RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeast

Gene TGA1, Length 73 nt, Biotype tRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TGA1	tA(UGC)A	THP1	Q08231	455 aa		7.39	□□□□□ -1.23
TGA1	tA(UGC)A	CDC39	P25655	2108 aa	Known RBP	7.39	□□□□□ -1.23
TGA1	tA(UGC)A	MSS18	P08593	268 aa		7.38	□□□□□ -1.23
TGA1	tA(UGC)A	TPO5	P36029	618 aa		7.38	□□□□□ -1.23
TGA1	tA(UGC)A	SKG1	P36169	355 aa		7.38	□□□□□ -1.23
TGA1	tA(UGC)A	YNL208W	P40159	199 aa	Known RBP	7.38	□□□□□ -1.23
TGA1	tA(UGC)A	YNL195C	P40168	261 aa		7.38	□□□□□ -1.23
TGA1	tA(UGC)A	SOK1	P40317	901 aa		7.38	□□□□□ -1.23
TGA1	tA(UGC)A	YFR054C	P43622	192 aa		7.38	□□□□□ -1.23
TGA1	tA(UGC)A	LSG1	P53145	640 aa	Known RBP	7.38	□□□□□ -1.23
TGA1	tA(UGC)A	DCP2	P53550	970 aa	Known RBP	7.38	□□□□□ -1.23
TGA1	tA(UGC)A	URC2	Q04411	772 aa		7.38	□□□□□ -1.23
TGA1	tA(UGC)A	SPO77	Q06134	477 aa		7.38	□□□□□ -1.23
TGA1	tA(UGC)A	PRS5	Q12265	496 aa	Known RBP	7.38	□□□□□ -1.23
TGA1	tA(UGC)A	MTR10	Q99189	972 aa		7.38	□□□□□ -1.23
TGA1	tA(UGC)A	RAD7	P06779	565 aa		7.37	□□□□□ -1.23
TGA1	tA(UGC)A	PBS2	P08018	668 aa		7.37	□□□□□ -1.23
TGA1	tA(UGC)A	NCP1	P16603	691 aa	Known RBP	7.37	□□□□□ -1.23
TGA1	tA(UGC)A	KRE6	P32486	720 aa		7.37	□□□□□ -1.23
TGA1	tA(UGC)A	PEX6	P33760	1030 aa		7.37	□□□□□ -1.23
TGA1	tA(UGC)A	TDP1	P38319	544 aa		7.37	□□□□□ -1.23
TGA1	tA(UGC)A	ECM10	P39987	644 aa		7.37	□□□□□ -1.23
TGA1	tA(UGC)A	YIL169C	P40442	995 aa		7.37	□□□□□ -1.23
TGA1	tA(UGC)A	SNM1	P40993	198 aa		7.37	□□□□□ -1.23
TGA1	tA(UGC)A	YGR201C	P42936	225 aa		7.37	□□□□□ -1.23
TGA1	tA(UGC)A	GET1	P53192	235 aa		7.37	□□□□□ -1.23
TGA1	tA(UGC)A	DBP6	P53734	629 aa	Known RBP	7.37	□□□□□ -1.23
TGA1	tA(UGC)A	YSA1	Q01976	231 aa		7.37	□□□□□ -1.23
TGA1	tA(UGC)A	RIM13	Q03792	727 aa		7.37	□□□□□ -1.23
TGA1	tA(UGC)A	MIX14	Q04341	121 aa		7.37	□□□□□ -1.23
TGA1	tA(UGC)A	BCP1	Q06338	283 aa		7.37	□□□□□ -1.23
TGA1	tA(UGC)A	YOR214C	Q12282	236 aa		7.37	□□□□□ -1.23
TGA1	tA(UGC)A	NPC2	Q12408	173 aa		7.37	□□□□□ -1.23
TGA1	tA(UGC)A	YFR010W-A	P0C5N0	62 aa		7.36	□□□□□ -1.23
TGA1	tA(UGC)A	EXO84	P38261	753 aa		7.36	□□□□□ -1.23
TGA1	tA(UGC)A	GDT1	P38301	280 aa	Predicted RBP	7.36	□□□□□ -1.23
TGA1	tA(UGC)A	ECM34	P38728	170 aa		7.36	□□□□□ -1.23
TGA1	tA(UGC)A	RRP4	P38792	359 aa	Known RBP	7.36	□□□□□ -1.23
TGA1	tA(UGC)A	BIG1	P38813	335 aa		7.36	□□□□□ -1.23
TGA1	tA(UGC)A	PRY1	P47032	299 aa		7.36	□□□□□ -1.23
TGA1	tA(UGC)A	YNR068C	P53754	272 aa		7.36	□□□□□ -1.23
TGA1	tA(UGC)A	UGO1	Q03327	502 aa		7.36	□□□□□ -1.23
TGA1	tA(UGC)A	GAS2	Q06135	555 aa		7.36	□□□□□ -1.23
TGA1	tA(UGC)A	ATG26	Q06321	1198 aa		7.36	□□□□□ -1.23
TGA1	tA(UGC)A	ARV1	Q06541	321 aa		7.36	□□□□□ -1.23
TGA1	tA(UGC)A	GPI11	Q06636	219 aa		7.36	□□□□□ -1.23
TGA1	tA(UGC)A	RDR1	Q08904	546 aa		7.36	□□□□□ -1.23
TGA1	tA(UGC)A	YRA1	Q12159	226 aa	Known RBP	7.36	□□□□□ -1.23
TGA1	tA(UGC)A	YDL199C	Q12407	687 aa		7.36	□□□□□ -1.23
TGA1	tA(UGC)A	YHR214C-D	P0CX93	97 aa		7.35	□□□□□ -1.23
TGA1	tA(UGC)A	YCK1	P23291	538 aa		7.35	□□□□□ -1.23
TGA1	tA(UGC)A	SCO1	P23833	295 aa		7.35	□□□□□ -1.23
TGA1	tA(UGC)A	NFS1	P25374	497 aa		7.35	□□□□□ -1.23
TGA1	tA(UGC)A	PDB1	P32473	366 aa	Known RBP	7.35	□□□□□ -1.23
TGA1	tA(UGC)A	LOT5	P34234	306 aa		7.35	□□□□□ -1.23
TGA1	tA(UGC)A	YKR073C	P36153	106 aa		7.35	□□□□□ -1.23
TGA1	tA(UGC)A	APE4	P38821	490 aa		7.35	□□□□□ -1.23
TGA1	tA(UGC)A	YHR219W	P38900	624 aa		7.35	□□□□□ -1.23
TGA1	tA(UGC)A	RCY1	P39531	840 aa		7.35	□□□□□ -1.23
TGA1	tA(UGC)A	YEL068C	P39977	110 aa		7.35	□□□□□ -1.23
TGA1	tA(UGC)A	YER010C	P40011	234 aa		7.35	□□□□□ -1.23
TGA1	tA(UGC)A	ALG5	P40350	334 aa		7.35	□□□□□ -1.23
TGA1	tA(UGC)A	MNN5	P46982	586 aa		7.35	□□□□□ -1.23
TGA1	tA(UGC)A	NOP9	P47077	666 aa	Known RBP	7.35	□□□□□ -1.23
TGA1	tA(UGC)A	IMD4	P50094	524 aa	Known RBP	7.35	□□□□□ -1.23
TGA1	tA(UGC)A	TWF1	P53250	332 aa		7.35	□□□□□ -1.23
TGA1	tA(UGC)A	SYF2	P53277	215 aa	Predicted RBP	7.35	□□□□□ -1.23
TGA1	tA(UGC)A	GPI1	P53306	609 aa		7.35	□□□□□ -1.23
TGA1	tA(UGC)A	GTR1	Q00582	310 aa		7.35	□□□□□ -1.23
TGA1	tA(UGC)A	SPR6	Q01684	191 aa		7.35	□□□□□ -1.23
TGA1	tA(UGC)A	EKI1	Q03764	534 aa		7.35	□□□□□ -1.23
TGA1	tA(UGC)A	BUR2	Q05949	395 aa		7.35	□□□□□ -1.23
TGA1	tA(UGC)A	SFM1	Q12314	213 aa		7.35	□□□□□ -1.23
TGA1	tA(UGC)A	Q0144	Q9ZZW2	109 aa		7.35	□□□□□ -1.23
TGA1	tA(UGC)A	PMR1	P13586	950 aa		7.34	□□□□□ -1.23
TGA1	tA(UGC)A	CTA1	P15202	515 aa		7.34	□□□□□ -1.23
TGA1	tA(UGC)A	DBP3	P20447	523 aa	Known RBP	7.34	□□□□□ -1.23
TGA1	tA(UGC)A	PWP1	P21304	576 aa	Known RBP	7.34	□□□□□ -1.23
TGA1	tA(UGC)A	CMK2	P22517	447 aa		7.34	□□□□□ -1.23
TGA1	tA(UGC)A	RAD51	P25454	400 aa		7.34	□□□□□ -1.23
TGA1	tA(UGC)A	ERG9	P29704	444 aa		7.34	□□□□□ -1.23
TGA1	tA(UGC)A	TFC1	P32367	649 aa		7.34	□□□□□ -1.23
TGA1	tA(UGC)A	ARP2	P32381	391 aa	Known RBP	7.34	□□□□□ -1.23
TGA1	tA(UGC)A	YBR241C	P38142	488 aa		7.34	□□□□□ -1.23
TGA1	tA(UGC)A	YMR262W	P38430	313 aa		7.34	□□□□□ -1.23
TGA1	tA(UGC)A	YHR097C	P38809	366 aa	Known RBP	7.34	□□□□□ -1.23
TGA1	tA(UGC)A	ALP1	P38971	573 aa		7.34	□□□□□ -1.23
TGA1	tA(UGC)A	TOM22	P49334	152 aa		7.34	□□□□□ -1.23
TGA1	tA(UGC)A	MPC1	P53157	130 aa	Known RBP	7.34	□□□□□ -1.23
TGA1	tA(UGC)A	COS6	P53344	381 aa		7.34	□□□□□ -1.23
TGA1	tA(UGC)A	RSN1	Q03516	953 aa		7.34	□□□□□ -1.23
TGA1	tA(UGC)A	YDR249C	Q03787	373 aa		7.34	□□□□□ -1.23
TGA1	tA(UGC)A	YLR352W	Q06479	807 aa		7.34	□□□□□ -1.23
TGA1	tA(UGC)A	AVO1	Q08236	1176 aa		7.34	□□□□□ -1.23
TGA1	tA(UGC)A	GRE1	Q08969	168 aa		7.34	□□□□□ -1.23
TGA1	tA(UGC)A	SWM1	Q12379	170 aa		7.34	□□□□□ -1.23
TGA1	tA(UGC)A	TSC13	Q99190	310 aa		7.34	□□□□□ -1.23
TGA1	tA(UGC)A	PEX3	P28795	441 aa		7.33	□□□□□ -1.24
TGA1	tA(UGC)A	EHD3	P28817	500 aa		7.33	□□□□□ -1.24
TGA1	tA(UGC)A	FZO1	P38297	855 aa		7.33	□□□□□ -1.24

Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms