RNA–Protein interactions for RNA: ENST00000580980.1

PSMD3-205, Transcript of proteasome 26S subunit, non-ATPase 3, human

TSL 2

Gene PSMD3, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD3-205	ENST00000580980	ZNF710	Q8N1W2	664 aa		13.74	□□□□□ -0.21
PSMD3-205	ENST00000580980	NSUN7	Q8NE18	718 aa	Known RBP	13.74	□□□□□ -0.21
PSMD3-205	ENST00000580980	ETNPPL	Q8TBG4	499 aa		13.74	□□□□□ -0.21
PSMD3-205	ENST00000580980	ARNTL2	Q8WYA1	636 aa		13.74	□□□□□ -0.21
PSMD3-205	ENST00000580980	FAM20A	Q96MK3	541 aa		13.74	□□□□□ -0.21
PSMD3-205	ENST00000580980	TGS1	Q96RS0	853 aa	Known RBP	13.74	□□□□□ -0.21
PSMD3-205	ENST00000580980	UNC45A	Q9H3U1	944 aa		13.74	□□□□□ -0.21
PSMD3-205	ENST00000580980	CERS4	Q9HA82	394 aa		13.74	□□□□□ -0.21
PSMD3-205	ENST00000580980	PTPRS	Q13332	1948 aa		13.73	□□□□□ -0.21
PSMD3-205	ENST00000580980	ENPP3	O14638	875 aa		13.73	□□□□□ -0.21
PSMD3-205	ENST00000580980	TBX3	O15119	743 aa		13.73	□□□□□ -0.21
PSMD3-205	ENST00000580980	C22orf31	O95567	290 aa		13.73	□□□□□ -0.21
PSMD3-205	ENST00000580980	OAT	P04181	439 aa		13.73	□□□□□ -0.21
PSMD3-205	ENST00000580980	KRT2	P35908	639 aa		13.73	□□□□□ -0.21
PSMD3-205	ENST00000580980	ODR4	Q5SWX8	454 aa		13.73	□□□□□ -0.21
PSMD3-205	ENST00000580980	PIK3AP1	Q6ZUJ8	805 aa		13.73	□□□□□ -0.21
PSMD3-205	ENST00000580980	MIER3	Q7Z3K6	550 aa		13.73	□□□□□ -0.21
PSMD3-205	ENST00000580980	TMX3	Q96JJ7	454 aa		13.73	□□□□□ -0.21
PSMD3-205	ENST00000580980	SAMD11	Q96NU1	681 aa		13.73	□□□□□ -0.21
PSMD3-205	ENST00000580980	AGO3	Q9H9G7	860 aa	Known RBP	13.73	□□□□□ -0.21
PSMD3-205	ENST00000580980	LMCD1	Q9NZU5	365 aa		13.73	□□□□□ -0.21
PSMD3-205	ENST00000580980	EPOP	A6NHQ4	379 aa		13.72	□□□□□ -0.21
PSMD3-205	ENST00000580980	RFXAP	O00287	272 aa		13.72	□□□□□ -0.21
PSMD3-205	ENST00000580980	CHMP2A	O43633	222 aa		13.72	□□□□□ -0.21
PSMD3-205	ENST00000580980	ZNF862	O60290	1169 aa		13.72	□□□□□ -0.21
PSMD3-205	ENST00000580980	TMOD1	P28289	359 aa		13.72	□□□□□ -0.21
PSMD3-205	ENST00000580980	CD52	P31358	61 aa		13.72	□□□□□ -0.21
PSMD3-205	ENST00000580980	TMEM62	Q0P6H9	643 aa		13.72	□□□□□ -0.21
PSMD3-205	ENST00000580980	PAK2	Q13177	524 aa		13.72	□□□□□ -0.21
PSMD3-205	ENST00000580980	CUL4A	Q13619	759 aa		13.72	□□□□□ -0.21
PSMD3-205	ENST00000580980	TRIM29	Q14134	588 aa		13.72	□□□□□ -0.21
PSMD3-205	ENST00000580980	OXER1	Q8TDS5	423 aa		13.72	□□□□□ -0.21
PSMD3-205	ENST00000580980	YME1L1	Q96TA2	773 aa		13.72	□□□□□ -0.21
PSMD3-205	ENST00000580980	KCNMB3	Q9NPA1	279 aa		13.72	□□□□□ -0.21
PSMD3-205	ENST00000580980	GJB4	Q9NTQ9	266 aa		13.72	□□□□□ -0.21
PSMD3-205	ENST00000580980	PADI3	Q9ULW8	664 aa		13.72	□□□□□ -0.21
PSMD3-205	ENST00000580980	MTCH2	Q9Y6C9	303 aa		13.72	□□□□□ -0.21
PSMD3-205	ENST00000580980	MICAL3	Q7RTP6	2002 aa		13.72	□□□□□ -0.21
PSMD3-205	ENST00000580980	CHD9	Q3L8U1	2897 aa		13.72	□□□□□ -0.21
PSMD3-205	ENST00000580980	COL4A6	Q14031	1691 aa		13.72	□□□□□ -0.21
PSMD3-205	ENST00000580980	DLL1	O00548	723 aa		13.71	□□□□□ -0.21
PSMD3-205	ENST00000580980	SLC37A4	O43826	429 aa		13.71	□□□□□ -0.21
PSMD3-205	ENST00000580980	CCNT1	O60563	726 aa	Known RBP	13.71	□□□□□ -0.21
PSMD3-205	ENST00000580980	UPP2	O95045	317 aa		13.71	□□□□□ -0.21
PSMD3-205	ENST00000580980	MMP1	P03956	469 aa		13.71	□□□□□ -0.21
PSMD3-205	ENST00000580980	CRYBB1	P53674	252 aa	Predicted RBP	13.71	□□□□□ -0.21
PSMD3-205	ENST00000580980	PRKCE	Q02156	737 aa		13.71	□□□□□ -0.21
PSMD3-205	ENST00000580980	GRB10	Q13322	594 aa		13.71	□□□□□ -0.21
PSMD3-205	ENST00000580980	PPP2R5C	Q13362	524 aa		13.71	□□□□□ -0.21
PSMD3-205	ENST00000580980	BECN1	Q14457	450 aa		13.71	□□□□□ -0.21
PSMD3-205	ENST00000580980	XKR3	Q5GH77	459 aa		13.71	□□□□□ -0.21
PSMD3-205	ENST00000580980	METTL13	Q8N6R0	699 aa		13.71	□□□□□ -0.21
PSMD3-205	ENST00000580980	LINC01465	Q8N7H1	131 aa		13.71	□□□□□ -0.21
PSMD3-205	ENST00000580980	PPM1E	Q8WY54	764 aa		13.71	□□□□□ -0.21
PSMD3-205	ENST00000580980	TNFRSF25	Q93038	417 aa		13.71	□□□□□ -0.21
PSMD3-205	ENST00000580980	GJA10	Q969M2	543 aa		13.71	□□□□□ -0.21
PSMD3-205	ENST00000580980	LLPH	Q9BRT6	129 aa	Known RBP	13.71	□□□□□ -0.21
PSMD3-205	ENST00000580980	NIFK	Q9BYG3	293 aa	Known RBP	13.71	□□□□□ -0.21
PSMD3-205	ENST00000580980	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.71	□□□□□ -0.21
PSMD3-205	ENST00000580980	GPR182	O15218	404 aa		13.7	□□□□□ -0.22
PSMD3-205	ENST00000580980	LPXN	O60711	386 aa		13.7	□□□□□ -0.22
PSMD3-205	ENST00000580980	DKC1	O60832	514 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
PSMD3-205	ENST00000580980	RPS6KA5	O75582	802 aa		13.7	□□□□□ -0.22
PSMD3-205	ENST00000580980	BAG4	O95429	457 aa	Known RBP	13.7	□□□□□ -0.22
PSMD3-205	ENST00000580980	PSMC5	P62195	406 aa		13.7	□□□□□ -0.22
PSMD3-205	ENST00000580980	ST3GAL1	Q11201	340 aa		13.7	□□□□□ -0.22
PSMD3-205	ENST00000580980	TARBP2	Q15633	366 aa	Known RBP	13.7	□□□□□ -0.22
PSMD3-205	ENST00000580980	CCDC85B	Q15834	202 aa	Predicted RBP	13.7	□□□□□ -0.22
PSMD3-205	ENST00000580980	UGCG	Q16739	394 aa		13.7	□□□□□ -0.22
PSMD3-205	ENST00000580980	EFCAB12	Q6NXP0	572 aa		13.7	□□□□□ -0.22
PSMD3-205	ENST00000580980	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.7	□□□□□ -0.22
PSMD3-205	ENST00000580980	SLFN12	Q8IYM2	578 aa		13.7	□□□□□ -0.22
PSMD3-205	ENST00000580980	ATXN2L	Q8WWM7	1075 aa	Known RBP	13.7	□□□□□ -0.22
PSMD3-205	ENST00000580980	INTS4	Q96HW7	963 aa	Known RBP	13.7	□□□□□ -0.22
PSMD3-205	ENST00000580980	MAP7D2	Q96T17	732 aa		13.7	□□□□□ -0.22
PSMD3-205	ENST00000580980	SUGCT	Q9HAC7	445 aa		13.7	□□□□□ -0.22
PSMD3-205	ENST00000580980	RNF216	Q9NWF9	866 aa	Predicted RBP	13.7	□□□□□ -0.22
PSMD3-205	ENST00000580980	VAV3	Q9UKW4	847 aa		13.7	□□□□□ -0.22
PSMD3-205	ENST00000580980	SI	P14410	1827 aa		13.69	□□□□□ -0.22
PSMD3-205	ENST00000580980	MARCH6	O60337	910 aa		13.69	□□□□□ -0.22
PSMD3-205	ENST00000580980	JAK2	O60674	1132 aa		13.69	□□□□□ -0.22
PSMD3-205	ENST00000580980	DTNB	O60941	627 aa		13.69	□□□□□ -0.22
PSMD3-205	ENST00000580980	GPR32	O75388	356 aa		13.69	□□□□□ -0.22
PSMD3-205	ENST00000580980	STAG3L1	P0CL83	205 aa		13.69	□□□□□ -0.22
PSMD3-205	ENST00000580980	CDC42EP1	Q00587	391 aa		13.69	□□□□□ -0.22
PSMD3-205	ENST00000580980	NFX1	Q12986	1120 aa	Known RBP	13.69	□□□□□ -0.22
PSMD3-205	ENST00000580980	NR5A1	Q13285	461 aa		13.69	□□□□□ -0.22
PSMD3-205	ENST00000580980	EARS2	Q5JPH6	523 aa	Known RBP	13.69	□□□□□ -0.22
PSMD3-205	ENST00000580980	KRT40	Q6A162	431 aa		13.69	□□□□□ -0.22
PSMD3-205	ENST00000580980	SPRED2	Q7Z698	418 aa		13.69	□□□□□ -0.22
PSMD3-205	ENST00000580980	RTN4RL1	Q86UN2	441 aa	Predicted RBP	13.69	□□□□□ -0.22
PSMD3-205	ENST00000580980	NPAS4	Q8IUM7	802 aa		13.69	□□□□□ -0.22
PSMD3-205	ENST00000580980	DIS3L2	Q8IYB7	885 aa	Known RBP	13.69	□□□□□ -0.22
PSMD3-205	ENST00000580980	CRIPAK	Q8N1N5	446 aa		13.69	□□□□□ -0.22
PSMD3-205	ENST00000580980	FBXO22	Q8NEZ5	403 aa		13.69	□□□□□ -0.22
PSMD3-205	ENST00000580980	LINC01599	Q8WXQ3	324 aa		13.69	□□□□□ -0.22
PSMD3-205	ENST00000580980	HAS1	Q92839	578 aa		13.69	□□□□□ -0.22
PSMD3-205	ENST00000580980	ZNF689	Q96CS4	500 aa	Predicted RBP	13.69	□□□□□ -0.22
PSMD3-205	ENST00000580980	C17orf80	Q9BSJ5	609 aa		13.69	□□□□□ -0.22
PSMD3-205	ENST00000580980	CDHR5	Q9HBB8	845 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms