RNA–Protein interactions for RNA: YJR132W

NMD5, Transcript of Karyopherin, yeastyeast

Gene NMD5, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD5YJR132W PFS1P38872 237 aa6.39□□□□□ -1.39
NMD5YJR132W RIB4P50861 169 aaPredicted RBP6.39□□□□□ -1.39
NMD5YJR132W CWC23P52868 283 aaPredicted RBP6.39□□□□□ -1.39
NMD5YJR132W RMD9P53140 646 aaKnown RBP6.39□□□□□ -1.39
NMD5YJR132W YNL184CP53876 108 aa6.39□□□□□ -1.39
NMD5YJR132W ARG5,6Q01217 863 aa6.39□□□□□ -1.39
NMD5YJR132W YDR132CQ03900 495 aa6.39□□□□□ -1.39
NMD5YJR132W PPN1Q04119 674 aa6.39□□□□□ -1.39
NMD5YJR132W DAL4Q04895 635 aa6.39□□□□□ -1.39
NMD5YJR132W DPP1Q05521 289 aa6.39□□□□□ -1.39
NMD5YJR132W WTM1Q12363 437 aaKnown RBP6.39□□□□□ -1.39
NMD5YJR132W ATP2P00830 511 aaKnown RBP6.39□□□□□ -1.39
NMD5YJR132W MSN1P22148 382 aa6.39□□□□□ -1.39
NMD5YJR132W SRB5P32585 307 aa6.39□□□□□ -1.39
NMD5YJR132W PHD1P36093 366 aa6.39□□□□□ -1.39
NMD5YJR132W CAK1P43568 368 aaPredicted RBP6.39□□□□□ -1.39
NMD5YJR132W GET1P53192 235 aa6.39□□□□□ -1.39
NMD5YJR132W PLB2Q03674 706 aa6.39□□□□□ -1.39
NMD5YJR132W DCI1Q08558 271 aa6.39□□□□□ -1.39
NMD5YJR132W SVS1Q12254 260 aa6.39□□□□□ -1.39
NMD5YJR132W MRP13P12686 339 aa6.39□□□□□ -1.39
NMD5YJR132W SBA1P28707 216 aaKnown RBP6.39□□□□□ -1.39
NMD5YJR132W PRS3P38689 320 aaKnown RBP6.39□□□□□ -1.39
NMD5YJR132W ELO3P40319 345 aa6.39□□□□□ -1.39
NMD5YJR132W BIT61P47041 543 aa6.39□□□□□ -1.39
NMD5YJR132W APT1P49435 187 aaKnown RBP6.39□□□□□ -1.39
NMD5YJR132W TRM112P53738 135 aaPredicted RBP6.39□□□□□ -1.39
NMD5YJR132W DEG1P31115 442 aaKnown RBP6.38□□□□□ -1.39
NMD5YJR132W TRM2P33753 639 aa6.38□□□□□ -1.39
NMD5YJR132W TCM62P38228 572 aaKnown RBP6.38□□□□□ -1.39
NMD5YJR132W IML3P38265 245 aa6.38□□□□□ -1.39
NMD5YJR132W RRT2P38332 387 aa6.38□□□□□ -1.39
NMD5YJR132W YIL067CP40514 678 aa6.38□□□□□ -1.39
NMD5YJR132W GUF1P46943 645 aa6.38□□□□□ -1.39
NMD5YJR132W ECM27P47144 725 aa6.38□□□□□ -1.39
NMD5YJR132W SWC4P53201 476 aa6.38□□□□□ -1.39
NMD5YJR132W YGR026WP53217 278 aa6.38□□□□□ -1.39
NMD5YJR132W OCA2P53949 197 aa6.38□□□□□ -1.39
NMD5YJR132W YPL077CQ02831 240 aa6.38□□□□□ -1.39
NMD5YJR132W DDI2P0CH63 225 aa6.38□□□□□ -1.39
NMD5YJR132W DDI3P0CH64 225 aa6.38□□□□□ -1.39
NMD5YJR132W STE18P18852 110 aa6.38□□□□□ -1.39
NMD5YJR132W ADD66P36040 267 aa6.38□□□□□ -1.39
NMD5YJR132W MRPL3P36516 390 aa6.38□□□□□ -1.39
NMD5YJR132W BNA4P38169 460 aa6.38□□□□□ -1.39
NMD5YJR132W PSF2P40359 213 aa6.38□□□□□ -1.39
NMD5YJR132W COG7P53195 279 aa6.38□□□□□ -1.39
NMD5YJR132W YGR079WP53249 370 aa6.38□□□□□ -1.39
NMD5YJR132W PFA5Q03289 374 aa6.38□□□□□ -1.39
NMD5YJR132W CCE1Q03702 353 aa6.38□□□□□ -1.39
NMD5YJR132W AGE1Q04412 482 aa6.38□□□□□ -1.39
NMD5YJR132W YDR278CQ05612 105 aa6.38□□□□□ -1.39
NMD5YJR132W PEX30Q06169 523 aa6.38□□□□□ -1.39
NMD5YJR132W YOR238WQ08634 303 aa6.38□□□□□ -1.39
NMD5YJR132W TPT1Q12272 230 aaKnown RBP6.38□□□□□ -1.39
NMD5YJR132W POM152P39685 1337 aa6.38□□□□□ -1.39
NMD5YJR132W COBP00163 385 aa6.37□□□□□ -1.39
NMD5YJR132W HAP2P06774 265 aa6.37□□□□□ -1.39
NMD5YJR132W NUP1P20676 1076 aa6.37□□□□□ -1.39
NMD5YJR132W DGR2P32330 852 aa6.37□□□□□ -1.39
NMD5YJR132W NDC1P32500 655 aa6.37□□□□□ -1.39
NMD5YJR132W LEU5P38702 357 aa6.37□□□□□ -1.39
NMD5YJR132W GPI14P47088 403 aaKnown RBP6.37□□□□□ -1.39
NMD5YJR132W YPT11P48559 417 aa6.37□□□□□ -1.39
NMD5YJR132W YCL001W-AP87012 153 aa6.37□□□□□ -1.39
NMD5YJR132W YPL113CQ02961 396 aa6.37□□□□□ -1.39
NMD5YJR132W RAD34Q06665 692 aa6.37□□□□□ -1.39
NMD5YJR132W HRD1Q08109 551 aa6.37□□□□□ -1.39
NMD5YJR132W YBR126W-AQ8TGU7 68 aa6.37□□□□□ -1.39
NMD5YJR132W THP2O13539 261 aaKnown RBP6.37□□□□□ -1.39
NMD5YJR132W PUT1P09368 476 aa6.37□□□□□ -1.39
NMD5YJR132W CUP2P15315 225 aa6.37□□□□□ -1.39
NMD5YJR132W SEC59P20048 519 aa6.37□□□□□ -1.39
NMD5YJR132W AHC2P25649 128 aa6.37□□□□□ -1.39
NMD5YJR132W RML2P32611 393 aa6.37□□□□□ -1.39
NMD5YJR132W UGA4P32837 571 aa6.37□□□□□ -1.39
NMD5YJR132W YKR078WP36158 585 aaKnown RBP6.37□□□□□ -1.39
NMD5YJR132W UBP6P43593 499 aaKnown RBP6.37□□□□□ -1.39
NMD5YJR132W AIM22P47051 409 aa6.37□□□□□ -1.39
NMD5YJR132W YNL115CP53925 644 aa6.37□□□□□ -1.39
NMD5YJR132W YLR225CQ05948 407 aaKnown RBP6.37□□□□□ -1.39
NMD5YJR132W FCY22Q12119 530 aa6.37□□□□□ -1.39
NMD5YJR132W USB1Q12208 290 aaKnown RBP6.37□□□□□ -1.39
NMD5YJR132W ULS1Q08562 1619 aa6.37□□□□□ -1.39
NMD5YJR132W ADH2P00331 348 aaKnown RBP6.36□□□□□ -1.39
NMD5YJR132W EXG1P23776 448 aaKnown RBP6.36□□□□□ -1.39
NMD5YJR132W UTP30P36144 274 aaKnown RBP6.36□□□□□ -1.39
NMD5YJR132W MLH1P38920 769 aa6.36□□□□□ -1.39
NMD5YJR132W MAF1P41910 395 aa6.36□□□□□ -1.39
NMD5YJR132W SLS1P42900 643 aa6.36□□□□□ -1.39
NMD5YJR132W YGR210CP42942 411 aa6.36□□□□□ -1.39
NMD5YJR132W YLR460CP54007 376 aa6.36□□□□□ -1.39
NMD5YJR132W MEU1Q07938 337 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
NMD5YJR132W TPO4Q12256 659 aa6.36□□□□□ -1.39
NMD5YJR132W YHR213W-AQ8TGT4 77 aa6.36□□□□□ -1.39
NMD5YJR132W UTP10P42945 1769 aaKnown RBP6.36□□□□□ -1.39
NMD5YJR132W SNQ2P32568 1501 aaKnown RBP6.36□□□□□ -1.39
NMD5YJR132W PRE1P22141 198 aaKnown RBP6.36□□□□□ -1.39
NMD5YJR132W RPS1BP23248 255 aaKnown RBP6.36□□□□□ -1.39
NMD5YJR132W RPL24BP24000 155 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms