RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 ODR4Q5SWX8 454 aa26.32■■□□□ 1.8
LSM7-204ENST00000587502 NEK8Q86SG6 692 aa26.32■■□□□ 1.8
LSM7-204ENST00000587502 KIAA0319LQ8IZA0 1049 aa26.32■■□□□ 1.8
LSM7-204ENST00000587502 ZNF710Q8N1W2 664 aa26.32■■□□□ 1.8
LSM7-204ENST00000587502 NECAB1Q8N987 351 aa26.32■■□□□ 1.8
LSM7-204ENST00000587502 UNC45AQ9H3U1 944 aa26.32■■□□□ 1.8
LSM7-204ENST00000587502 ENPP3O14638 875 aa26.31■■□□□ 1.8
LSM7-204ENST00000587502 CHMP2AO43633 222 aa26.31■■□□□ 1.8
LSM7-204ENST00000587502 CD52P31358 61 aa26.31■■□□□ 1.8
LSM7-204ENST00000587502 PAK2Q13177 524 aa26.31■■□□□ 1.8
LSM7-204ENST00000587502 LETM2Q2VYF4 491 aa26.31■■□□□ 1.8
LSM7-204ENST00000587502 PPP4R3AQ6IN85 833 aa26.31■■□□□ 1.8
LSM7-204ENST00000587502 ETNPPLQ8TBG4 499 aa26.31■■□□□ 1.8
LSM7-204ENST00000587502 AGO3Q9H9G7 860 aaKnown RBP26.31■■□□□ 1.8
LSM7-204ENST00000587502 SIP14410 1827 aa26.3■■□□□ 1.8
LSM7-204ENST00000587502 C22orf31O95567 290 aa26.3■■□□□ 1.8
LSM7-204ENST00000587502 OATP04181 439 aa26.3■■□□□ 1.8
LSM7-204ENST00000587502 TMOD1P28289 359 aa26.3■■□□□ 1.8
LSM7-204ENST00000587502 GRB10Q13322 594 aa26.3■■□□□ 1.8
LSM7-204ENST00000587502 MIER3Q7Z3K6 550 aa26.3■■□□□ 1.8
LSM7-204ENST00000587502 MICALL1Q8N3F8 863 aa26.3■■□□□ 1.8
LSM7-204ENST00000587502 ATXN2LQ8WWM7 1075 aaKnown RBP26.3■■□□□ 1.8
LSM7-204ENST00000587502 FAM20AQ96MK3 541 aa26.3■■□□□ 1.8
LSM7-204ENST00000587502 PADI3Q9ULW8 664 aa26.3■■□□□ 1.8
LSM7-204ENST00000587502 KRT2P35908 639 aa26.29■■□□□ 1.8
LSM7-204ENST00000587502 TRMT1LQ7Z2T5 733 aaKnown RBP26.29■■□□□ 1.8
LSM7-204ENST00000587502 METTL13Q8N6R0 699 aa26.29■■□□□ 1.8
LSM7-204ENST00000587502 NSUN7Q8NE18 718 aaKnown RBP26.29■■□□□ 1.8
LSM7-204ENST00000587502 SYMPKQ92797 1274 aaKnown RBP26.29■■□□□ 1.8
LSM7-204ENST00000587502 KIF2CQ99661 725 aa26.29■■□□□ 1.8
LSM7-204ENST00000587502 THEGQ9P2T0 379 aa26.29■■□□□ 1.8
LSM7-204ENST00000587502 LARGE1O95461 756 aa26.28■■□□□ 1.8
LSM7-204ENST00000587502 FDPSP14324 419 aaKnown RBP26.28■■□□□ 1.8
LSM7-204ENST00000587502 RBM25P49756 843 aaKnown RBP26.28■■□□□ 1.8
LSM7-204ENST00000587502 PRKCEQ02156 737 aa26.28■■□□□ 1.8
LSM7-204ENST00000587502 TRIM29Q14134 588 aa26.28■■□□□ 1.8
LSM7-204ENST00000587502 B3GNT9Q6UX72 402 aa26.28■■□□□ 1.8
LSM7-204ENST00000587502 PIK3AP1Q6ZUJ8 805 aa26.28■■□□□ 1.8
LSM7-204ENST00000587502 SUGCTQ9HAC7 445 aa26.28■■□□□ 1.8
LSM7-204ENST00000587502 RNF216Q9NWF9 866 aaPredicted RBP26.28■■□□□ 1.8
LSM7-204ENST00000587502 MTUS1Q9ULD2 1270 aa26.28■■□□□ 1.8
LSM7-204ENST00000587502 LIMCH1Q9UPQ0 1083 aa26.28■■□□□ 1.8
LSM7-204ENST00000587502 COL4A6Q14031 1691 aa26.28■■□□□ 1.8
LSM7-204ENST00000587502 PRRC2BQ5JSZ5 2229 aaKnown RBP26.27■■□□□ 1.8
LSM7-204ENST00000587502 TBX3O15119 743 aa26.27■■□□□ 1.8
LSM7-204ENST00000587502 ZNF862O60290 1169 aa26.27■■□□□ 1.8
LSM7-204ENST00000587502 LPXNO60711 386 aa26.27■■□□□ 1.8
LSM7-204ENST00000587502 CRYBB1P53674 252 aaPredicted RBP26.27■■□□□ 1.8
LSM7-204ENST00000587502 SPRED2Q7Z698 418 aa26.27■■□□□ 1.8
LSM7-204ENST00000587502 FBXO22Q8NEZ5 403 aa26.27■■□□□ 1.8
LSM7-204ENST00000587502 GJA10Q969M2 543 aa26.27■■□□□ 1.8
LSM7-204ENST00000587502 MAP7D2Q96T17 732 aa26.27■■□□□ 1.8
LSM7-204ENST00000587502 GJB4Q9NTQ9 266 aa26.27■■□□□ 1.8
LSM7-204ENST00000587502 GINS2Q9Y248 185 aa26.27■■□□□ 1.8
LSM7-204ENST00000587502 EVPLQ92817 2033 aa26.26■■□□□ 1.79
LSM7-204ENST00000587502 GPR182O15218 404 aa26.26■■□□□ 1.79
LSM7-204ENST00000587502 CCNT1O60563 726 aaKnown RBP26.26■■□□□ 1.79
LSM7-204ENST00000587502 RPS6KA5O75582 802 aa26.26■■□□□ 1.79
LSM7-204ENST00000587502 TJAP1Q5JTD0 557 aa26.26■■□□□ 1.79
LSM7-204ENST00000587502 OXER1Q8TDS5 423 aa26.26■■□□□ 1.79
LSM7-204ENST00000587502 GDPD5Q8WTR4 605 aa26.26■■□□□ 1.79
LSM7-204ENST00000587502 TTC3P53804 2025 aa26.26■■□□□ 1.79
LSM7-204ENST00000587502 WDR81Q562E7 1941 aa26.26■■□□□ 1.79
LSM7-204ENST00000587502 RBAK-RBAKDNI3L0D1 243 aa26.25■■□□□ 1.79
LSM7-204ENST00000587502 SLC37A4O43826 429 aa26.25■■□□□ 1.79
LSM7-204ENST00000587502 MARCH6O60337 910 aa26.25■■□□□ 1.79
LSM7-204ENST00000587502 DKC1O60832 514 aaKnown RBP eCLIP26.25■■□□□ 1.79
LSM7-204ENST00000587502 STAG3L1P0CL83 205 aa26.25■■□□□ 1.79
LSM7-204ENST00000587502 XKR3Q5GH77 459 aa26.25■■□□□ 1.79
LSM7-204ENST00000587502 EFCAB12Q6NXP0 572 aa26.25■■□□□ 1.79
LSM7-204ENST00000587502 FIBCD1Q8N539 461 aa26.25■■□□□ 1.79
LSM7-204ENST00000587502 C17orf80Q9BSJ5 609 aa26.25■■□□□ 1.79
LSM7-204ENST00000587502 COL25A1Q9BXS0 654 aaPredicted RBP26.25■■□□□ 1.79
LSM7-204ENST00000587502 NIFKQ9BYG3 293 aaKnown RBP26.25■■□□□ 1.79
LSM7-204ENST00000587502 KCNMB3Q9NPA1 279 aa26.25■■□□□ 1.79
LSM7-204ENST00000587502 RWDD3Q9Y3V2 267 aa26.25■■□□□ 1.79
LSM7-204ENST00000587502 MRPS5P82675 430 aaKnown RBP26.24■■□□□ 1.79
LSM7-204ENST00000587502 TBC1D8BQ0IIM8 1120 aa26.24■■□□□ 1.79
LSM7-204ENST00000587502 NFX1Q12986 1120 aaKnown RBP26.24■■□□□ 1.79
LSM7-204ENST00000587502 PPP2R5CQ13362 524 aa26.24■■□□□ 1.79
LSM7-204ENST00000587502 SKIV2LQ15477 1246 aaKnown RBP26.24■■□□□ 1.79
LSM7-204ENST00000587502 UGCGQ16739 394 aa26.24■■□□□ 1.79
LSM7-204ENST00000587502 EPC2Q52LR7 807 aa26.24■■□□□ 1.79
LSM7-204ENST00000587502 NPAS4Q8IUM7 802 aa26.24■■□□□ 1.79
LSM7-204ENST00000587502 PRDM6Q9NQX0 595 aa26.24■■□□□ 1.79
LSM7-204ENST00000587502 AKT3Q9Y243 479 aa26.24■■□□□ 1.79
LSM7-204ENST00000587502 GPR32O75388 356 aa26.23■■□□□ 1.79
LSM7-204ENST00000587502 BAG4O95429 457 aaKnown RBP26.23■■□□□ 1.79
LSM7-204ENST00000587502 MMP1P03956 469 aa26.23■■□□□ 1.79
LSM7-204ENST00000587502 PSMC5P62195 406 aa26.23■■□□□ 1.79
LSM7-204ENST00000587502 PTPROQ16827 1216 aa26.23■■□□□ 1.79
LSM7-204ENST00000587502 KIZQ2M2Z5 673 aa26.23■■□□□ 1.79
LSM7-204ENST00000587502 RTN4RL1Q86UN2 441 aaPredicted RBP26.23■■□□□ 1.79
LSM7-204ENST00000587502 TMEM192Q8IY95 271 aa26.23■■□□□ 1.79
LSM7-204ENST00000587502 SLFN12Q8IYM2 578 aa26.23■■□□□ 1.79
LSM7-204ENST00000587502 LINC01599Q8WXQ3 324 aa26.23■■□□□ 1.79
LSM7-204ENST00000587502 ZSCAN31Q96LW9 406 aaPredicted RBP26.23■■□□□ 1.79
LSM7-204ENST00000587502 ERVK-5Q9HDB9 667 aa26.23■■□□□ 1.79
LSM7-204ENST00000587502 NOC2LQ9Y3T9 749 aaKnown RBP26.23■■□□□ 1.79
LSM7-204ENST00000587502 LOXHD1Q8IVV2 1947 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms