RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C YDR278CQ05612 105 aa3.83□□□□□ -1.8
SNF8YPL002C NOP6Q07623 225 aaKnown RBP3.83□□□□□ -1.8
SNF8YPL002C YDL242WQ07746 117 aa3.83□□□□□ -1.8
SNF8YPL002C ATX2Q12067 313 aa3.83□□□□□ -1.8
SNF8YPL002C YLR049CQ12110 428 aa3.83□□□□□ -1.8
SNF8YPL002C ADF1Q2V2Q1 113 aa3.83□□□□□ -1.8
SNF8YPL002C SLH1P53327 1967 aaKnown RBP3.82□□□□□ -1.8
SNF8YPL002C TEF1P02994 458 aaKnown RBP3.82□□□□□ -1.8
SNF8YPL002C CDC24P11433 854 aaPredicted RBP3.82□□□□□ -1.8
SNF8YPL002C SEN2P16658 377 aa3.82□□□□□ -1.8
SNF8YPL002C YCR043CP25361 127 aa3.82□□□□□ -1.8
SNF8YPL002C CHA1P25379 360 aaKnown RBP3.82□□□□□ -1.8
SNF8YPL002C MGR1P25573 417 aa3.82□□□□□ -1.8
SNF8YPL002C ADE1P27616 306 aa3.82□□□□□ -1.8
SNF8YPL002C ASF2P32448 525 aaPredicted RBP3.82□□□□□ -1.8
SNF8YPL002C KRE6P32486 720 aa3.82□□□□□ -1.8
SNF8YPL002C RPN2P32565 945 aaKnown RBP3.82□□□□□ -1.8
SNF8YPL002C TIF3P34167 436 aaKnown RBP3.82□□□□□ -1.8
SNF8YPL002C MUD2P36084 527 aaKnown RBP3.82□□□□□ -1.8
SNF8YPL002C ECM4P36156 370 aa3.82□□□□□ -1.8
SNF8YPL002C RRN10P38204 145 aa3.82□□□□□ -1.8
SNF8YPL002C YEL057CP39983 233 aa3.82□□□□□ -1.8
SNF8YPL002C TPA1P40032 644 aaKnown RBP3.82□□□□□ -1.8
SNF8YPL002C LSM4P40070 187 aaKnown RBP3.82□□□□□ -1.8
SNF8YPL002C YJR149WP47177 404 aa3.82□□□□□ -1.8
SNF8YPL002C MDM34P53083 459 aa3.82□□□□□ -1.8
SNF8YPL002C INN1P53901 409 aa3.82□□□□□ -1.8
SNF8YPL002C BOP3P53958 396 aa3.82□□□□□ -1.8
SNF8YPL002C YDR209CQ03480 137 aa3.82□□□□□ -1.8
SNF8YPL002C ROY1Q04847 553 aa3.82□□□□□ -1.8
SNF8YPL002C CRN1Q06440 651 aa3.82□□□□□ -1.8
SNF8YPL002C ATG23Q06671 453 aa3.82□□□□□ -1.8
SNF8YPL002C YOR376WQ08900 122 aa3.82□□□□□ -1.8
SNF8YPL002C BAG7Q12128 409 aa3.82□□□□□ -1.8
SNF8YPL002C AVL9Q12500 764 aa3.82□□□□□ -1.8
SNF8YPL002C SRN2Q99176 213 aa3.82□□□□□ -1.8
SNF8YPL002C MSS116P15424 664 aaKnown RBP3.81□□□□□ -1.8
SNF8YPL002C ITR1P30605 584 aa3.81□□□□□ -1.8
SNF8YPL002C DBF20P32328 564 aa3.81□□□□□ -1.8
SNF8YPL002C SSE1P32589 693 aaKnown RBP3.81□□□□□ -1.8
SNF8YPL002C PPQ1P32945 549 aa3.81□□□□□ -1.8
SNF8YPL002C RPS27AP35997 82 aaKnown RBP3.81□□□□□ -1.8
SNF8YPL002C YBR139WP38109 508 aa3.81□□□□□ -1.8
SNF8YPL002C PCH2P38126 564 aa3.81□□□□□ -1.8
SNF8YPL002C PEX32P38292 413 aa3.81□□□□□ -1.8
SNF8YPL002C OM14P38325 134 aa3.81□□□□□ -1.8
SNF8YPL002C RPS27BP38711 82 aa3.81□□□□□ -1.8
SNF8YPL002C EFM1P38732 585 aa3.81□□□□□ -1.8
SNF8YPL002C TDA11P38854 504 aa3.81□□□□□ -1.8
SNF8YPL002C PRP39P39682 629 aaKnown RBP3.81□□□□□ -1.8
SNF8YPL002C YMR134WP40207 237 aa3.81□□□□□ -1.8
SNF8YPL002C NIT2P47016 307 aa3.81□□□□□ -1.8
SNF8YPL002C YGR015CP53208 328 aa3.81□□□□□ -1.8
SNF8YPL002C YNL260CP53846 198 aa3.81□□□□□ -1.8
SNF8YPL002C SOV1Q04748 898 aa3.81□□□□□ -1.8
SNF8YPL002C MLC2Q06580 163 aa3.81□□□□□ -1.8
SNF8YPL002C ARR2Q06597 130 aa3.81□□□□□ -1.8
SNF8YPL002C NUS1Q12063 375 aa3.81□□□□□ -1.8
SNF8YPL002C MDM32Q12171 622 aa3.81□□□□□ -1.8
SNF8YPL002C RIO1Q12196 484 aaKnown RBP3.81□□□□□ -1.8
SNF8YPL002C UBX3Q12229 455 aa3.81□□□□□ -1.8
SNF8YPL002C YOR032W-AQ8TGS1 66 aa3.81□□□□□ -1.8
SNF8YPL002C CDC21P06785 304 aa3.8□□□□□ -1.8
SNF8YPL002C MXR2P25566 168 aa3.8□□□□□ -1.8
SNF8YPL002C URA10P30402 227 aa3.8□□□□□ -1.8
SNF8YPL002C ZUO1P32527 433 aaKnown RBP3.8□□□□□ -1.8
SNF8YPL002C IFA38P38286 347 aa3.8□□□□□ -1.8
SNF8YPL002C ARC40P38328 384 aaKnown RBP3.8□□□□□ -1.8
SNF8YPL002C VHC1P38329 1120 aa3.8□□□□□ -1.8
SNF8YPL002C PET100P38958 111 aa3.8□□□□□ -1.8
SNF8YPL002C END3P39013 349 aa3.8□□□□□ -1.8
SNF8YPL002C AIM10P39965 576 aaKnown RBP3.8□□□□□ -1.8
SNF8YPL002C MET18P40469 1032 aa3.8□□□□□ -1.8
SNF8YPL002C APQ12P40532 138 aa3.8□□□□□ -1.8
SNF8YPL002C IDS2P46958 469 aa3.8□□□□□ -1.8
SNF8YPL002C RPN14P53196 417 aa3.8□□□□□ -1.8
SNF8YPL002C AAT1Q01802 451 aa3.8□□□□□ -1.8
SNF8YPL002C RSM28Q03430 361 aa3.8□□□□□ -1.8
SNF8YPL002C YKU80Q04437 629 aa3.8□□□□□ -1.8
SNF8YPL002C BCH1Q05029 724 aa3.8□□□□□ -1.8
SNF8YPL002C BOP2Q06150 570 aa3.8□□□□□ -1.8
SNF8YPL002C PHO92Q06390 306 aa3.8□□□□□ -1.8
SNF8YPL002C VAM6Q07468 1049 aa3.8□□□□□ -1.8
SNF8YPL002C LOT6Q07923 191 aa3.8□□□□□ -1.8
SNF8YPL002C BRX1Q08235 291 aaKnown RBP3.8□□□□□ -1.8
SNF8YPL002C CUE5Q08412 411 aaKnown RBP3.8□□□□□ -1.8
SNF8YPL002C MMT2Q08970 484 aa3.8□□□□□ -1.8
SNF8YPL002C COR1P07256 457 aa3.79□□□□□ -1.8
SNF8YPL002C IMA3P0CW40 589 aa3.79□□□□□ -1.8
SNF8YPL002C IMA4P0CW41 589 aa3.79□□□□□ -1.8
SNF8YPL002C PDX1P16451 410 aa3.79□□□□□ -1.8
SNF8YPL002C PHO3P24031 467 aa3.79□□□□□ -1.8
SNF8YPL002C SPS22P25380 463 aa3.79□□□□□ -1.8
SNF8YPL002C SPB1P25582 841 aaPredicted RBP3.79□□□□□ -1.8
SNF8YPL002C TAH1P25638 111 aaPredicted RBP3.79□□□□□ -1.8
SNF8YPL002C YCR061WP25639 631 aa3.79□□□□□ -1.8
SNF8YPL002C PRE2P30656 287 aaKnown RBP3.79□□□□□ -1.8
SNF8YPL002C SCO2P38072 301 aa3.79□□□□□ -1.8
SNF8YPL002C POP4P38336 279 aa3.79□□□□□ -1.8
SNF8YPL002C RCK2P38623 610 aa3.79□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 36.7 ms