RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeastyeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP16YPL072W MUD1P32605 298 aaKnown RBP2.36□□□□□ -2.03
UBP16YPL072W PTK1P36002 662 aaPredicted RBP2.36□□□□□ -2.03
UBP16YPL072W MID2P36027 376 aa2.36□□□□□ -2.03
UBP16YPL072W MRPL10P36520 322 aa2.36□□□□□ -2.03
UBP16YPL072W PCH2P38126 564 aa2.36□□□□□ -2.03
UBP16YPL072W END3P39013 349 aa2.36□□□□□ -2.03
UBP16YPL072W SSO2P39926 295 aa2.36□□□□□ -2.03
UBP16YPL072W YFR018CP43599 363 aa2.36□□□□□ -2.03
UBP16YPL072W YPR078CQ06813 372 aa2.36□□□□□ -2.03
UBP16YPL072W ASA1Q06822 443 aa2.36□□□□□ -2.03
UBP16YPL072W SRL2Q12020 392 aa2.36□□□□□ -2.03
UBP16YPL072W NCA2Q12374 616 aa2.36□□□□□ -2.03
UBP16YPL072W RMD5Q12508 421 aa2.36□□□□□ -2.03
UBP16YPL072W CBP2P03874 630 aaPredicted RBP2.35□□□□□ -2.03
UBP16YPL072W CDC37P06101 506 aaKnown RBP2.35□□□□□ -2.03
UBP16YPL072W CYC3P06182 269 aa2.35□□□□□ -2.03
UBP16YPL072W YLL053CP0CD98 152 aa2.35□□□□□ -2.03
UBP16YPL072W PUT4P15380 627 aa2.35□□□□□ -2.03
UBP16YPL072W SAG1P20840 650 aa2.35□□□□□ -2.03
UBP16YPL072W MRPL8P22353 238 aa2.35□□□□□ -2.03
UBP16YPL072W PET18P25362 215 aa2.35□□□□□ -2.03
UBP16YPL072W EFB1P32471 206 aaKnown RBP2.35□□□□□ -2.03
UBP16YPL072W NUP2P32499 720 aa2.35□□□□□ -2.03
UBP16YPL072W MRPL40P36534 297 aa2.35□□□□□ -2.03
UBP16YPL072W STP2P38704 541 aa2.35□□□□□ -2.03
UBP16YPL072W SEC9P40357 651 aa2.35□□□□□ -2.03
UBP16YPL072W GAB1P41733 394 aa2.35□□□□□ -2.03
UBP16YPL072W TOS3P43637 560 aa2.35□□□□□ -2.03
UBP16YPL072W SFH5P47008 294 aa2.35□□□□□ -2.03
UBP16YPL072W AZR1P50080 613 aa2.35□□□□□ -2.03
UBP16YPL072W TRM112P53738 135 aaPredicted RBP2.35□□□□□ -2.03
UBP16YPL072W PRO2P54885 456 aaKnown RBP2.35□□□□□ -2.03
UBP16YPL072W SPR6Q01684 191 aa2.35□□□□□ -2.03
UBP16YPL072W EGD1Q02642 157 aaKnown RBP2.35□□□□□ -2.03
UBP16YPL072W SNT309Q06091 175 aaPredicted RBP2.35□□□□□ -2.03
UBP16YPL072W SFG1Q12507 346 aa2.35□□□□□ -2.03
UBP16YPL072W RGS2Q99188 309 aa2.35□□□□□ -2.03
UBP16YPL072W GAL7P08431 366 aa2.34□□□□□ -2.03
UBP16YPL072W HXT2P23585 541 aa2.34□□□□□ -2.03
UBP16YPL072W LIN1P38852 340 aaPredicted RBP2.34□□□□□ -2.03
UBP16YPL072W YHR177WP38867 453 aa2.34□□□□□ -2.03
UBP16YPL072W ALP1P38971 573 aa2.34□□□□□ -2.03
UBP16YPL072W PRP39P39682 629 aaKnown RBP2.34□□□□□ -2.03
UBP16YPL072W LYS12P40495 371 aaKnown RBP2.34□□□□□ -2.03
UBP16YPL072W STE24P47154 453 aa2.34□□□□□ -2.03
UBP16YPL072W YGR117CP53270 476 aa2.34□□□□□ -2.03
UBP16YPL072W RET3P53600 189 aa2.34□□□□□ -2.03
UBP16YPL072W YOL075CQ08234 1294 aa2.34□□□□□ -2.03
UBP16YPL072W YOP1Q12402 180 aa2.34□□□□□ -2.03
UBP16YPL072W FSH3Q99369 266 aa2.34□□□□□ -2.03
UBP16YPL072W POM152P39685 1337 aa2.33□□□□□ -2.04
UBP16YPL072W VPS63O13549 108 aa2.33□□□□□ -2.04
UBP16YPL072W GAL3P13045 520 aa2.33□□□□□ -2.04
UBP16YPL072W DBR1P24309 405 aaKnown RBP2.33□□□□□ -2.04
UBP16YPL072W YCL068CP25593 260 aa2.33□□□□□ -2.04
UBP16YPL072W VPS45P38932 577 aa2.33□□□□□ -2.04
UBP16YPL072W MNN9P39107 395 aaKnown RBP2.33□□□□□ -2.04
UBP16YPL072W UTP18P40362 594 aaPredicted RBP2.33□□□□□ -2.04
UBP16YPL072W ERV25P54837 211 aaKnown RBP2.33□□□□□ -2.04
UBP16YPL072W ABZ2Q03266 374 aa2.33□□□□□ -2.04
UBP16YPL072W YMR010WQ03687 405 aa2.33□□□□□ -2.04
UBP16YPL072W CCE1Q03702 353 aa2.33□□□□□ -2.04
UBP16YPL072W VPS20Q04272 221 aa2.33□□□□□ -2.04
UBP16YPL072W BCH1Q05029 724 aa2.33□□□□□ -2.04
UBP16YPL072W HTZ1Q12692 134 aaKnown RBP2.33□□□□□ -2.04
UBP16YPL072W RNA1P11745 407 aaKnown RBP2.32□□□□□ -2.04
UBP16YPL072W RIB7P33312 244 aa2.32□□□□□ -2.04
UBP16YPL072W CHK1P38147 527 aa2.32□□□□□ -2.04
UBP16YPL072W RTC2P38279 296 aa2.32□□□□□ -2.04
UBP16YPL072W YHR131CP38835 850 aa2.32□□□□□ -2.04
UBP16YPL072W COX14P39103 70 aa2.32□□□□□ -2.04
UBP16YPL072W PMT5P52867 743 aa2.32□□□□□ -2.04
UBP16YPL072W SMP3Q04174 516 aa2.32□□□□□ -2.04
UBP16YPL072W AIM33Q04516 312 aa2.32□□□□□ -2.04
UBP16YPL072W YLR413WQ06689 675 aa2.32□□□□□ -2.04
UBP16YPL072W RAX1Q08760 435 aa2.32□□□□□ -2.04
UBP16YPL072W YOR012WQ12351 137 aa2.32□□□□□ -2.04
UBP16YPL072W SPO24Q3E752 67 aa2.32□□□□□ -2.04
UBP16YPL072W PAB1P04147 577 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
UBP16YPL072W MAS2P11914 482 aa2.32□□□□□ -2.04
UBP16YPL072W SAR1P20606 190 aaKnown RBP2.32□□□□□ -2.04
UBP16YPL072W YEF1P32622 495 aa2.32□□□□□ -2.04
UBP16YPL072W CSE2P33308 149 aa2.32□□□□□ -2.04
UBP16YPL072W MCR1P36060 302 aaKnown RBP2.32□□□□□ -2.04
UBP16YPL072W SWC5P38326 303 aa2.32□□□□□ -2.04
UBP16YPL072W GEP4P38812 185 aa2.32□□□□□ -2.04
UBP16YPL072W YHR182WP38870 785 aa2.32□□□□□ -2.04
UBP16YPL072W AIM10P39965 576 aaKnown RBP2.32□□□□□ -2.04
UBP16YPL072W AIM20P40451 204 aa2.32□□□□□ -2.04
UBP16YPL072W YJR085CP47131 105 aaKnown RBP2.32□□□□□ -2.04
UBP16YPL072W VOA1P53262 265 aa2.32□□□□□ -2.04
UBP16YPL072W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
UBP16YPL072W RNY1Q02933 434 aaKnown RBP2.32□□□□□ -2.04
UBP16YPL072W CAB5Q03941 241 aa2.32□□□□□ -2.04
UBP16YPL072W BUR2Q05949 395 aa2.32□□□□□ -2.04
UBP16YPL072W SHS1Q07657 551 aa2.32□□□□□ -2.04
UBP16YPL072W LOT6Q07923 191 aa2.32□□□□□ -2.04
UBP16YPL072W APC5Q08683 685 aa2.32□□□□□ -2.04
UBP16YPL072W PLP2Q12017 286 aa2.32□□□□□ -2.04
UBP16YPL072W AHC1Q12433 566 aa2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms