RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W GPX2P38143 162 aa4.73□□□□□ -1.65
MSH1YHR120W ATG7P38862 630 aa4.73□□□□□ -1.65
MSH1YHR120W AIM22P47051 409 aa4.73□□□□□ -1.65
MSH1YHR120W ATG38Q05789 226 aaKnown RBP4.73□□□□□ -1.65
MSH1YHR120W COS7Q07788 383 aa4.73□□□□□ -1.65
MSH1YHR120W HSP42Q12329 375 aa4.73□□□□□ -1.65
MSH1YHR120W CYR1P08678 2026 aaKnown RBP4.72□□□□□ -1.65
MSH1YHR120W KAR1P11927 433 aa4.72□□□□□ -1.65
MSH1YHR120W IDH2P28241 369 aaKnown RBP4.72□□□□□ -1.65
MSH1YHR120W AHP1P38013 176 aaKnown RBP4.72□□□□□ -1.65
MSH1YHR120W BNA4P38169 460 aa4.72□□□□□ -1.65
MSH1YHR120W STE24P47154 453 aa4.72□□□□□ -1.65
MSH1YHR120W RAD17P48581 401 aa4.72□□□□□ -1.65
MSH1YHR120W TPP1Q03796 238 aa4.72□□□□□ -1.65
MSH1YHR120W MGR3Q04472 501 aa4.72□□□□□ -1.65
MSH1YHR120W ARR1Q06596 294 aa4.72□□□□□ -1.65
MSH1YHR120W HOM3P10869 527 aa4.72□□□□□ -1.65
MSH1YHR120W MDH1P17505 334 aaKnown RBP RIP-Chip data4.72□□□□□ -1.65not detected
MSH1YHR120W VPS33P20795 691 aa4.72□□□□□ -1.65
MSH1YHR120W SSH4P32343 579 aa4.72□□□□□ -1.65
MSH1YHR120W CDC12P32468 407 aaKnown RBP4.72□□□□□ -1.65
MSH1YHR120W MKK2P32491 506 aa4.72□□□□□ -1.65
MSH1YHR120W SPO23P33757 523 aa4.72□□□□□ -1.65
MSH1YHR120W OAR1P35731 278 aa4.72□□□□□ -1.65
MSH1YHR120W PRP39P39682 629 aaKnown RBP4.72□□□□□ -1.65
MSH1YHR120W MSE1P48525 536 aa4.72□□□□□ -1.65
MSH1YHR120W SNF12P53628 566 aa4.72□□□□□ -1.65
MSH1YHR120W GOR1P53839 350 aa4.72□□□□□ -1.65
MSH1YHR120W DMA2P53924 522 aa4.72□□□□□ -1.65
MSH1YHR120W ELP4Q02884 456 aaKnown RBP4.72□□□□□ -1.65
MSH1YHR120W SWF1Q04629 336 aa4.72□□□□□ -1.65
MSH1YHR120W YLR446WQ06204 433 aa4.72□□□□□ -1.65
MSH1YHR120W YPL066WQ12194 479 aa4.72□□□□□ -1.65
MSH1YHR120W TFS1P14306 219 aa4.71□□□□□ -1.65
MSH1YHR120W FAA1P30624 700 aaKnown RBP4.71□□□□□ -1.65
MSH1YHR120W PCL6P40038 420 aa4.71□□□□□ -1.65
MSH1YHR120W SSY5P47002 699 aa4.71□□□□□ -1.65
MSH1YHR120W MUP1P50276 574 aa4.71□□□□□ -1.65
MSH1YHR120W PRM8P53174 237 aa4.71□□□□□ -1.65
MSH1YHR120W NQM1P53228 333 aaPredicted RBP4.71□□□□□ -1.65
MSH1YHR120W YMR010WQ03687 405 aa4.71□□□□□ -1.65
MSH1YHR120W PLP1Q04004 230 aa4.71□□□□□ -1.65
MSH1YHR120W MRX10Q05648 414 aa4.71□□□□□ -1.65
MSH1YHR120W GCN1P33892 2672 aaKnown RBP4.71□□□□□ -1.66
MSH1YHR120W COX1P00401 534 aa4.71□□□□□ -1.66
MSH1YHR120W RPL6BP05739 176 aaKnown RBP4.71□□□□□ -1.66
MSH1YHR120W PUT2P07275 575 aa4.71□□□□□ -1.66
MSH1YHR120W NPR1P22211 790 aa4.71□□□□□ -1.66
MSH1YHR120W SYP1P25623 870 aaKnown RBP4.71□□□□□ -1.66
MSH1YHR120W GLG1P36143 616 aa4.71□□□□□ -1.66
MSH1YHR120W YHK8P38776 514 aa4.71□□□□□ -1.66
MSH1YHR120W VMA22P38784 181 aa4.71□□□□□ -1.66
MSH1YHR120W YHR219WP38900 624 aa4.71□□□□□ -1.66
MSH1YHR120W DLD3P39976 496 aaKnown RBP4.71□□□□□ -1.66
MSH1YHR120W COG3P40094 801 aa4.71□□□□□ -1.66
MSH1YHR120W IKS1P47042 667 aa4.71□□□□□ -1.66
MSH1YHR120W TIM54P47045 478 aa4.71□□□□□ -1.66
MSH1YHR120W MSC1Q03104 513 aa4.71□□□□□ -1.66
MSH1YHR120W ABZ2Q03266 374 aa4.71□□□□□ -1.66
MSH1YHR120W VPS74Q06385 345 aa4.71□□□□□ -1.66
MSH1YHR120W GSH2Q08220 491 aa4.71□□□□□ -1.66
MSH1YHR120W YPL191CQ08930 360 aa4.71□□□□□ -1.66
MSH1YHR120W RBD2Q12270 262 aa4.71□□□□□ -1.66
MSH1YHR120W SNF8Q12483 233 aa4.71□□□□□ -1.66
MSH1YHR120W CDC26P14724 124 aa4.71□□□□□ -1.66
MSH1YHR120W RRP7P25368 297 aaPredicted RBP4.71□□□□□ -1.66
MSH1YHR120W HSP30P25619 332 aa4.71□□□□□ -1.66
MSH1YHR120W LYP1P32487 611 aa4.71□□□□□ -1.66
MSH1YHR120W MBA1P38300 278 aa4.71□□□□□ -1.66
MSH1YHR120W COS111P38308 924 aa4.71□□□□□ -1.66
MSH1YHR120W PET100P38958 111 aa4.71□□□□□ -1.66
MSH1YHR120W PSA1P41940 361 aaKnown RBP4.71□□□□□ -1.66
MSH1YHR120W NUP49Q02199 472 aa4.71□□□□□ -1.66
MSH1YHR120W RQC1Q05468 723 aaKnown RBP4.71□□□□□ -1.66
MSH1YHR120W NOP12Q08208 459 aaKnown RBP4.71□□□□□ -1.66
MSH1YHR120W ACF2Q12168 779 aa4.71□□□□□ -1.66
MSH1YHR120W RTN2Q12443 393 aa4.71□□□□□ -1.66
MSH1YHR120W SLH1P53327 1967 aaKnown RBP4.7□□□□□ -1.66
MSH1YHR120W STE7P06784 515 aa4.7□□□□□ -1.66
MSH1YHR120W UNG1P12887 359 aa4.7□□□□□ -1.66
MSH1YHR120W YJU2P28320 278 aaPredicted RBP4.7□□□□□ -1.66
MSH1YHR120W LST4P34239 828 aa4.7□□□□□ -1.66
MSH1YHR120W MNN2P38069 597 aa4.7□□□□□ -1.66
MSH1YHR120W MBP1P39678 833 aa4.7□□□□□ -1.66
MSH1YHR120W FMP52P40008 231 aa4.7□□□□□ -1.66
MSH1YHR120W SOK1P40317 901 aa4.7□□□□□ -1.66
MSH1YHR120W RET2P43621 546 aa4.7□□□□□ -1.66
MSH1YHR120W YJL043WP47053 257 aa4.7□□□□□ -1.66
MSH1YHR120W YMD8Q03697 442 aa4.7□□□□□ -1.66
MSH1YHR120W THP3Q12049 470 aaKnown RBP4.7□□□□□ -1.66
MSH1YHR120W MSL5Q12186 476 aaKnown RBP RIP-Chip data4.7□□□□□ -1.66not detected
MSH1YHR120W YPR1Q12458 312 aa4.7□□□□□ -1.66
MSH1YHR120W CAP2P13517 287 aa4.7□□□□□ -1.66
MSH1YHR120W IDP1P21954 428 aaKnown RBP4.7□□□□□ -1.66
MSH1YHR120W SEC17P32602 292 aa4.7□□□□□ -1.66
MSH1YHR120W LOT5P34234 306 aa4.7□□□□□ -1.66
MSH1YHR120W DOA1P36037 715 aa4.7□□□□□ -1.66
MSH1YHR120W PMT4P46971 762 aa4.7□□□□□ -1.66
MSH1YHR120W LCL3P53153 274 aa4.7□□□□□ -1.66
MSH1YHR120W MRH4P53166 561 aa4.7□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms