RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-223	ENST00000604624	CCDC197	Q8NCU1	140 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	DEPDC1B	Q8WUY9	529 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	ESR2	Q92731	530 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	THOC1	Q96FV9	657 aa	Known RBP	4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	DPH5	Q9H2P9	285 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	FAM207A	Q9NSI2	230 aa	Predicted RBP	4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	TMOD3	Q9NYL9	352 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	BRWD1	Q9NSI6	2320 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	CP	P00450	1065 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	KRT16	P08779	473 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	GJA1	P17302	382 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	KLHL30	Q0D2K2	578 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	SEMA3F	Q13275	785 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	KIF2C	Q99661	725 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	C19orf44	Q9H6X5	657 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	PRDM11	Q9NQV5	511 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	DOCK9	Q9BZ29	2069 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	PI4K2B	G5E9Z4	385 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	SPTLC2	O15270	562 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	MFN2	O95140	757 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	MYCL	P12524	364 aa	Predicted RBP	4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	CLCN1	P35523	988 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	PRIM1	P49642	420 aa	Known RBP	4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	TMED2	Q15363	201 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	IQCF2	Q8IXL9	164 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	SIX5	Q8N196	739 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	MYCT1	Q8N699	235 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	MTBP	Q96DY7	904 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	C19orf60	Q96EN9	201 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	SARS2	Q9NP81	518 aa	Known RBP	4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	DSE	Q9UL01	958 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	ADAMTS8	Q9UP79	889 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	ARHGEF10	O15013	1369 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	LRRC53	A6NM62	1247 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	HMGB3	O15347	200 aa	Known RBP	4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	F13A1	P00488	732 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	ACTN1	P12814	892 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	TRIM27	P14373	513 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	GNA11	P29992	359 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	AARS	P49588	968 aa	Known RBP eCLIP	4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	CLK1	P49759	484 aa	Known RBP	4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	EPHB1	P54762	984 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	THOC5	Q13769	683 aa	Known RBP	4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	USF2	Q15853	346 aa	Predicted RBP	4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	ITPRIPL1	Q6GPH6	555 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	FAM47E	Q6ZV65	393 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	COLGALT2	Q8IYK4	626 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	FAM193B	Q96PV7	902 aa	Predicted RBP	4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	ASAP1	Q9ULH1	1129 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	TRPC6	Q9Y210	931 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624		A0A1B0GVL5	298 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624		F8W810	466 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	RNF103	O00237	685 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	TTI1	O43156	1089 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	ATF2	P15336	505 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	ABR	Q12979	859 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	C1orf146	Q5VVC0	180 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	CYP4F22	Q6NT55	531 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	SHQ1	Q6PI26	577 aa	Known RBP	4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	RASSF5	Q8WWW0	418 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	TRIM45	Q9H8W5	580 aa	Predicted RBP	4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	KLHL20	Q9Y2M5	609 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	SAR1B	Q9Y6B6	198 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	ABCA1	O95477	2261 aa		4.37	□□□□□ -1.71
KCNMA1-223	ENST00000604624	AKAP6	Q13023	2319 aa		4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624	SEMA3D	O95025	777 aa		4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624	FOSL1	P15407	271 aa		4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624	SUPT20H	Q8NEM7	779 aa		4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624	CYP4F11	Q9HBI6	524 aa		4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624	CNOT7	Q9UIV1	285 aa	Known RBP	4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624	NSD3	Q9BZ95	1437 aa		4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624	NALCN	Q8IZF0	1738 aa		4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624	XPOT	O43592	962 aa	Known RBP	4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624	MME	P08473	750 aa		4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624	HSD3B1	P14060	373 aa		4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624	SERPINB3	P29508	390 aa		4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624	SOX11	P35716	441 aa		4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624	PSMD7	P51665	324 aa		4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624	CCNI	Q14094	377 aa		4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624	TAF5	Q15542	800 aa		4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624	LRRC36	Q1X8D7	754 aa		4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624	HACE1	Q8IYU2	909 aa		4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624	IZUMO1	Q8IYV9	350 aa		4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624	CYGB	Q8WWM9	190 aa		4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624	TTF2	Q9UNY4	1162 aa	Known RBP	4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624	SLC8A2	Q9UPR5	921 aa		4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624	DMRT2	Q9Y5R5	561 aa		4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624		A0A0G2JND7	137 aa		4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624	POTEC	B2RU33	542 aa		4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624	EXOC3	O60645	756 aa		4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624	SERPIND1	P05546	499 aa		4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624	ZSCAN22	P10073	491 aa	Predicted RBP	4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624	DLAT	P10515	647 aa	Known RBP	4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624	XRCC5	P13010	732 aa	Known RBP	4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624	SLCO1A2	P46721	670 aa		4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624	CCT3	P49368	545 aa	Known RBP	4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624	DYNLT1	P63172	113 aa		4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624	TP53BP2	Q13625	1128 aa		4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624	KLHL12	Q53G59	568 aa		4.36	□□□□□ -1.71
KCNMA1-223	ENST00000604624	NAA35	Q5VZE5	725 aa		4.36	□□□□□ -1.71

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