RNA–Protein interactions for RNA: YIL156W

UBP7, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeast

Gene UBP7, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP7	YIL156W	CBR1	P38626	284 aa	Known RBP	4.67	□□□□□ -1.66
UBP7	YIL156W	YMR134W	P40207	237 aa		4.67	□□□□□ -1.66
UBP7	YIL156W	YIL060W	P40519	144 aa		4.67	□□□□□ -1.66
UBP7	YIL156W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
UBP7	YIL156W	YGR168C	P53293	376 aa		4.67	□□□□□ -1.66
UBP7	YIL156W	ASI1	P54074	624 aa		4.67	□□□□□ -1.66
UBP7	YIL156W	FMP30	Q02883	468 aa		4.67	□□□□□ -1.66
UBP7	YIL156W	SUC2	P00724	532 aa		4.67	□□□□□ -1.66
UBP7	YIL156W	PRP16	P15938	1071 aa	Predicted RBP	4.67	□□□□□ -1.66
UBP7	YIL156W	GAS1	P22146	559 aa	Known RBP	4.67	□□□□□ -1.66
UBP7	YIL156W	APE2	P32454	952 aa	Known RBP	4.67	□□□□□ -1.66
UBP7	YIL156W	YKL162C	P36052	402 aa		4.67	□□□□□ -1.66
UBP7	YIL156W	AIM29	P36154	155 aa		4.67	□□□□□ -1.66
UBP7	YIL156W	ERV46	P39727	415 aa		4.67	□□□□□ -1.66
UBP7	YIL156W	HAM1	P47119	197 aa	Known RBP	4.67	□□□□□ -1.66
UBP7	YIL156W	HSH155	P49955	971 aa	Known RBP	4.67	□□□□□ -1.66
UBP7	YIL156W	KAP114	P53067	1004 aa		4.67	□□□□□ -1.66
UBP7	YIL156W	MUK1	Q02866	612 aa		4.67	□□□□□ -1.66
UBP7	YIL156W	RLI1	Q03195	608 aa	Known RBP	4.67	□□□□□ -1.66
UBP7	YIL156W	YOL075C	Q08234	1294 aa		4.67	□□□□□ -1.66
UBP7	YIL156W	MED7	Q08278	222 aa		4.67	□□□□□ -1.66
UBP7	YIL156W	YOR389W	Q08912	624 aa		4.67	□□□□□ -1.66
UBP7	YIL156W	YLL056C	Q12177	298 aa		4.67	□□□□□ -1.66
UBP7	YIL156W	RPL7A	P05737	244 aa	Known RBP	4.67	□□□□□ -1.66
UBP7	YIL156W	PPR1	P07272	904 aa	Predicted RBP	4.67	□□□□□ -1.66
UBP7	YIL156W	BAR1	P12630	587 aa		4.67	□□□□□ -1.66
UBP7	YIL156W	ITR1	P30605	584 aa		4.67	□□□□□ -1.66
UBP7	YIL156W	YAL037W	P39728	267 aa		4.67	□□□□□ -1.66
UBP7	YIL156W	LYS12	P40495	371 aa	Known RBP	4.67	□□□□□ -1.66
UBP7	YIL156W	YLR040C	Q07988	224 aa		4.67	□□□□□ -1.66
UBP7	YIL156W	RPL7B	Q12213	244 aa	Known RBP	4.67	□□□□□ -1.66
UBP7	YIL156W	APA2	P22108	325 aa		4.66	□□□□□ -1.66
UBP7	YIL156W	STE11	P23561	717 aa		4.66	□□□□□ -1.66
UBP7	YIL156W	BTT1	P40314	149 aa	Predicted RBP	4.66	□□□□□ -1.66
UBP7	YIL156W	IZH1	Q03419	316 aa		4.66	□□□□□ -1.66
UBP7	YIL156W	PAM18	Q07914	168 aa		4.66	□□□□□ -1.66
UBP7	YIL156W	YPR053C	Q6Q5F3	151 aa		4.66	□□□□□ -1.66
UBP7	YIL156W	CLN3	P13365	580 aa		4.66	□□□□□ -1.66
UBP7	YIL156W	PPZ1	P26570	692 aa		4.66	□□□□□ -1.66
UBP7	YIL156W	SKN1	P33336	771 aa		4.66	□□□□□ -1.66
UBP7	YIL156W	HIT1	P46973	164 aa		4.66	□□□□□ -1.66
UBP7	YIL156W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
UBP7	YIL156W	LDS2	Q08218	356 aa		4.66	□□□□□ -1.66
UBP7	YIL156W	FKS3	Q04952	1785 aa		4.65	□□□□□ -1.66
UBP7	YIL156W	MET16	P18408	261 aa	Predicted RBP	4.65	□□□□□ -1.66
UBP7	YIL156W	MXR2	P25566	168 aa		4.65	□□□□□ -1.66
UBP7	YIL156W	SUL1	P38359	859 aa		4.65	□□□□□ -1.66
UBP7	YIL156W	ASA1	Q06822	443 aa		4.65	□□□□□ -1.66
UBP7	YIL156W	CMS1	Q07897	291 aa	Known RBP	4.65	□□□□□ -1.66
UBP7	YIL156W	ATG34	Q12292	412 aa		4.65	□□□□□ -1.66
UBP7	YIL156W	ADH2	P00331	348 aa	Known RBP	4.65	□□□□□ -1.67
UBP7	YIL156W	RAD7	P06779	565 aa		4.65	□□□□□ -1.67
UBP7	YIL156W	YSR3	P23501	404 aa		4.65	□□□□□ -1.67
UBP7	YIL156W	ZUO1	P32527	433 aa	Known RBP	4.65	□□□□□ -1.67
UBP7	YIL156W	GMC2	Q06201	188 aa		4.65	□□□□□ -1.67
UBP7	YIL156W	PIG1	Q06216	648 aa		4.65	□□□□□ -1.67
UBP7	YIL156W	URB1	P34241	1764 aa	Known RBP	4.65	□□□□□ -1.67
UBP7	YIL156W	MAS2	P11914	482 aa		4.65	□□□□□ -1.67
UBP7	YIL156W	COQ1	P18900	473 aa		4.65	□□□□□ -1.67
UBP7	YIL156W	PMA2	P19657	947 aa		4.65	□□□□□ -1.67
UBP7	YIL156W	CTR86	P25355	563 aa		4.65	□□□□□ -1.67
UBP7	YIL156W	PBN1	P25580	416 aa		4.65	□□□□□ -1.67
UBP7	YIL156W	PPA2	P28239	310 aa		4.65	□□□□□ -1.67
UBP7	YIL156W	PCL5	P38794	229 aa		4.65	□□□□□ -1.67
UBP7	YIL156W	BIG1	P38813	335 aa		4.65	□□□□□ -1.67
UBP7	YIL156W	MRX5	P47007	382 aa		4.65	□□□□□ -1.67
UBP7	YIL156W	TOS2	P50078	622 aa		4.65	□□□□□ -1.67
UBP7	YIL156W	MNN10	P50108	393 aa	Known RBP	4.65	□□□□□ -1.67
UBP7	YIL156W	PKP2	P53170	491 aa		4.65	□□□□□ -1.67
UBP7	YIL156W	GPI15	P53961	229 aa		4.65	□□□□□ -1.67
UBP7	YIL156W	YPL014W	Q02606	381 aa		4.65	□□□□□ -1.67
UBP7	YIL156W	MMT1	Q03218	510 aa		4.65	□□□□□ -1.67
UBP7	YIL156W	NHP6B	P11633	99 aa	Known RBP	4.64	□□□□□ -1.67
UBP7	YIL156W	GCG1	P32656	232 aa	Known RBP	4.64	□□□□□ -1.67
UBP7	YIL156W	LAG1	P38703	411 aa		4.64	□□□□□ -1.67
UBP7	YIL156W	EXO1	P39875	702 aa		4.64	□□□□□ -1.67
UBP7	YIL156W	GRS2	Q06817	618 aa		4.64	□□□□□ -1.67
UBP7	YIL156W	SIA1	Q12212	622 aa		4.64	□□□□□ -1.67
UBP7	YIL156W	YKL097C	P34245	136 aa		4.64	□□□□□ -1.67
UBP7	YIL156W	MYO3	P36006	1272 aa		4.64	□□□□□ -1.67
UBP7	YIL156W	LDB7	P38210	180 aa		4.64	□□□□□ -1.67
UBP7	YIL156W	HIS2	P38635	335 aa		4.64	□□□□□ -1.67
UBP7	YIL156W	MMF1	P40185	145 aa	Known RBP	4.64	□□□□□ -1.67
UBP7	YIL156W	UTP18	P40362	594 aa	Predicted RBP	4.64	□□□□□ -1.67
UBP7	YIL156W	BET4	Q00618	327 aa		4.64	□□□□□ -1.67
UBP7	YIL156W	MCH4	Q08268	501 aa		4.64	□□□□□ -1.67
UBP7	YIL156W	SLF1	Q12034	447 aa	Known RBP	4.64	□□□□□ -1.67
UBP7	YIL156W	RKM5	Q12367	367 aa		4.64	□□□□□ -1.67
UBP7	YIL156W	ARF1	P11076	181 aa	Known RBP	4.63	□□□□□ -1.67
UBP7	YIL156W	ZRC1	P20107	442 aa		4.63	□□□□□ -1.67
UBP7	YIL156W	MAK32	P23060	363 aa		4.63	□□□□□ -1.67
UBP7	YIL156W	RRT12	P25381	491 aa		4.63	□□□□□ -1.67
UBP7	YIL156W	RPS5	P26783	225 aa	Known RBP	4.63	□□□□□ -1.67
UBP7	YIL156W	YPK3	P38070	525 aa		4.63	□□□□□ -1.67
UBP7	YIL156W	AIM3	P38266	947 aa	Known RBP	4.63	□□□□□ -1.67
UBP7	YIL156W	BDH2	P39713	417 aa		4.63	□□□□□ -1.67
UBP7	YIL156W	ASN1	P49089	572 aa	Known RBP	4.63	□□□□□ -1.67
UBP7	YIL156W	YMR209C	Q03648	457 aa		4.63	□□□□□ -1.67
UBP7	YIL156W	UBX2	Q04228	584 aa		4.63	□□□□□ -1.67
UBP7	YIL156W	NAT4	Q04751	285 aa		4.63	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 18 ms