RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C RPN13O13563 156 aa5.5□□□□□ -1.53
SSK1YLR006C GCN3P14741 305 aa5.5□□□□□ -1.53
SSK1YLR006C SAG1P20840 650 aa5.5□□□□□ -1.53
SSK1YLR006C CDC5P32562 705 aa5.5□□□□□ -1.53
SSK1YLR006C YKR051WP36142 418 aa5.5□□□□□ -1.53
SSK1YLR006C ARP1P38696 384 aa5.5□□□□□ -1.53
SSK1YLR006C VMA22P38784 181 aa5.5□□□□□ -1.53
SSK1YLR006C DHH1P39517 506 aaKnown RBP5.5□□□□□ -1.53
SSK1YLR006C RCY1P39531 840 aa5.5□□□□□ -1.53
SSK1YLR006C RBG1P39729 369 aa5.5□□□□□ -1.53
SSK1YLR006C YER184CP39961 794 aa5.5□□□□□ -1.53
SSK1YLR006C SNG1P46950 547 aa5.5□□□□□ -1.53
SSK1YLR006C PEF1P53238 335 aa5.5□□□□□ -1.53
SSK1YLR006C CLD1P53264 445 aa5.5□□□□□ -1.53
SSK1YLR006C ORC3P54790 616 aa5.5□□□□□ -1.53
SSK1YLR006C YAT1P80235 687 aa5.5□□□□□ -1.53
SSK1YLR006C BNA7Q04066 261 aa5.5□□□□□ -1.53
SSK1YLR006C EMI2Q04409 500 aaKnown RBP5.5□□□□□ -1.53
SSK1YLR006C LDB18Q07887 179 aa5.5□□□□□ -1.53
SSK1YLR006C AI1P03875 834 aa5.49□□□□□ -1.53
SSK1YLR006C BUD23P25627 275 aaPredicted RBP5.49□□□□□ -1.53
SSK1YLR006C VMA6P32366 345 aaKnown RBP5.49□□□□□ -1.53
SSK1YLR006C YKL063CP35725 167 aa5.49□□□□□ -1.53
SSK1YLR006C TFA2P36145 328 aa5.49□□□□□ -1.53
SSK1YLR006C YPK3P38070 525 aa5.49□□□□□ -1.53
SSK1YLR006C SSH1P38353 490 aaKnown RBP5.49□□□□□ -1.53
SSK1YLR006C YHL026CP38740 315 aa5.49□□□□□ -1.53
SSK1YLR006C AIM46P38885 310 aa5.49□□□□□ -1.53
SSK1YLR006C HRB1P38922 454 aaKnown RBP RIP-Chip data5.49□□□□□ -1.53not detected
SSK1YLR006C MPT5P39016 859 aaKnown RBP RIP-Chip data5.49□□□□□ -1.53 RIP-Chip
SSK1YLR006C GIM4P40005 111 aaKnown RBP5.49□□□□□ -1.53
SSK1YLR006C YKE4P40544 346 aa5.49□□□□□ -1.53
SSK1YLR006C FKH2P41813 862 aa5.49□□□□□ -1.53
SSK1YLR006C MTR3P48240 250 aaPredicted RBP5.49□□□□□ -1.53
SSK1YLR006C COP1P53622 1201 aaKnown RBP5.49□□□□□ -1.53
SSK1YLR006C YNL181WP53878 407 aa5.49□□□□□ -1.53
SSK1YLR006C INN1P53901 409 aa5.49□□□□□ -1.53
SSK1YLR006C APC4Q04601 652 aa5.49□□□□□ -1.53
SSK1YLR006C YHC1Q05900 231 aaKnown RBP5.49□□□□□ -1.53
SSK1YLR006C SOG2Q08817 791 aa5.49□□□□□ -1.53
SSK1YLR006C FMP16Q12497 93 aa5.49□□□□□ -1.53
SSK1YLR006C PRC1P00729 532 aa5.48□□□□□ -1.53
SSK1YLR006C MF(ALPHA)1P01149 165 aa5.48□□□□□ -1.53
SSK1YLR006C PUT2P07275 575 aa5.48□□□□□ -1.53
SSK1YLR006C REV1P12689 985 aa5.48□□□□□ -1.53
SSK1YLR006C KGD2P19262 463 aaPredicted RBP5.48□□□□□ -1.53
SSK1YLR006C ZRC1P20107 442 aa5.48□□□□□ -1.53
SSK1YLR006C AAT2P23542 418 aaKnown RBP5.48□□□□□ -1.53
SSK1YLR006C RBK1P25332 333 aa5.48□□□□□ -1.53
SSK1YLR006C GBP2P25555 427 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53not detected
SSK1YLR006C DCC1P25559 380 aa5.48□□□□□ -1.53
SSK1YLR006C MGR1P25573 417 aa5.48□□□□□ -1.53
SSK1YLR006C ARP2P32381 391 aaKnown RBP5.48□□□□□ -1.53
SSK1YLR006C RPD3P32561 433 aa5.48□□□□□ -1.53
SSK1YLR006C STE14P32584 239 aa5.48□□□□□ -1.53
SSK1YLR006C ADD66P36040 267 aa5.48□□□□□ -1.53
SSK1YLR006C TAT1P38085 619 aa5.48□□□□□ -1.53
SSK1YLR006C IML3P38265 245 aa5.48□□□□□ -1.53
SSK1YLR006C SBE22P38814 852 aa5.48□□□□□ -1.53
SSK1YLR006C LNP1P38878 278 aa5.48□□□□□ -1.53
SSK1YLR006C FET3P38993 636 aa5.48□□□□□ -1.53
SSK1YLR006C YEL020CP39994 560 aa5.48□□□□□ -1.53
SSK1YLR006C KRE29P40026 464 aa5.48□□□□□ -1.53
SSK1YLR006C RGI1P40043 161 aaPredicted RBP5.48□□□□□ -1.53
SSK1YLR006C RFC4P40339 323 aaKnown RBP5.48□□□□□ -1.53
SSK1YLR006C RTS2P40962 232 aa5.48□□□□□ -1.53
SSK1YLR006C SHR5P41912 237 aa5.48□□□□□ -1.53
SSK1YLR006C YPT32P51996 222 aaKnown RBP5.48□□□□□ -1.53
SSK1YLR006C RMD9P53140 646 aaKnown RBP5.48□□□□□ -1.53
SSK1YLR006C YDR248CQ03786 193 aa5.48□□□□□ -1.53
SSK1YLR006C HED1Q03937 162 aa5.48□□□□□ -1.53
SSK1YLR006C GPN3Q06543 272 aa5.48□□□□□ -1.53
SSK1YLR006C NOP12Q08208 459 aaKnown RBP5.48□□□□□ -1.53
SSK1YLR006C AHA1Q12449 350 aaKnown RBP5.48□□□□□ -1.53
SSK1YLR006C SOD2P00447 233 aa5.48□□□□□ -1.53
SSK1YLR006C TPK3P05986 398 aa5.48□□□□□ -1.53
SSK1YLR006C SCH9P11792 824 aaKnown RBP5.48□□□□□ -1.53
SSK1YLR006C SPS19P32573 292 aaKnown RBP5.48□□□□□ -1.53
SSK1YLR006C TUL1P36096 758 aa5.48□□□□□ -1.53
SSK1YLR006C APT2P36973 181 aa5.48□□□□□ -1.53
SSK1YLR006C SEC72P39742 193 aaKnown RBP5.48□□□□□ -1.53
SSK1YLR006C PTR3P43606 678 aa5.48□□□□□ -1.53
SSK1YLR006C COG1P53079 417 aa5.48□□□□□ -1.53
SSK1YLR006C TRM112P53738 135 aaPredicted RBP5.48□□□□□ -1.53
SSK1YLR006C COG5P53951 403 aa5.48□□□□□ -1.53
SSK1YLR006C SPR6Q01684 191 aa5.48□□□□□ -1.53
SSK1YLR006C RSC9Q03124 581 aa5.48□□□□□ -1.53
SSK1YLR006C SPO77Q06134 477 aa5.48□□□□□ -1.53
SSK1YLR006C VTA1Q06263 330 aa5.48□□□□□ -1.53
SSK1YLR006C PKH2Q12236 1081 aaKnown RBP5.48□□□□□ -1.53
SSK1YLR006C BMT6Q12291 365 aa5.48□□□□□ -1.53
SSK1YLR006C RPN6Q12377 434 aa5.48□□□□□ -1.53
SSK1YLR006C ICT1Q12385 394 aa5.48□□□□□ -1.53
SSK1YLR006C RMD5Q12508 421 aa5.48□□□□□ -1.53
SSK1YLR006C MED11Q99278 115 aa5.48□□□□□ -1.53
SSK1YLR006C TY1A-DR4O74302 440 aa5.47□□□□□ -1.53
SSK1YLR006C RAS2P01120 322 aaKnown RBP5.47□□□□□ -1.53
SSK1YLR006C DST1P07273 309 aa5.47□□□□□ -1.53
SSK1YLR006C TY1A-HP0C2I4 478 aaKnown RBP5.47□□□□□ -1.53
SSK1YLR006C TY1A-AP0CX57 440 aa5.47□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 97 ms