RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 CREB3L3Q68CJ9 461 aa10.62□□□□□ -0.71
CNOT9-202ENST00000295701 WWC2Q6AWC2 1192 aa10.62□□□□□ -0.71
CNOT9-202ENST00000295701 TMTC3Q6ZXV5 915 aa10.62□□□□□ -0.71
CNOT9-202ENST00000295701 HEATR3Q7Z4Q2 680 aa10.62□□□□□ -0.71
CNOT9-202ENST00000295701 FANCBQ8NB91 859 aa10.62□□□□□ -0.71
CNOT9-202ENST00000295701 CDHR1Q96JP9 859 aa10.62□□□□□ -0.71
CNOT9-202ENST00000295701 TMEM87BQ96K49 555 aa10.62□□□□□ -0.71
CNOT9-202ENST00000295701 MXRA8Q9BRK3 442 aa10.62□□□□□ -0.71
CNOT9-202ENST00000295701 C11orf84Q9BUA3 381 aaPredicted RBP10.62□□□□□ -0.71
CNOT9-202ENST00000295701 LMAN2LQ9H0V9 348 aa10.62□□□□□ -0.71
CNOT9-202ENST00000295701 TMX1Q9H3N1 280 aa10.62□□□□□ -0.71
CNOT9-202ENST00000295701 KCNH7Q9NS40 1196 aa10.62□□□□□ -0.71
CNOT9-202ENST00000295701 MUTYHQ9UIF7 546 aa10.62□□□□□ -0.71
CNOT9-202ENST00000295701 PADI3Q9ULW8 664 aa10.62□□□□□ -0.71
CNOT9-202ENST00000295701 TRPV2Q9Y5S1 764 aa10.62□□□□□ -0.71
CNOT9-202ENST00000295701 MYO10Q9HD67 2058 aa10.62□□□□□ -0.71
CNOT9-202ENST00000295701 RRN3P2A6NIE6 340 aa10.61□□□□□ -0.71
CNOT9-202ENST00000295701 DDX39AO00148 427 aaKnown RBP10.61□□□□□ -0.71
CNOT9-202ENST00000295701 ADAMTS3O15072 1205 aa10.61□□□□□ -0.71
CNOT9-202ENST00000295701 PPFIA3O75145 1194 aa10.61□□□□□ -0.71
CNOT9-202ENST00000295701 MMP1P03956 469 aa10.61□□□□□ -0.71
CNOT9-202ENST00000295701 LIFRP42702 1097 aa10.61□□□□□ -0.71
CNOT9-202ENST00000295701 ACTR2P61160 394 aa10.61□□□□□ -0.71
CNOT9-202ENST00000295701 ITGB3BPQ13352 177 aaPredicted RBP10.61□□□□□ -0.71
CNOT9-202ENST00000295701 SMAD2Q15796 467 aaKnown RBP10.61□□□□□ -0.71
CNOT9-202ENST00000295701 CSPP1Q1MSJ5 1256 aa10.61□□□□□ -0.71
CNOT9-202ENST00000295701 LIAT1Q6ZQX7 453 aa10.61□□□□□ -0.71
CNOT9-202ENST00000295701 HFE2Q6ZVN8 426 aa10.61□□□□□ -0.71
CNOT9-202ENST00000295701 RBM23Q86U06 439 aaKnown RBP10.61□□□□□ -0.71
CNOT9-202ENST00000295701 SKAP1Q86WV1 359 aa10.61□□□□□ -0.71
CNOT9-202ENST00000295701 MICU3Q86XE3 530 aa10.61□□□□□ -0.71
CNOT9-202ENST00000295701 TMTC2Q8N394 836 aa10.61□□□□□ -0.71
CNOT9-202ENST00000295701 KLHL23Q8NBE8 558 aa10.61□□□□□ -0.71
CNOT9-202ENST00000295701 POF1BQ8WVV4 589 aa10.61□□□□□ -0.71
CNOT9-202ENST00000295701 TCEANC2Q96MN5 208 aa10.61□□□□□ -0.71
CNOT9-202ENST00000295701 CELF4Q9BZC1 486 aaKnown RBP10.61□□□□□ -0.71
CNOT9-202ENST00000295701 JPH1Q9HDC5 661 aaPredicted RBP10.61□□□□□ -0.71
CNOT9-202ENST00000295701 TMEM260Q9NX78 707 aa10.61□□□□□ -0.71
CNOT9-202ENST00000295701 SLC9A2Q9UBY0 812 aa10.61□□□□□ -0.71
CNOT9-202ENST00000295701 PRKAG3Q9UGI9 489 aa10.61□□□□□ -0.71
CNOT9-202ENST00000295701 SLC27A5Q9Y2P5 690 aa10.61□□□□□ -0.71
CNOT9-202ENST00000295701 PCDHA2Q9Y5H9 948 aa10.61□□□□□ -0.71
CNOT9-202ENST00000295701 PIEZO1Q92508 2521 aa10.61□□□□□ -0.71
CNOT9-202ENST00000295701 STXBP3O00186 592 aa10.6□□□□□ -0.71
CNOT9-202ENST00000295701 NCK2O43639 380 aa10.6□□□□□ -0.71
CNOT9-202ENST00000295701 NRIP1P48552 1158 aa10.6□□□□□ -0.71
CNOT9-202ENST00000295701 STAT5BP51692 787 aa10.6□□□□□ -0.71
CNOT9-202ENST00000295701 RBM10P98175 930 aaKnown RBP10.6□□□□□ -0.71
CNOT9-202ENST00000295701 NECTIN1Q15223 517 aa10.6□□□□□ -0.71
CNOT9-202ENST00000295701 IER5Q5VY09 327 aa10.6□□□□□ -0.71
CNOT9-202ENST00000295701 MTHFD1LQ6UB35 978 aa10.6□□□□□ -0.71
CNOT9-202ENST00000295701 RNF135Q8IUD6 432 aa10.6□□□□□ -0.71
CNOT9-202ENST00000295701 NPAS4Q8IUM7 802 aa10.6□□□□□ -0.71
CNOT9-202ENST00000295701 CMTR2Q8IYT2 770 aaKnown RBP10.6□□□□□ -0.71
CNOT9-202ENST00000295701 THAP11Q96EK4 314 aa10.6□□□□□ -0.71
CNOT9-202ENST00000295701 MSLNLQ96KJ4 702 aa10.6□□□□□ -0.71
CNOT9-202ENST00000295701 FBXL18Q96ME1 805 aa10.6□□□□□ -0.71
CNOT9-202ENST00000295701 PPP1R16BQ96T49 567 aa10.6□□□□□ -0.71
CNOT9-202ENST00000295701 ESYT1Q9BSJ8 1104 aa10.6□□□□□ -0.71
CNOT9-202ENST00000295701 MTA3Q9BTC8 594 aa10.6□□□□□ -0.71
CNOT9-202ENST00000295701 PLVAPQ9BX97 442 aa10.6□□□□□ -0.71
CNOT9-202ENST00000295701 AZI2Q9H6S1 392 aa10.6□□□□□ -0.71
CNOT9-202ENST00000295701 AGO4Q9HCK5 861 aaKnown RBP10.6□□□□□ -0.71
CNOT9-202ENST00000295701 CLEC1BQ9P126 229 aa10.6□□□□□ -0.71
CNOT9-202ENST00000295701 CD207Q9UJ71 328 aa10.6□□□□□ -0.71
CNOT9-202ENST00000295701 BRPF3Q9ULD4 1205 aa10.6□□□□□ -0.71
CNOT9-202ENST00000295701 FAM50BQ9Y247 325 aa10.6□□□□□ -0.71
CNOT9-202ENST00000295701 GINS2Q9Y248 185 aa10.6□□□□□ -0.71
CNOT9-202ENST00000295701 NOC2LQ9Y3T9 749 aaKnown RBP10.6□□□□□ -0.71
CNOT9-202ENST00000295701 RWDD3Q9Y3V2 267 aa10.6□□□□□ -0.71
CNOT9-202ENST00000295701 SLC12A7Q9Y666 1083 aa10.6□□□□□ -0.71
CNOT9-202ENST00000295701 CNTNAP5Q8WYK1 1306 aa10.59□□□□□ -0.71
CNOT9-202ENST00000295701 IGSF9BQ9UPX0 1349 aa10.59□□□□□ -0.71
CNOT9-202ENST00000295701 LCE2BO14633 110 aa10.59□□□□□ -0.71
CNOT9-202ENST00000295701 PER2O15055 1255 aa10.59□□□□□ -0.71
CNOT9-202ENST00000295701 MAFGO15525 162 aa10.59□□□□□ -0.71
CNOT9-202ENST00000295701 ATG7O95352 703 aa10.59□□□□□ -0.71
CNOT9-202ENST00000295701 GLP2RO95838 553 aa10.59□□□□□ -0.71
CNOT9-202ENST00000295701 CCNE2O96020 404 aa10.59□□□□□ -0.71
CNOT9-202ENST00000295701 CALM1P0DP23 149 aa10.59□□□□□ -0.71
CNOT9-202ENST00000295701 CALM2P0DP24 149 aa10.59□□□□□ -0.71
CNOT9-202ENST00000295701 CALM3P0DP25 149 aa10.59□□□□□ -0.71
CNOT9-202ENST00000295701 SCG2P13521 617 aa10.59□□□□□ -0.71
CNOT9-202ENST00000295701 ATP4AP20648 1035 aa10.59□□□□□ -0.71
CNOT9-202ENST00000295701 KLRC1P26715 233 aa10.59□□□□□ -0.71
CNOT9-202ENST00000295701 NDUFV1P49821 464 aa10.59□□□□□ -0.71
CNOT9-202ENST00000295701 NAPAP54920 295 aa10.59□□□□□ -0.71
CNOT9-202ENST00000295701 KRT76Q01546 638 aa10.59□□□□□ -0.71
CNOT9-202ENST00000295701 NHLH1Q02575 133 aa10.59□□□□□ -0.71
CNOT9-202ENST00000295701 NFX1Q12986 1120 aaKnown RBP10.59□□□□□ -0.71
CNOT9-202ENST00000295701 PAK2Q13177 524 aa10.59□□□□□ -0.71
CNOT9-202ENST00000295701 SMAD4Q13485 552 aaKnown RBP10.59□□□□□ -0.71
CNOT9-202ENST00000295701 FAM102BQ5T8I3 360 aa10.59□□□□□ -0.71
CNOT9-202ENST00000295701 PLPPR4Q7Z2D5 763 aa10.59□□□□□ -0.71
CNOT9-202ENST00000295701 ZNF598Q86UK7 904 aaKnown RBP10.59□□□□□ -0.71
CNOT9-202ENST00000295701 TMEM40Q8WWA1 233 aa10.59□□□□□ -0.71
CNOT9-202ENST00000295701 P2RX5Q93086 422 aa10.59□□□□□ -0.71
CNOT9-202ENST00000295701 SDF4Q9BRK5 362 aa10.59□□□□□ -0.71
CNOT9-202ENST00000295701 ANO3Q9BYT9 981 aa10.59□□□□□ -0.71
CNOT9-202ENST00000295701 RIC8AQ9NPQ8 531 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms