RNA–Protein interactions for RNA: ENST00000563201.1

TNRC6A-210, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 3

Gene TNRC6A, Length 276 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-210ENST00000563201 SAPCD2Q86UD0 394 aa2.44□□□□□ -2.02
TNRC6A-210ENST00000563201 IGDCC3Q8IVU1 814 aa2.44□□□□□ -2.02
TNRC6A-210ENST00000563201 TMEFF1Q8IYR6 380 aa2.44□□□□□ -2.02
TNRC6A-210ENST00000563201 IFNL2Q8IZJ0 200 aa2.44□□□□□ -2.02
TNRC6A-210ENST00000563201 CHST14Q8NCH0 376 aa2.44□□□□□ -2.02
TNRC6A-210ENST00000563201 SLC16A11Q8NCK7 471 aa2.44□□□□□ -2.02
TNRC6A-210ENST00000563201 OR2W6PQ8NHA6 318 aa2.44□□□□□ -2.02
TNRC6A-210ENST00000563201 SMARCC2Q8TAQ2 1214 aa2.44□□□□□ -2.02
TNRC6A-210ENST00000563201 ZCRB1Q8TBF4 217 aaKnown RBP2.44□□□□□ -2.02
TNRC6A-210ENST00000563201 IGDCC4Q8TDY8 1250 aa2.44□□□□□ -2.02
TNRC6A-210ENST00000563201 DDX1Q92499 740 aaKnown RBP2.44□□□□□ -2.02
TNRC6A-210ENST00000563201 KCNJ15Q99712 375 aa2.44□□□□□ -2.02
TNRC6A-210ENST00000563201 C11orf84Q9BUA3 381 aaPredicted RBP2.44□□□□□ -2.02
TNRC6A-210ENST00000563201 LGR4Q9BXB1 951 aa2.44□□□□□ -2.02
TNRC6A-210ENST00000563201 PCIF1Q9H4Z3 704 aa2.44□□□□□ -2.02
TNRC6A-210ENST00000563201 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.44□□□□□ -2.02
TNRC6A-210ENST00000563201 BARX1Q9HBU1 254 aaPredicted RBP2.44□□□□□ -2.02
TNRC6A-210ENST00000563201 TRIM39Q9HCM9 518 aa2.44□□□□□ -2.02
TNRC6A-210ENST00000563201 USP40Q9NVE5 1235 aa2.44□□□□□ -2.02
TNRC6A-210ENST00000563201 SAMD15Q9P1V8 674 aa2.44□□□□□ -2.02
TNRC6A-210ENST00000563201 USP36Q9P275 1121 aaKnown RBP2.44□□□□□ -2.02
TNRC6A-210ENST00000563201 ARHGAP28Q9P2N2 729 aa2.44□□□□□ -2.02
TNRC6A-210ENST00000563201 FTSJ1Q9UET6 329 aa2.44□□□□□ -2.02
TNRC6A-210ENST00000563201 SYNPO2Q9UMS6 1093 aa2.44□□□□□ -2.02
TNRC6A-210ENST00000563201 TBX22Q9Y458 520 aa2.44□□□□□ -2.02
TNRC6A-210ENST00000563201 TRAF6Q9Y4K3 522 aa2.44□□□□□ -2.02
TNRC6A-210ENST00000563201 ASB1Q9Y576 335 aa2.44□□□□□ -2.02
TNRC6A-210ENST00000563201 PCDHA9Q9Y5H5 950 aa2.44□□□□□ -2.02
TNRC6A-210ENST00000563201 MRPL42Q9Y6G3 142 aaKnown RBP2.44□□□□□ -2.02
TNRC6A-210ENST00000563201 NEURL4Q96JN8 1562 aa2.44□□□□□ -2.02
TNRC6A-210ENST00000563201 ARID4BQ4LE39 1312 aaPredicted RBP2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 TTBK1Q5TCY1 1321 aaPredicted RBP2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 CD109Q6YHK3 1445 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 POGZQ7Z3K3 1410 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 CPS1P31327 1500 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 BLACEA4D250 179 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 RBAK-RBAKDNI3L0D1 243 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 ARNTLO00327 626 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 SLC27A2O14975 620 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 PRICKLE3O43900 615 aaPredicted RBP2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 ZEB2O60315 1214 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 BRINP1O60477 761 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 MAFO75444 373 aaPredicted RBP2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 RAPGEF3O95398 923 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 SRGAP2CP0DJJ0 459 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 PYGMP11217 842 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 PTPN1P18031 435 aaKnown RBP2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 SDHBP21912 280 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 HSPA1LP34931 641 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 SARSP49591 514 aaKnown RBP2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 HMGA2P52926 109 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 HTRA3P83110 453 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 DBPQ10586 325 aaPredicted RBP2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 KIR3DS1Q14943 382 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 DHCR24Q15392 516 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 ZNF568Q3ZCX4 644 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 TMEM177Q53S58 311 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 CT47A1Q5JQC4 288 aaPredicted RBP2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 GPR158Q5T848 1215 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 PRAMEF18Q5VWM3 479 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 CDCA2Q69YH5 1023 aaPredicted RBP2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 DDX46Q7L014 1031 aaKnown RBP2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 OVCH1Q7RTY7 1134 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 LRRTM3Q86VH5 581 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 OSTM1Q86WC4 334 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 REXO1L1PQ8IX06 675 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 IGSF22Q8N9C0 903 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 SLC7A14Q8TBB6 771 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 RSAD2Q8WXG1 361 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 LPPQ93052 612 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 ZBTB8AQ96BR9 441 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 PAWRQ96IZ0 340 aaKnown RBP2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 MAML3Q96JK9 1138 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 MENTQ9BUN1 341 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 WNT8AQ9H1J5 351 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 PIF1Q9H611 641 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 CAAP1Q9H8G2 361 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 L2HGDHQ9H9P8 463 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 RIC8BQ9NVN3 520 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 B4GALT6Q9UBX8 382 aa2.43□□□□□ -2.02
TNRC6A-210ENST00000563201 SHPRHQ149N8 1683 aa2.42□□□□□ -2.02
TNRC6A-210ENST00000563201 DIP2CQ9Y2E4 1556 aa2.42□□□□□ -2.02
TNRC6A-210ENST00000563201 C1QTNF3-AMACRE9PGA6 284 aa2.42□□□□□ -2.02
TNRC6A-210ENST00000563201 ZNF561-AS1K7EIQ3 104 aa2.42□□□□□ -2.02
TNRC6A-210ENST00000563201 CBX4O00257 560 aa2.42□□□□□ -2.02
TNRC6A-210ENST00000563201 NKRFO15226 690 aaKnown RBP eCLIP2.42□□□□□ -2.02
TNRC6A-210ENST00000563201 MATN3O15232 486 aa2.42□□□□□ -2.02
TNRC6A-210ENST00000563201 FOXP2O15409 715 aa2.42□□□□□ -2.02
TNRC6A-210ENST00000563201 RAB11FIP3O75154 756 aa2.42□□□□□ -2.02
TNRC6A-210ENST00000563201 ULK1O75385 1050 aa2.42□□□□□ -2.02
TNRC6A-210ENST00000563201 EFEMP2O95967 443 aa2.42□□□□□ -2.02
TNRC6A-210ENST00000563201 FSHBP01225 129 aa2.42□□□□□ -2.02
TNRC6A-210ENST00000563201 LRG1P02750 347 aa2.42□□□□□ -2.02
TNRC6A-210ENST00000563201 CYP1A1P04798 512 aaPredicted RBP2.42□□□□□ -2.02
TNRC6A-210ENST00000563201 CKMP06732 381 aa2.42□□□□□ -2.02
TNRC6A-210ENST00000563201 JMJD7P0C870 316 aa2.42□□□□□ -2.02
TNRC6A-210ENST00000563201 COL6A2P12110 1019 aa2.42□□□□□ -2.02
TNRC6A-210ENST00000563201 ATF2P15336 505 aa2.42□□□□□ -2.02
TNRC6A-210ENST00000563201 KRT15P19012 456 aa2.42□□□□□ -2.02
TNRC6A-210ENST00000563201 IBSPP21815 317 aaPredicted RBP2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms