RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 RPL13P26373 211 aaKnown RBP14.92□□□□□ -0.02
PRPF40B-209ENST00000548825 PON1P27169 355 aa14.92□□□□□ -0.02
PRPF40B-209ENST00000548825 RPGRIP1Q96KN7 1286 aa14.92□□□□□ -0.02
PRPF40B-209ENST00000548825 PDGFDQ9GZP0 370 aaPredicted RBP14.92□□□□□ -0.02
PRPF40B-209ENST00000548825 GRID2IPA4D2P6 1211 aa14.92□□□□□ -0.02
PRPF40B-209ENST00000548825 CCDC169A6NNP5 214 aa14.92□□□□□ -0.02
PRPF40B-209ENST00000548825 SSTR3P32745 418 aaPredicted RBP14.92□□□□□ -0.02
PRPF40B-209ENST00000548825 DLGAP5Q15398 846 aa14.92□□□□□ -0.02
PRPF40B-209ENST00000548825 PRAMEF18Q5VWM3 479 aa14.92□□□□□ -0.02
PRPF40B-209ENST00000548825 LRRC31Q6UY01 552 aa14.92□□□□□ -0.02
PRPF40B-209ENST00000548825 IFT20Q8IY31 132 aa14.92□□□□□ -0.02
PRPF40B-209ENST00000548825 KCTD10Q9H3F6 313 aa14.92□□□□□ -0.02
PRPF40B-209ENST00000548825 TMOD4Q9NZQ9 345 aa14.92□□□□□ -0.02
PRPF40B-209ENST00000548825 IGKV6D-41A0A0C4DH26 115 aa14.92□□□□□ -0.02
PRPF40B-209ENST00000548825 GCOM1H8Y6P7 765 aaPredicted RBP14.92□□□□□ -0.02
PRPF40B-209ENST00000548825 ATMINO43313 823 aaPredicted RBP14.92□□□□□ -0.02
PRPF40B-209ENST00000548825 CALCAP01258 141 aa14.92□□□□□ -0.02
PRPF40B-209ENST00000548825 POLR2MP0CAP2 368 aa14.92□□□□□ -0.02
PRPF40B-209ENST00000548825 GCLMP48507 274 aa14.92□□□□□ -0.02
PRPF40B-209ENST00000548825 CLK2P49760 499 aaKnown RBP14.92□□□□□ -0.02
PRPF40B-209ENST00000548825 HHIPL2Q6UWX4 724 aa14.92□□□□□ -0.02
PRPF40B-209ENST00000548825 RBM46Q8TBY0 533 aaKnown RBP14.92□□□□□ -0.02
PRPF40B-209ENST00000548825 ZIM3Q96PE6 472 aa14.92□□□□□ -0.02
PRPF40B-209ENST00000548825 KIFC3Q9BVG8 833 aa14.92□□□□□ -0.02
PRPF40B-209ENST00000548825 FRMD4BQ9Y2L6 1034 aa14.92□□□□□ -0.02
PRPF40B-209ENST00000548825 SMCHD1A6NHR9 2005 aa14.92□□□□□ -0.02
PRPF40B-209ENST00000548825 H2AFZP0C0S5 128 aa14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 SMARCA1P28370 1054 aa14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 STAT1P42224 750 aa14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 USP11P51784 963 aa14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 GUCY1A3Q02108 690 aa14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 FIGNQ5HY92 759 aa14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 ZFYVE27Q5T4F4 411 aa14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 RINT1Q6NUQ1 792 aa14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 H2AFVQ71UI9 128 aa14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 UBXN6Q9BZV1 441 aa14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 PPANQ9NQ55 473 aaKnown RBP14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 GPRC5CQ9NQ84 441 aa14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 FLOT1O75955 427 aa14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 RPA1P27694 616 aa14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 GJC1P36383 396 aa14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 LIG3P49916 1009 aa14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 TUBB4BP68371 445 aa14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 NNTQ13423 1086 aa14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 ZCWPW2Q504Y3 356 aa14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 PPP1R18Q6NYC8 613 aa14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 C15orf52Q6ZUT6 534 aaKnown RBP14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 WDR18Q9BV38 432 aa14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 ARHGEF10LQ9HCE6 1279 aa14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 KCNMB3Q9NPA1 279 aa14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 DNAJC12Q9UKB3 198 aa14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 SCN7AQ01118 1682 aa14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 AGPSO00116 658 aa14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 GNA14O95837 355 aa14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 TUBBP07437 444 aa14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 DRAP1Q14919 205 aaPredicted RBP14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 CC2D2BQ6DHV5 1058 aa14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 AADACL2Q6P093 401 aa14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 MICALL1Q8N3F8 863 aa14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 ZDHHC15Q96MV8 337 aa14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 CAPS2Q9BXY5 557 aa14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 PARVGQ9HBI0 331 aa14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 ATF5Q9Y2D1 282 aaPredicted RBP14.91□□□□□ -0.02
PRPF40B-209ENST00000548825 TESPA1A2RU30 521 aaPredicted RBP14.9□□□□□ -0.02
PRPF40B-209ENST00000548825 GOLGA6L10A6NI86 522 aa14.9□□□□□ -0.02
PRPF40B-209ENST00000548825 SOX10P56693 466 aa14.9□□□□□ -0.02
PRPF40B-209ENST00000548825 DACT2Q5SW24 774 aa14.9□□□□□ -0.02
PRPF40B-209ENST00000548825 RNF187Q5TA31 235 aaPredicted RBP14.9□□□□□ -0.02
PRPF40B-209ENST00000548825 CCDC25Q86WR0 208 aa14.9□□□□□ -0.02
PRPF40B-209ENST00000548825 ETNPPLQ8TBG4 499 aa14.9□□□□□ -0.02
PRPF40B-209ENST00000548825 DCAF4Q8WV16 495 aa14.9□□□□□ -0.02
PRPF40B-209ENST00000548825 CEP63Q96MT8 703 aa14.9□□□□□ -0.02
PRPF40B-209ENST00000548825 CCPG1Q9ULG6 757 aa14.9□□□□□ -0.02
PRPF40B-209ENST00000548825 NDUFAB1O14561 156 aa14.9□□□□□ -0.02
PRPF40B-209ENST00000548825 EVI5O60447 810 aa14.9□□□□□ -0.02
PRPF40B-209ENST00000548825 TNFAIP3P21580 790 aa14.9□□□□□ -0.02
PRPF40B-209ENST00000548825 C2CD6Q53TS8 623 aa14.9□□□□□ -0.02
PRPF40B-209ENST00000548825 SYT2Q8N9I0 419 aaPredicted RBP14.9□□□□□ -0.02
PRPF40B-209ENST00000548825 ZSWIM2Q8NEG5 633 aa14.9□□□□□ -0.02
PRPF40B-209ENST00000548825 LXNQ9BS40 222 aa14.9□□□□□ -0.02
PRPF40B-209ENST00000548825 TSPYL1Q9H0U9 437 aa14.9□□□□□ -0.02
PRPF40B-209ENST00000548825 CTTNBP2NLQ9P2B4 639 aa14.9□□□□□ -0.02
PRPF40B-209ENST00000548825 NAGPAQ9UK23 515 aa14.9□□□□□ -0.02
PRPF40B-209ENST00000548825 HOXD13P35453 343 aa14.89□□□□□ -0.03
PRPF40B-209ENST00000548825 SSR1P43307 286 aaKnown RBP14.89□□□□□ -0.03
PRPF40B-209ENST00000548825 EPHB4P54760 987 aa14.89□□□□□ -0.03
PRPF40B-209ENST00000548825 IFFO1Q0D2I5 559 aa14.89□□□□□ -0.03
PRPF40B-209ENST00000548825 NAB2Q15742 525 aa14.89□□□□□ -0.03
PRPF40B-209ENST00000548825 GRIPAP1Q4V328 841 aa14.89□□□□□ -0.03
PRPF40B-209ENST00000548825 PPM1KQ8N3J5 372 aa14.89□□□□□ -0.03
PRPF40B-209ENST00000548825 CASKIN2Q8WXE0 1202 aa14.89□□□□□ -0.03
PRPF40B-209ENST00000548825 TRIM51Q9BSJ1 452 aa14.89□□□□□ -0.03
PRPF40B-209ENST00000548825 UBE2TQ9NPD8 197 aaPredicted RBP14.89□□□□□ -0.03
PRPF40B-209ENST00000548825 TAS2R14Q9NYV8 317 aa14.89□□□□□ -0.03
PRPF40B-209ENST00000548825 NYAP2Q9P242 653 aa14.89□□□□□ -0.03
PRPF40B-209ENST00000548825 DAPK3O43293 454 aa14.89□□□□□ -0.03
PRPF40B-209ENST00000548825 FGGP02679 453 aa14.89□□□□□ -0.03
PRPF40B-209ENST00000548825 TNNC1P63316 161 aa14.89□□□□□ -0.03
PRPF40B-209ENST00000548825 CBWD6Q4V339 395 aa14.89□□□□□ -0.03
PRPF40B-209ENST00000548825 CBWD3Q5JTY5 395 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms