RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W YDR157WA0A023PZE8 133 aa5.39□□□□□ -1.55
VMS1YDR049W RPS4AP0CX35 261 aaKnown RBP5.39□□□□□ -1.55
VMS1YDR049W RPS4BP0CX36 261 aaKnown RBP5.39□□□□□ -1.55
VMS1YDR049W CLN3P13365 580 aa5.39□□□□□ -1.55
VMS1YDR049W SAM35P14693 329 aa5.39□□□□□ -1.55
VMS1YDR049W SGV1P23293 657 aaKnown RBP5.39□□□□□ -1.55
VMS1YDR049W CTR86P25355 563 aa5.39□□□□□ -1.55
VMS1YDR049W RFA3P26755 122 aaKnown RBP5.39□□□□□ -1.55
VMS1YDR049W GAC1P28006 793 aa5.39□□□□□ -1.55
VMS1YDR049W VPS21P36017 210 aaKnown RBP5.39□□□□□ -1.55
VMS1YDR049W YKL162CP36052 402 aa5.39□□□□□ -1.55
VMS1YDR049W SDH8P38345 138 aa5.39□□□□□ -1.55
VMS1YDR049W PCF11P39081 626 aaPredicted RBP5.39□□□□□ -1.55
VMS1YDR049W FRT2P39734 528 aa5.39□□□□□ -1.55
VMS1YDR049W YMR134WP40207 237 aa5.39□□□□□ -1.55
VMS1YDR049W RPN11P43588 306 aaKnown RBP5.39□□□□□ -1.55
VMS1YDR049W MTL1P53214 551 aa5.39□□□□□ -1.55
VMS1YDR049W KTR5P53966 522 aaPredicted RBP5.39□□□□□ -1.55
VMS1YDR049W YDR248CQ03786 193 aa5.39□□□□□ -1.55
VMS1YDR049W UBX2Q04228 584 aa5.39□□□□□ -1.55
VMS1YDR049W YMR087WQ04299 284 aa5.39□□□□□ -1.55
VMS1YDR049W MRI1Q06489 411 aaKnown RBP5.39□□□□□ -1.55
VMS1YDR049W RPN8Q08723 338 aaKnown RBP5.39□□□□□ -1.55
VMS1YDR049W YER175W-AQ8TGU4 54 aa5.39□□□□□ -1.55
VMS1YDR049W MLP2P40457 1679 aa5.38□□□□□ -1.55
VMS1YDR049W HIS5P07172 385 aa5.38□□□□□ -1.55
VMS1YDR049W MRP1P10662 321 aaKnown RBP5.38□□□□□ -1.55
VMS1YDR049W PDC5P16467 563 aaKnown RBP5.38□□□□□ -1.55
VMS1YDR049W CNA1P23287 553 aa5.38□□□□□ -1.55
VMS1YDR049W GLY1P37303 387 aaKnown RBP5.38□□□□□ -1.55
VMS1YDR049W RRN10P38204 145 aa5.38□□□□□ -1.55
VMS1YDR049W BTT1P40314 149 aaPredicted RBP5.38□□□□□ -1.55
VMS1YDR049W IRC24P40580 263 aa5.38□□□□□ -1.55
VMS1YDR049W ALB1P47019 175 aaPredicted RBP5.38□□□□□ -1.55
VMS1YDR049W MSY1P48527 492 aa5.38□□□□□ -1.55
VMS1YDR049W NSA1P53136 463 aaPredicted RBP5.38□□□□□ -1.55
VMS1YDR049W YGR035CP53222 116 aa5.38□□□□□ -1.55
VMS1YDR049W FHN1P53279 174 aa5.38□□□□□ -1.55
VMS1YDR049W YGR168CP53293 376 aa5.38□□□□□ -1.55
VMS1YDR049W RCF2P53721 224 aa5.38□□□□□ -1.55
VMS1YDR049W APM1Q00776 475 aaPredicted RBP5.38□□□□□ -1.55
VMS1YDR049W YMR178WQ03219 274 aaKnown RBP5.38□□□□□ -1.55
VMS1YDR049W TY1A-DR2Q03964 440 aaKnown RBP5.38□□□□□ -1.55
VMS1YDR049W ACK1Q07622 623 aaPredicted RBP5.38□□□□□ -1.55
VMS1YDR049W ACF2Q12168 779 aa5.38□□□□□ -1.55
VMS1YDR049W FSH3Q99369 266 aa5.38□□□□□ -1.55
VMS1YDR049W YOR1P53049 1477 aa5.38□□□□□ -1.55
VMS1YDR049W PAN1P32521 1480 aa5.37□□□□□ -1.55
VMS1YDR049W RFC5P38251 354 aa5.37□□□□□ -1.55
VMS1YDR049W INM1P38710 295 aa5.37□□□□□ -1.55
VMS1YDR049W MBB1P39534 108 aa5.37□□□□□ -1.55
VMS1YDR049W VRG4P40107 337 aa5.37□□□□□ -1.55
VMS1YDR049W YIR016WP40572 265 aa5.37□□□□□ -1.55
VMS1YDR049W BAP3P41815 604 aa5.37□□□□□ -1.55
VMS1YDR049W MSC1Q03104 513 aa5.37□□□□□ -1.55
VMS1YDR049W DXO1Q06349 442 aa5.37□□□□□ -1.55
VMS1YDR049W TEN1Q07921 160 aa5.37□□□□□ -1.55
VMS1YDR049W YOL019WQ08157 551 aa5.37□□□□□ -1.55
VMS1YDR049W YPR022CQ12139 1133 aa5.37□□□□□ -1.55
VMS1YDR049W TPT1Q12272 230 aaKnown RBP5.37□□□□□ -1.55
VMS1YDR049W RGS2Q99188 309 aa5.37□□□□□ -1.55
VMS1YDR049W TY2B-BQ12491 1770 aa5.37□□□□□ -1.55
VMS1YDR049W TOP2P06786 1428 aaKnown RBP5.37□□□□□ -1.55
VMS1YDR049W COR1P07256 457 aa5.37□□□□□ -1.55
VMS1YDR049W PPZ1P26570 692 aa5.37□□□□□ -1.55
VMS1YDR049W SSH1P38353 490 aaKnown RBP5.37□□□□□ -1.55
VMS1YDR049W YHL012WP38709 493 aa5.37□□□□□ -1.55
VMS1YDR049W CIN4P39110 191 aa5.37□□□□□ -1.55
VMS1YDR049W ECM10P39987 644 aa5.37□□□□□ -1.55
VMS1YDR049W SCW11P53189 542 aa5.37□□□□□ -1.55
VMS1YDR049W BIO4P53630 237 aa5.37□□□□□ -1.55
VMS1YDR049W NDE2Q07500 545 aa5.37□□□□□ -1.55
VMS1YDR049W GAS5Q08193 484 aa5.37□□□□□ -1.55
VMS1YDR049W YLR053CQ12026 108 aa5.37□□□□□ -1.55
VMS1YDR049W RIB2Q12362 591 aaKnown RBP5.37□□□□□ -1.55
VMS1YDR049W WTM1Q12363 437 aaKnown RBP5.37□□□□□ -1.55
VMS1YDR049W EMP46Q12396 444 aa5.37□□□□□ -1.55
VMS1YDR049W COX1P00401 534 aa5.36□□□□□ -1.55
VMS1YDR049W APL1P27351 700 aa5.36□□□□□ -1.55
VMS1YDR049W VPH2P32341 215 aa5.36□□□□□ -1.55
VMS1YDR049W SOF1P33750 489 aaKnown RBP5.36□□□□□ -1.55
VMS1YDR049W IKI1P38874 309 aa5.36□□□□□ -1.55
VMS1YDR049W HAT2P39984 401 aa5.36□□□□□ -1.55
VMS1YDR049W LCP5P40079 357 aaPredicted RBP5.36□□□□□ -1.55
VMS1YDR049W YFR057WP43625 151 aa5.36□□□□□ -1.55
VMS1YDR049W YET3Q07451 203 aa5.36□□□□□ -1.55
VMS1YDR049W AI5_ALPHAQ9ZZX1 630 aa5.36□□□□□ -1.55
VMS1YDR049W PPR1P07272 904 aaPredicted RBP5.35□□□□□ -1.55
VMS1YDR049W CDC20P26309 610 aa5.35□□□□□ -1.55
VMS1YDR049W IES6P32617 166 aa5.35□□□□□ -1.55
VMS1YDR049W HES1P35843 434 aa5.35□□□□□ -1.55
VMS1YDR049W MCH2P36032 473 aa5.35□□□□□ -1.55
VMS1YDR049W RPL32P38061 130 aaKnown RBP5.35□□□□□ -1.55
VMS1YDR049W ECM8P38246 354 aa5.35□□□□□ -1.55
VMS1YDR049W RRP4P38792 359 aaKnown RBP5.35□□□□□ -1.55
VMS1YDR049W CYC2P38909 366 aa5.35□□□□□ -1.55
VMS1YDR049W HOC1P47124 396 aa5.35□□□□□ -1.55
VMS1YDR049W YJR141WP47172 347 aaPredicted RBP5.35□□□□□ -1.55
VMS1YDR049W LYS20P48570 428 aaKnown RBP5.35□□□□□ -1.55
VMS1YDR049W NQM1P53228 333 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms