□□ -0.73
UBE2D3-205ENST00000350435 EPN2O95208 641 aa10.52□□□□□ -0.73
UBE2D3-205ENST00000350435 MBD4O95243 580 aa10.52□□□□□ -0.73
UBE2D3-205ENST00000350435 GGPS1O95749 300 aa10.52□□□□□ -0.73
UBE2D3-205ENST00000350435 RDXP35241 583 aaKnown RBP10.52□□□□□ -0.73
UBE2D3-205ENST00000350435 FGD1P98174 961 aa10.52□□□□□ -0.73
UBE2D3-205ENST00000350435 SCAPQ12770 1279 aa10.52□□□□□ -0.73
UBE2D3-205ENST00000350435 MTX1Q13505 466 aa10.52□□□□□ -0.73
UBE2D3-205ENST00000350435 ZNF852Q6ZMS4 543 aa10.52□□□□□ -0.73
UBE2D3-205ENST00000350435 MAMSTRQ6ZN01 415 aa10.52□□□□□ -0.73
UBE2D3-205ENST00000350435 LONP2Q86WA8 852 aa10.52□□□□□ -0.73
UBE2D3-205ENST00000350435 ZNF843Q8N446 348 aa10.52□□□□□ -0.73
UBE2D3-205ENST00000350435 ST13P5Q8NFI4 369 aaPredicted RBP10.52□□□□□ -0.73
UBE2D3-205ENST00000350435 NSUN6Q8TEA1 469 aaKnown RBP10.52□□□□□ -0.73
UBE2D3-205ENST00000350435 AUTS2Q8WXX7 1259 aa10.52□□□□□ -0.73
UBE2D3-205ENST00000350435 CCDC86Q9H6F5 360 aaKnown RBP10.52□□□□□ -0.73
UBE2D3-205ENST00000350435 MLXIPQ9HAP2 919 aa10.52□□□□□ -0.73
UBE2D3-205ENST00000350435 ARPP21Q9UBL0 812 aaPredicted RBP10.52□□□□□ -0.73
UBE2D3-205ENST00000350435 DBNLQ9UJU6 430 aaKnown RBP10.52□□□□□ -0.73
UBE2D3-205ENST00000350435 CFAP46Q8IYW2 2715 aa10.52□□□□□ -0.73
UBE2D3-205ENST00000350435 CCDC171Q6TFL3 1326 aa10.52□□□□□ -0.73
UBE2D3-205ENST00000350435 CELSR3Q9NYQ7 3312 aa10.51□□□□□ -0.73
UBE2D3-205ENST00000350435 CCDC195A0A1B0GUA6 201 aa10.51□□□□□ -0.73
UBE2D3-205ENST00000350435 M0QZ92 97 aa10.51□□□□□ -0.73
UBE2D3-205ENST00000350435 ATXN7O15265 892 aaPredicted RBP10.51□□□□□ -0.73
UBE2D3-205ENST00000350435 CXCL12P48061 93 aa10.51□□□□□ -0.73
UBE2D3-205ENST00000350435 MRPS6P82932 125 aaKnown RBP10.51□□□□□ -0.73
UBE2D3-205ENST00000350435 PLA2G2CQ5R387 149 aa10.51□□□□□ -0.73
UBE2D3-205ENST00000350435 IER5Q5VY09 327 aa10.51□□□□□ -0.73
UBE2D3-205ENST00000350435 KCNV1Q6PIU1 500 aa10.51□□□□□ -0.73
UBE2D3-205ENST00000350435 CYP26C1Q6V0L0 522 aa10.51□□□□□ -0.73
UBE2D3-205ENST00000350435 GET4Q7L5D6 327 aaPredicted RBP10.51□□□□□ -0.73
UBE2D3-205ENST00000350435 IFNLR1Q8IU57 520 aaPredicted RBP10.51□□□□□ -0.73
UBE2D3-205ENST00000350435 VPS52Q8N1B4 723 aa10.51□□□□□ -0.73
UBE2D3-205ENST00000350435 DNAJB3Q8WWF6 145 aa10.51□□□□□ -0.73
UBE2D3-205ENST00000350435 CHRDQ9H2X0 955 aa10.51□□□□□ -0.73
UBE2D3-205ENST00000350435 SMOC1Q9H4F8 434 aa10.51□□□□□ -0.73
UBE2D3-205ENST00000350435 ATP6V0A4Q9HBG4 840 aa10.51□□□□□ -0.73
UBE2D3-205ENST00000350435 VPS45Q9NRW7 570 aa10.51□□□□□ -0.73
UBE2D3-205ENST00000350435 ZNF215Q9UL58 517 aaPredicted RBP10.51□□□□□ -0.73
UBE2D3-205ENST00000350435 IRAK3Q9Y616 596 aa10.51□□□□□ -0.73
UBE2D3-205ENST00000350435 MYO9AB2RTY4 2548 aa10.51□□□□□ -0.73
UBE2D3-205ENST00000350435 ACACAQ13085 2346 aa10.5□□□□□ -0.73
UBE2D3-205ENST00000350435 TCRBV5S4A2TA0A5A2 114 aa10.5□□□□□ -0.73
UBE2D3-205ENST00000350435 DENND3A2RUS2 1198 aa10.5□□□□□ -0.73
UBE2D3-205ENST00000350435 NOP56O00567 594 aaKnown RBP10.5□□□□□ -0.73
UBE2D3-205ENST00000350435 FGFR1P11362 822 aa10.5□□□□□ -0.73
UBE2D3-205ENST00000350435 OS9Q13438 667 aaPredicted RBP10.5□□□□□ -0.73
UBE2D3-205ENST00000350435 FZD5Q13467 585 aa10.5□□□□□ -0.73
UBE2D3-205ENST00000350435 SLC39A11Q8N1S5 342 aa10.5□□□□□ -0.73
UBE2D3-205ENST00000350435 LRRC43Q8N309 656 aa10.5□□□□□ -0.73
UBE2D3-205ENST00000350435 CMASQ8NFW8 434 aaPredicted RBP10.5□□□□□ -0.73
UBE2D3-205ENST00000350435 TMEM169Q96HH4 297 aa10.5□□□□□ -0.73
UBE2D3-205ENST00000350435 DCBLD2Q96PD2 775 aa10.5□□□□□ -0.73
UBE2D3-205ENST00000350435 TAAR1Q96RJ0 339 aa10.5□□□□□ -0.73
UBE2D3-205ENST00000350435 MEIS3Q99687 375 aa10.5□□□□□ -0.73
UBE2D3-205ENST00000350435 RPP25Q9BUL9 199 aaKnown RBP10.5□□□□□ -0.73
UBE2D3-205ENST00000350435 ZBP1Q9H171 429 aa10.5□□□□□ -0.73
UBE2D3-205ENST00000350435 ZNF287Q9HBT7 754 aa10.5□□□□□ -0.73
UBE2D3-205ENST00000350435 C1orf112Q9NSG2 853 aa10.5□□□□□ -0.73
UBE2D3-205ENST00000350435 TLR7Q9NYK1 1049 aaKnown RBP10.5□□□□□ -0.73
UBE2D3-205ENST00000350435 SLC4A4Q9Y6R1 1079 aa10.5□□□□□ -0.73
UBE2D3-205ENST00000350435 DOCK5Q9H7D0 1870 aa10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 FAM221BA6H8Z2 402 aa10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 CAPN8A6NHC0 703 aa10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 H0Y626 953 aa10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 TRIM16O95361 564 aa10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 RPLP2P05387 115 aaKnown RBP10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 CTSAP10619 480 aa10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 KLRC2P26717 231 aa10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 MPLP40238 635 aa10.49□□□□□ -0.73
UBE2D3-205ENST00000350435 NFX1Q12986 1120 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms