RNA–Protein interactions for RNA: ENST00000568605.5

CLK3-224, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-224ENST00000568605 C22orf31O95567 290 aa14.56□□□□□ -0.08
CLK3-224ENST00000568605 ATP4AP20648 1035 aa14.56□□□□□ -0.08
CLK3-224ENST00000568605 KLRC1P26715 233 aa14.56□□□□□ -0.08
CLK3-224ENST00000568605 SMAD3P84022 425 aaKnown RBP14.56□□□□□ -0.08
CLK3-224ENST00000568605 FAM26DQ5JW98 314 aa14.56□□□□□ -0.08
CLK3-224ENST00000568605 RASIP1Q5U651 963 aa14.56□□□□□ -0.08
CLK3-224ENST00000568605 HAUS3Q68CZ6 603 aa14.56□□□□□ -0.08
CLK3-224ENST00000568605 GPR153Q6NV75 609 aa14.56□□□□□ -0.08
CLK3-224ENST00000568605 C16orf59Q7L2K0 433 aa14.56□□□□□ -0.08
CLK3-224ENST00000568605 EXOC8Q8IYI6 725 aa14.56□□□□□ -0.08
CLK3-224ENST00000568605 ZNF710Q8N1W2 664 aa14.56□□□□□ -0.08
CLK3-224ENST00000568605 METTL13Q8N6R0 699 aa14.56□□□□□ -0.08
CLK3-224ENST00000568605 SEPT8Q92599 483 aa14.56□□□□□ -0.08
CLK3-224ENST00000568605 APBB2Q92870 758 aa14.56□□□□□ -0.08
CLK3-224ENST00000568605 SLC9A7Q96T83 725 aa14.56□□□□□ -0.08
CLK3-224ENST00000568605 ZSWIM4Q9H7M6 989 aa14.56□□□□□ -0.08
CLK3-224ENST00000568605 TRPV2Q9Y5S1 764 aa14.56□□□□□ -0.08
CLK3-224ENST00000568605 STK24Q9Y6E0 443 aa14.56□□□□□ -0.08
CLK3-224ENST00000568605 SLC4A7Q9Y6M7 1214 aa14.56□□□□□ -0.08
CLK3-224ENST00000568605 TTC3P53804 2025 aa14.56□□□□□ -0.08
CLK3-224ENST00000568605 MYO9BQ13459 2157 aa14.56□□□□□ -0.08
CLK3-224ENST00000568605 COL4A4P53420 1690 aaPredicted RBP14.55□□□□□ -0.08
CLK3-224ENST00000568605 TCHHQ07283 1943 aa14.55□□□□□ -0.08
CLK3-224ENST00000568605 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.55□□□□□ -0.08
CLK3-224ENST00000568605 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.55□□□□□ -0.08
CLK3-224ENST00000568605 POTEMA6NI47 508 aa14.55□□□□□ -0.08
CLK3-224ENST00000568605 ZBTB42B2RXF5 422 aa14.55□□□□□ -0.08
CLK3-224ENST00000568605 PDIA4P13667 645 aaKnown RBP14.55□□□□□ -0.08
CLK3-224ENST00000568605 CYP4A11Q02928 519 aa14.55□□□□□ -0.08
CLK3-224ENST00000568605 IKBKEQ14164 716 aa14.55□□□□□ -0.08
CLK3-224ENST00000568605 MTERF2Q49AM1 385 aa14.55□□□□□ -0.08
CLK3-224ENST00000568605 TRAF7Q6Q0C0 670 aa14.55□□□□□ -0.08
CLK3-224ENST00000568605 OTUD6AQ7L8S5 288 aa14.55□□□□□ -0.08
CLK3-224ENST00000568605 C4orf19Q8IY42 314 aa14.55□□□□□ -0.08
CLK3-224ENST00000568605 USP38Q8NB14 1042 aa14.55□□□□□ -0.08
CLK3-224ENST00000568605 NIFKQ9BYG3 293 aaKnown RBP14.55□□□□□ -0.08
CLK3-224ENST00000568605 TMEM60Q9H2L4 133 aa14.55□□□□□ -0.08
CLK3-224ENST00000568605 CDY2AQ9Y6F7 541 aa14.55□□□□□ -0.08
CLK3-224ENST00000568605 SQORQ9Y6N5 450 aa14.55□□□□□ -0.08
CLK3-224ENST00000568605 FNDC1Q4ZHG4 1894 aaPredicted RBP14.55□□□□□ -0.08
CLK3-224ENST00000568605 ABHD14A-ACY1A0A1B0GW23 586 aa14.54□□□□□ -0.08
CLK3-224ENST00000568605 BMP15O95972 392 aa14.54□□□□□ -0.08
CLK3-224ENST00000568605 YWHABP31946 246 aaKnown RBP14.54□□□□□ -0.08
CLK3-224ENST00000568605 PRPHP41219 470 aa14.54□□□□□ -0.08
CLK3-224ENST00000568605 DNM2P50570 870 aa14.54□□□□□ -0.08
CLK3-224ENST00000568605 MGAT3Q09327 533 aa14.54□□□□□ -0.08
CLK3-224ENST00000568605 MBTPS1Q14703 1052 aa14.54□□□□□ -0.08
CLK3-224ENST00000568605 PLEKHG4Q58EX7 1191 aa14.54□□□□□ -0.08
CLK3-224ENST00000568605 ODR4Q5SWX8 454 aa14.54□□□□□ -0.08
CLK3-224ENST00000568605 TSHZ1Q6ZSZ6 1077 aa14.54□□□□□ -0.08
CLK3-224ENST00000568605 SLC7A3Q8WY07 619 aa14.54□□□□□ -0.08
CLK3-224ENST00000568605 DYDC2Q96IM9 177 aa14.54□□□□□ -0.08
CLK3-224ENST00000568605 EIF2AK1Q9BQI3 630 aaKnown RBP14.54□□□□□ -0.08
CLK3-224ENST00000568605 IFIH1Q9BYX4 1025 aaKnown RBP14.54□□□□□ -0.08
CLK3-224ENST00000568605 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.54□□□□□ -0.08
CLK3-224ENST00000568605 AKT3Q9Y243 479 aa14.54□□□□□ -0.08
CLK3-224ENST00000568605 PCDHB6Q9Y5E3 794 aa14.54□□□□□ -0.08
CLK3-224ENST00000568605 KDM3AQ9Y4C1 1321 aa14.54□□□□□ -0.08
CLK3-224ENST00000568605 COL4A6Q14031 1691 aa14.53□□□□□ -0.08
CLK3-224ENST00000568605 DDX11L8A8MPP1 907 aa14.53□□□□□ -0.08
CLK3-224ENST00000568605 GAS2O43903 313 aaKnown RBP14.53□□□□□ -0.08
CLK3-224ENST00000568605 SYT1P21579 422 aa14.53□□□□□ -0.08
CLK3-224ENST00000568605 RFC5P40937 340 aa14.53□□□□□ -0.08
CLK3-224ENST00000568605 TECP42680 631 aa14.53□□□□□ -0.08
CLK3-224ENST00000568605 TOB1P50616 345 aaPredicted RBP14.53□□□□□ -0.08
CLK3-224ENST00000568605 FXR2P51116 673 aaKnown RBP eCLIP14.53□□□□□ -0.08
CLK3-224ENST00000568605 TMEM62Q0P6H9 643 aa14.53□□□□□ -0.08
CLK3-224ENST00000568605 PTGDRQ13258 359 aa14.53□□□□□ -0.08
CLK3-224ENST00000568605 NBR1Q14596 966 aa14.53□□□□□ -0.08
CLK3-224ENST00000568605 RAB30Q15771 203 aa14.53□□□□□ -0.08
CLK3-224ENST00000568605 EFCAB12Q6NXP0 572 aa14.53□□□□□ -0.08
CLK3-224ENST00000568605 FAM43BQ6ZT52 329 aaPredicted RBP14.53□□□□□ -0.08
CLK3-224ENST00000568605 TPH2Q8IWU9 490 aa14.53□□□□□ -0.08
CLK3-224ENST00000568605 SCLT1Q96NL6 688 aa14.53□□□□□ -0.08
CLK3-224ENST00000568605 CELF4Q9BZC1 486 aaKnown RBP14.53□□□□□ -0.08
CLK3-224ENST00000568605 TUFT1Q9NNX1 390 aa14.53□□□□□ -0.08
CLK3-224ENST00000568605 CYP26B1Q9NR63 512 aa14.53□□□□□ -0.08
CLK3-224ENST00000568605 FOXD4L1Q9NU39 408 aa14.53□□□□□ -0.08
CLK3-224ENST00000568605 CXXC1Q9P0U4 656 aaPredicted RBP14.53□□□□□ -0.08
CLK3-224ENST00000568605 LAMA3Q16787 3333 aa14.53□□□□□ -0.08
CLK3-224ENST00000568605 TMEM265A0A087WTH1 108 aa14.52□□□□□ -0.09
CLK3-224ENST00000568605 SOX1O00570 391 aaPredicted RBP14.52□□□□□ -0.09
CLK3-224ENST00000568605 STX6O43752 255 aa14.52□□□□□ -0.09
CLK3-224ENST00000568605 CHRNA1P02708 482 aa14.52□□□□□ -0.09
CLK3-224ENST00000568605 GHRP10912 638 aa14.52□□□□□ -0.09
CLK3-224ENST00000568605 ATP2A2P16615 1042 aaKnown RBP14.52□□□□□ -0.09
CLK3-224ENST00000568605 MUTP22033 750 aa14.52□□□□□ -0.09
CLK3-224ENST00000568605 CLCN3P51790 818 aa14.52□□□□□ -0.09
CLK3-224ENST00000568605 POLGP54098 1239 aaPredicted RBP14.52□□□□□ -0.09
CLK3-224ENST00000568605 WDR5P61964 334 aaKnown RBP14.52□□□□□ -0.09
CLK3-224ENST00000568605 CDC42EP1Q00587 391 aa14.52□□□□□ -0.09
CLK3-224ENST00000568605 PAK2Q13177 524 aa14.52□□□□□ -0.09
CLK3-224ENST00000568605 CTTNQ14247 550 aaKnown RBP14.52□□□□□ -0.09
CLK3-224ENST00000568605 TARBP2Q15633 366 aaKnown RBP14.52□□□□□ -0.09
CLK3-224ENST00000568605 FBXO47Q5MNV8 452 aa14.52□□□□□ -0.09
CLK3-224ENST00000568605 ZNF697Q5TEC3 545 aa14.52□□□□□ -0.09
CLK3-224ENST00000568605 PLA2G4FQ68DD2 849 aa14.52□□□□□ -0.09
CLK3-224ENST00000568605 DTHD1Q6ZMT9 781 aa14.52□□□□□ -0.09
CLK3-224ENST00000568605 ANO5Q75V66 913 aa14.52□□□□□ -0.09
CLK3-224ENST00000568605 FERMT3Q86UX7 667 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms