RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 ATP2C1P98194 919 aaPredicted RBP20.04■□□□□ 0.8
TSFM-208ENST00000543727 BECN1Q14457 450 aa20.04■□□□□ 0.8
TSFM-208ENST00000543727 TARBP2Q15633 366 aaKnown RBP20.04■□□□□ 0.8
TSFM-208ENST00000543727 HAUS3Q68CZ6 603 aa20.04■□□□□ 0.8
TSFM-208ENST00000543727 RUFY4Q6ZNE9 571 aa20.04■□□□□ 0.8
TSFM-208ENST00000543727 OTUD6AQ7L8S5 288 aa20.04■□□□□ 0.8
TSFM-208ENST00000543727 HERVK_113Q902F9 699 aa20.04■□□□□ 0.8
TSFM-208ENST00000543727 RNPC3Q96LT9 517 aaKnown RBP20.04■□□□□ 0.8
TSFM-208ENST00000543727 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.04■□□□□ 0.82e-7■■□□□ 14.2
TSFM-208ENST00000543727 TUFT1Q9NNX1 390 aa20.04■□□□□ 0.8
TSFM-208ENST00000543727 SEPT9Q9UHD8 586 aaPredicted RBP20.04■□□□□ 0.8
TSFM-208ENST00000543727 KDM3AQ9Y4C1 1321 aa20.03■□□□□ 0.8
TSFM-208ENST00000543727 STBD1O95210 358 aa20.03■□□□□ 0.8
TSFM-208ENST00000543727 XRCC6P12956 609 aaKnown RBP eCLIP20.03■□□□□ 0.8
TSFM-208ENST00000543727 MRPS6P82932 125 aaKnown RBP20.03■□□□□ 0.8
TSFM-208ENST00000543727 TBC1D8BQ0IIM8 1120 aa20.03■□□□□ 0.8
TSFM-208ENST00000543727 NBR1Q14596 966 aa20.03■□□□□ 0.8
TSFM-208ENST00000543727 SHHQ15465 462 aa20.03■□□□□ 0.8
TSFM-208ENST00000543727 RASIP1Q5U651 963 aa20.03■□□□□ 0.8
TSFM-208ENST00000543727 ZNF365Q70YC5 407 aa20.03■□□□□ 0.8
TSFM-208ENST00000543727 C16orf59Q7L2K0 433 aa20.03■□□□□ 0.8
TSFM-208ENST00000543727 USP38Q8NB14 1042 aa20.03■□□□□ 0.8
TSFM-208ENST00000543727 TRAPPC12Q8WVT3 735 aa20.03■□□□□ 0.8
TSFM-208ENST00000543727 DNAJB3Q8WWF6 145 aa20.03■□□□□ 0.8
TSFM-208ENST00000543727 POLR3CQ9BUI4 534 aaPredicted RBP20.03■□□□□ 0.8
TSFM-208ENST00000543727 MTMR6Q9Y217 621 aa20.03■□□□□ 0.8
TSFM-208ENST00000543727 POTEMA6NI47 508 aa20.02■□□□□ 0.8
TSFM-208ENST00000543727 GAS2O43903 313 aaKnown RBP20.02■□□□□ 0.8
TSFM-208ENST00000543727 SLITRK3O94933 977 aa20.02■□□□□ 0.8
TSFM-208ENST00000543727 RPA1P27694 616 aa20.02■□□□□ 0.8
TSFM-208ENST00000543727 YWHABP31946 246 aaKnown RBP20.02■□□□□ 0.8
TSFM-208ENST00000543727 TECP42680 631 aa20.02■□□□□ 0.8
TSFM-208ENST00000543727 CDC42EP1Q00587 391 aa20.02■□□□□ 0.8
TSFM-208ENST00000543727 MGAT3Q09327 533 aa20.02■□□□□ 0.8
TSFM-208ENST00000543727 C9orf50Q5SZB4 431 aa20.02■□□□□ 0.8
TSFM-208ENST00000543727 CNKSR3Q6P9H4 555 aa20.02■□□□□ 0.8
TSFM-208ENST00000543727 DTHD1Q6ZMT9 781 aa20.02■□□□□ 0.8
TSFM-208ENST00000543727 ANO5Q75V66 913 aa20.02■□□□□ 0.8
TSFM-208ENST00000543727 IGSF22Q8N9C0 903 aa20.02■□□□□ 0.8
TSFM-208ENST00000543727 APBB2Q92870 758 aa20.02■□□□□ 0.8
TSFM-208ENST00000543727 DYDC2Q96IM9 177 aa20.02■□□□□ 0.8
TSFM-208ENST00000543727 FOXD4L1Q9NU39 408 aa20.02■□□□□ 0.8
TSFM-208ENST00000543727 DDX11L8A8MPP1 907 aa20.01■□□□□ 0.79
TSFM-208ENST00000543727 NBNO60934 754 aa20.01■□□□□ 0.79
TSFM-208ENST00000543727 RESTQ13127 1097 aa20.01■□□□□ 0.79
TSFM-208ENST00000543727 DEFB128Q7Z7B8 93 aa20.01■□□□□ 0.79
TSFM-208ENST00000543727 LINC01465Q8N7H1 131 aa20.01■□□□□ 0.79
TSFM-208ENST00000543727 VWCEQ96DN2 955 aa20.01■□□□□ 0.79
TSFM-208ENST00000543727 MAP7D2Q96T17 732 aa20.01■□□□□ 0.79
TSFM-208ENST00000543727 FTOQ9C0B1 505 aaKnown RBP eCLIP20.01■□□□□ 0.79
TSFM-208ENST00000543727 CYP26B1Q9NR63 512 aa20.01■□□□□ 0.79
TSFM-208ENST00000543727 ANKEF1Q9NU02 776 aa20.01■□□□□ 0.79
TSFM-208ENST00000543727 RGL1Q9NZL6 768 aa20.01■□□□□ 0.79
TSFM-208ENST00000543727 PCDH10Q9P2E7 1040 aa20.01■□□□□ 0.79
TSFM-208ENST00000543727 TRPV2Q9Y5S1 764 aa20.01■□□□□ 0.79
TSFM-208ENST00000543727 ABHD14A-ACY1A0A1B0GW23 586 aa20■□□□□ 0.79
TSFM-208ENST00000543727 ACRP10323 421 aa20■□□□□ 0.79
TSFM-208ENST00000543727 RFC5P40937 340 aa20■□□□□ 0.79
TSFM-208ENST00000543727 DNM2P50570 870 aa20■□□□□ 0.79
TSFM-208ENST00000543727 CYP4A11Q02928 519 aa20■□□□□ 0.79
TSFM-208ENST00000543727 MBTPS1Q14703 1052 aa20■□□□□ 0.79
TSFM-208ENST00000543727 PLEKHG4Q58EX7 1191 aa20■□□□□ 0.79
TSFM-208ENST00000543727 FERMT3Q86UX7 667 aa20■□□□□ 0.79
TSFM-208ENST00000543727 TPH2Q8IWU9 490 aa20■□□□□ 0.79
TSFM-208ENST00000543727 KIAA0319LQ8IZA0 1049 aa20■□□□□ 0.79
TSFM-208ENST00000543727 KCTD17Q8N5Z5 321 aa20■□□□□ 0.79
TSFM-208ENST00000543727 SLC7A3Q8WY07 619 aa20■□□□□ 0.79
TSFM-208ENST00000543727 CEP89Q96ST8 783 aa20■□□□□ 0.79
TSFM-208ENST00000543727 FAM49AQ9H0Q0 323 aaPredicted RBP20■□□□□ 0.79
TSFM-208ENST00000543727 LRWD1Q9UFC0 647 aa20■□□□□ 0.79
TSFM-208ENST00000543727 CDY2AQ9Y6F7 541 aa20■□□□□ 0.79
TSFM-208ENST00000543727 MORC2Q9Y6X9 1032 aaPredicted RBP20■□□□□ 0.79
TSFM-208ENST00000543727 GBF1Q92538 1859 aa20■□□□□ 0.79
TSFM-208ENST00000543727 IGKV6-21A0A0C4DH24 114 aa19.99■□□□□ 0.79
TSFM-208ENST00000543727 SLC26A4O43511 780 aa19.99■□□□□ 0.79
TSFM-208ENST00000543727 CHRNA1P02708 482 aa19.99■□□□□ 0.79
TSFM-208ENST00000543727 CTSHP09668 335 aa19.99■□□□□ 0.79
TSFM-208ENST00000543727 CTTNQ14247 550 aaKnown RBP19.99■□□□□ 0.79
TSFM-208ENST00000543727 GPNMBQ14956 572 aa19.99■□□□□ 0.79
TSFM-208ENST00000543727 MTERF2Q49AM1 385 aa19.99■□□□□ 0.79
TSFM-208ENST00000543727 ODR4Q5SWX8 454 aa19.99■□□□□ 0.79
TSFM-208ENST00000543727 GPR153Q6NV75 609 aa19.99■□□□□ 0.79
TSFM-208ENST00000543727 EFCAB12Q6NXP0 572 aa19.99■□□□□ 0.79
TSFM-208ENST00000543727 TSHZ1Q6ZSZ6 1077 aa19.99■□□□□ 0.79
TSFM-208ENST00000543727 TRMT1LQ7Z2T5 733 aaKnown RBP19.99■□□□□ 0.79
TSFM-208ENST00000543727 METTL13Q8N6R0 699 aa19.99■□□□□ 0.79
TSFM-208ENST00000543727 SEPT8Q92599 483 aa19.99■□□□□ 0.79
TSFM-208ENST00000543727 AK8Q96MA6 479 aa19.99■□□□□ 0.79
TSFM-208ENST00000543727 CELF4Q9BZC1 486 aaKnown RBP19.99■□□□□ 0.79
TSFM-208ENST00000543727 WRAP73Q9P2S5 460 aaPredicted RBP19.99■□□□□ 0.79
TSFM-208ENST00000543727 PTPRSQ13332 1948 aa19.99■□□□□ 0.79
TSFM-208ENST00000543727 MAFO75444 373 aaPredicted RBP19.98■□□□□ 0.79
TSFM-208ENST00000543727 SPATA31C1P0DKV0 1188 aa19.98■□□□□ 0.79
TSFM-208ENST00000543727 SMAD3P84022 425 aaKnown RBP19.98■□□□□ 0.79
TSFM-208ENST00000543727 IKBKEQ14164 716 aa19.98■□□□□ 0.79
TSFM-208ENST00000543727 OTOP2Q7RTS6 562 aa19.98■□□□□ 0.79
TSFM-208ENST00000543727 CATSPER3Q86XQ3 398 aa19.98■□□□□ 0.79
TSFM-208ENST00000543727 PHOSPHO2Q8TCD6 241 aa19.98■□□□□ 0.79
TSFM-208ENST00000543727 CEP170P1Q96L14 293 aa19.98■□□□□ 0.79
TSFM-208ENST00000543727 NACC1Q96RE7 527 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms