RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 FOL1P53848 824 aa-0.28□□□□□ -2.45
snR50snR50 REX2P54964 269 aaKnown RBP-0.28□□□□□ -2.45
snR50snR50 YSA1Q01976 231 aa-0.28□□□□□ -2.45
snR50snR50 NUP49Q02199 472 aa-0.28□□□□□ -2.45
snR50snR50 GIP3Q03016 1276 aa-0.28□□□□□ -2.45
snR50snR50 URH1Q04179 340 aa-0.28□□□□□ -2.45
snR50snR50 YOL029CQ08187 201 aa-0.28□□□□□ -2.45
snR50snR50 RTC5Q12108 567 aaKnown RBP-0.28□□□□□ -2.45
snR50snR50 NMD4Q12129 218 aa-0.28□□□□□ -2.45
snR50snR50 PCL9Q12477 304 aa-0.28□□□□□ -2.45
snR50snR50 TMA7Q3E764 64 aaKnown RBP-0.28□□□□□ -2.45
snR50snR50 PAB1P04147 577 aaKnown RBP RIP-Chip data-0.29□□□□□ -2.46not detected
snR50snR50 ATP4P05626 244 aa-0.29□□□□□ -2.46
snR50snR50 FUM1P08417 488 aaKnown RBP-0.29□□□□□ -2.46
snR50snR50 YOL162WP0CF19 215 aa-0.29□□□□□ -2.46
snR50snR50 IDH2P28241 369 aaKnown RBP-0.29□□□□□ -2.46
snR50snR50 NIP1P32497 812 aaKnown RBP-0.29□□□□□ -2.46
snR50snR50 SEC66P33754 206 aa-0.29□□□□□ -2.46
snR50snR50 COS9P36034 407 aa-0.29□□□□□ -2.46
snR50snR50 CAB3P36076 571 aa-0.29□□□□□ -2.46
snR50snR50 APE3P37302 537 aaKnown RBP-0.29□□□□□ -2.46
snR50snR50 VHC1P38329 1120 aa-0.29□□□□□ -2.46
snR50snR50 GRE3P38715 327 aaKnown RBP RIP-Chip data-0.29□□□□□ -2.46not detected
snR50snR50 FLC2P39719 783 aa-0.29□□□□□ -2.46
snR50snR50 MIC19P43594 170 aa-0.29□□□□□ -2.46
snR50snR50 ECO1P43605 281 aa-0.29□□□□□ -2.46
snR50snR50 YJR054WP47114 497 aa-0.29□□□□□ -2.46
snR50snR50 RPL37AP49166 88 aaKnown RBP-0.29□□□□□ -2.46
snR50snR50 PHB2P50085 310 aa-0.29□□□□□ -2.46
snR50snR50 CDH1P53197 566 aa-0.29□□□□□ -2.46
snR50snR50 KTR5P53966 522 aaPredicted RBP-0.29□□□□□ -2.46
snR50snR50 UBX4P54730 416 aa-0.29□□□□□ -2.46
snR50snR50 BUR2Q05949 395 aa-0.29□□□□□ -2.46
snR50snR50 BUG1Q12191 341 aa-0.29□□□□□ -2.46
snR50snR50 SKM1Q12469 655 aa-0.29□□□□□ -2.46
snR50snR50 GAL80P04387 435 aa-0.3□□□□□ -2.46
snR50snR50 DFR1P07807 211 aaKnown RBP RIP-Chip data-0.3□□□□□ -2.46not detected
snR50snR50 CHA1P25379 360 aaKnown RBP-0.3□□□□□ -2.46
snR50snR50 BRF1P29056 596 aa-0.3□□□□□ -2.46
snR50snR50 ECM8P38246 354 aa-0.3□□□□□ -2.46
snR50snR50 KAP123P40069 1113 aaKnown RBP-0.3□□□□□ -2.46
snR50snR50 YER188WP40103 239 aa-0.3□□□□□ -2.46
snR50snR50 PIB2P53191 635 aa-0.3□□□□□ -2.46
snR50snR50 RRP46P53256 223 aaPredicted RBP-0.3□□□□□ -2.46
snR50snR50 CWC22P53333 577 aaKnown RBP-0.3□□□□□ -2.46
snR50snR50 YMR166CQ03829 368 aa-0.3□□□□□ -2.46
snR50snR50 UTP15Q04305 513 aaKnown RBP-0.3□□□□□ -2.46
snR50snR50 FSH2Q05015 223 aa-0.3□□□□□ -2.46
snR50snR50 MDM30Q05930 598 aa-0.3□□□□□ -2.46
snR50snR50 ECM19Q06011 112 aa-0.3□□□□□ -2.46
snR50snR50 RKM1Q08961 583 aaPredicted RBP-0.3□□□□□ -2.46
snR50snR50 ATP16Q12165 160 aa-0.3□□□□□ -2.46
snR50snR50 YDR018CQ12185 396 aa-0.3□□□□□ -2.46
snR50snR50 HSP42Q12329 375 aa-0.3□□□□□ -2.46
snR50snR50 EMC6Q12431 108 aa-0.3□□□□□ -2.46
snR50snR50 DFM1Q12743 341 aaKnown RBP-0.3□□□□□ -2.46
snR50snR50 POM152P39685 1337 aa-0.31□□□□□ -2.46
snR50snR50 SSM4P40318 1319 aa-0.31□□□□□ -2.46
snR50snR50 SCEIP03882 235 aa-0.31□□□□□ -2.46
snR50snR50 ADE4P04046 510 aaKnown RBP-0.31□□□□□ -2.46
snR50snR50 URA4P20051 364 aa-0.31□□□□□ -2.46
snR50snR50 GEX1P25596 615 aa-0.31□□□□□ -2.46
snR50snR50 RPB9P27999 122 aa-0.31□□□□□ -2.46
snR50snR50 CHS3P29465 1165 aa-0.31□□□□□ -2.46
snR50snR50 SLC1P33333 303 aa-0.31□□□□□ -2.46
snR50snR50 PMT1P33775 817 aa-0.31□□□□□ -2.46
snR50snR50 YBR056WP38081 501 aa-0.31□□□□□ -2.46
snR50snR50 PSY4P38193 441 aa-0.31□□□□□ -2.46
snR50snR50 IST2P38250 946 aa-0.31□□□□□ -2.46
snR50snR50 GPI16P38875 610 aa-0.31□□□□□ -2.46
snR50snR50 NAB3P38996 802 aaKnown RBP RIP-Chip data-0.31□□□□□ -2.46not detected
snR50snR50 HEM14P40012 539 aa-0.31□□□□□ -2.46
snR50snR50 SGN1P40561 250 aaKnown RBP RIP-Chip data-0.31□□□□□ -2.46not detected
snR50snR50 CIN2P46670 268 aa-0.31□□□□□ -2.46
snR50snR50 PHO86P46956 311 aa-0.31□□□□□ -2.46
snR50snR50 TWF1P53250 332 aa-0.31□□□□□ -2.46
snR50snR50 ROY1Q04847 553 aa-0.31□□□□□ -2.46
snR50snR50 IES3Q12345 250 aa-0.31□□□□□ -2.46
snR50snR50 DCP1Q12517 231 aaPredicted RBP-0.31□□□□□ -2.46
snR50snR50 MEX67Q99257 599 aaKnown RBP-0.31□□□□□ -2.46
snR50snR50 HEM4P06174 275 aa-0.32□□□□□ -2.46
snR50snR50 CDC7P06243 507 aa-0.32□□□□□ -2.46
snR50snR50 SSC1P0CS90 654 aaKnown RBP-0.32□□□□□ -2.46
snR50snR50 ERG3P32353 365 aa-0.32□□□□□ -2.46
snR50snR50 MRS6P32864 603 aaKnown RBP-0.32□□□□□ -2.46
snR50snR50 SKI2P35207 1287 aaKnown RBP RIP-Chip data-0.32□□□□□ -2.46not detected
snR50snR50 RRG9P40156 214 aa-0.32□□□□□ -2.46
snR50snR50 YIL054WP40524 105 aa-0.32□□□□□ -2.46
snR50snR50 LYS14P40971 790 aa-0.32□□□□□ -2.46
snR50snR50 PMT5P52867 743 aa-0.32□□□□□ -2.46
snR50snR50 SDS23P53172 527 aa-0.32□□□□□ -2.46
snR50snR50 YGR117CP53270 476 aa-0.32□□□□□ -2.46
snR50snR50 COS6P53344 381 aa-0.32□□□□□ -2.46
snR50snR50 DOS2P54858 310 aa-0.32□□□□□ -2.46
snR50snR50 SLT2Q00772 484 aa-0.32□□□□□ -2.46
snR50snR50 MMT1Q03218 510 aa-0.32□□□□□ -2.46
snR50snR50 SPO77Q06134 477 aa-0.32□□□□□ -2.46
snR50snR50 YPL150WQ12152 901 aa-0.32□□□□□ -2.46
snR50snR50 YBR126W-AQ8TGU7 68 aa-0.32□□□□□ -2.46
snR50snR50 VAR1P02381 398 aa-0.33□□□□□ -2.46
Retrieved 100 of 5,963 RNA–protein pairs in 49.5 ms