RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 RELL1Q8IUW5 271 aa13.75□□□□□ -0.21
DDX55-206ENST00000539934 ESX1Q8N693 406 aa13.75□□□□□ -0.21
DDX55-206ENST00000539934 ACMSDQ8TDX5 336 aa13.75□□□□□ -0.21
DDX55-206ENST00000539934 WASF1Q92558 559 aa13.75□□□□□ -0.21
DDX55-206ENST00000539934 DNAI1Q9UI46 699 aa13.75□□□□□ -0.21
DDX55-206ENST00000539934 FAM169AQ9Y6X4 670 aa13.75□□□□□ -0.21
DDX55-206ENST00000539934 PRUNE2Q8WUY3 3088 aa13.75□□□□□ -0.21
DDX55-206ENST00000539934 NDUFB5O43674 189 aa13.75□□□□□ -0.21
DDX55-206ENST00000539934 MGEA5O60502 916 aa13.75□□□□□ -0.21
DDX55-206ENST00000539934 B3GALNT1O75752 331 aa13.75□□□□□ -0.21
DDX55-206ENST00000539934 GNL2Q13823 731 aaKnown RBP13.75□□□□□ -0.21
DDX55-206ENST00000539934 KRT40Q6A162 431 aa13.75□□□□□ -0.21
DDX55-206ENST00000539934 OTUD5Q96G74 571 aa13.75□□□□□ -0.21
DDX55-206ENST00000539934 FTOQ9C0B1 505 aaKnown RBP eCLIP13.75□□□□□ -0.21
DDX55-206ENST00000539934 SLC45A1Q9Y2W3 748 aa13.75□□□□□ -0.21
DDX55-206ENST00000539934 GNAT1P11488 350 aa13.74□□□□□ -0.21
DDX55-206ENST00000539934 HOXD12P35452 270 aa13.74□□□□□ -0.21
DDX55-206ENST00000539934 TAF1CQ15572 869 aaPredicted RBP13.74□□□□□ -0.21
DDX55-206ENST00000539934 CEP57Q86XR8 500 aa13.74□□□□□ -0.21
DDX55-206ENST00000539934 WDR75Q8IWA0 830 aaKnown RBP13.74□□□□□ -0.21
DDX55-206ENST00000539934 DPF3Q92784 378 aa13.74□□□□□ -0.21
DDX55-206ENST00000539934 MKNK2Q9HBH9 465 aa13.74□□□□□ -0.21
DDX55-206ENST00000539934 KLC4Q9NSK0 619 aa13.74□□□□□ -0.21
DDX55-206ENST00000539934 SAP30BPQ9UHR5 308 aaKnown RBP13.74□□□□□ -0.21
DDX55-206ENST00000539934 TMCO1Q9UM00 188 aa13.74□□□□□ -0.21
DDX55-206ENST00000539934 GAKO14976 1311 aa13.74□□□□□ -0.21
DDX55-206ENST00000539934 NEMFO60524 1076 aa13.74□□□□□ -0.21
DDX55-206ENST00000539934 SASH3O75995 380 aa13.74□□□□□ -0.21
DDX55-206ENST00000539934 CYP1A2P05177 515 aa13.74□□□□□ -0.21
DDX55-206ENST00000539934 CALM1P0DP23 149 aa13.74□□□□□ -0.21
DDX55-206ENST00000539934 CALM2P0DP24 149 aa13.74□□□□□ -0.21
DDX55-206ENST00000539934 CALM3P0DP25 149 aa13.74□□□□□ -0.21
DDX55-206ENST00000539934 SMTNP53814 917 aa13.74□□□□□ -0.21
DDX55-206ENST00000539934 CAMK2BQ13554 666 aa13.74□□□□□ -0.21
DDX55-206ENST00000539934 MAP3K11Q16584 847 aa13.74□□□□□ -0.21
DDX55-206ENST00000539934 KAZNQ674X7 775 aa13.74□□□□□ -0.21
DDX55-206ENST00000539934 KANK3Q6NY19 840 aa13.74□□□□□ -0.21
DDX55-206ENST00000539934 CMTR1Q8N1G2 835 aaKnown RBP13.74□□□□□ -0.21
DDX55-206ENST00000539934 BRI3BPQ8WY22 251 aa13.74□□□□□ -0.21
DDX55-206ENST00000539934 DYNLL2Q96FJ2 89 aa13.74□□□□□ -0.21
DDX55-206ENST00000539934 PGBD1Q96JS3 809 aa13.74□□□□□ -0.21
DDX55-206ENST00000539934 YIPF3Q9GZM5 350 aa13.74□□□□□ -0.21
DDX55-206ENST00000539934 RCOR1Q9UKL0 485 aa13.74□□□□□ -0.21
DDX55-206ENST00000539934 LUC7L2Q9Y383 392 aaKnown RBP13.74□□□□□ -0.21
DDX55-206ENST00000539934 FOCADQ5VW36 1801 aa13.73□□□□□ -0.21
DDX55-206ENST00000539934 ROBO3Q96MS0 1386 aa13.73□□□□□ -0.21
DDX55-206ENST00000539934 SPDYE2BA6NHP3 402 aa13.73□□□□□ -0.21
DDX55-206ENST00000539934 DLL1O00548 723 aa13.73□□□□□ -0.21
DDX55-206ENST00000539934 NMT2O60551 498 aa13.73□□□□□ -0.21
DDX55-206ENST00000539934 GFPT2O94808 682 aa13.73□□□□□ -0.21
DDX55-206ENST00000539934 DEXIO95424 95 aa13.73□□□□□ -0.21
DDX55-206ENST00000539934 SPDYE6P0CI01 402 aa13.73□□□□□ -0.21
DDX55-206ENST00000539934 CCDC166P0CW27 439 aa13.73□□□□□ -0.21
DDX55-206ENST00000539934 IREB2P48200 963 aaKnown RBP13.73□□□□□ -0.21
DDX55-206ENST00000539934 NT5C2P49902 561 aa13.73□□□□□ -0.21
DDX55-206ENST00000539934 SEPT2Q15019 361 aa13.73□□□□□ -0.21
DDX55-206ENST00000539934 MTFR1Q15390 333 aa13.73□□□□□ -0.21
DDX55-206ENST00000539934 ERCC6LQ2NKX8 1250 aa13.73□□□□□ -0.21
DDX55-206ENST00000539934 CFAP58Q5T655 872 aa13.73□□□□□ -0.21
DDX55-206ENST00000539934 MS4A4AQ96JQ5 239 aa13.73□□□□□ -0.21
DDX55-206ENST00000539934 FUT8Q9BYC5 575 aa13.73□□□□□ -0.21
DDX55-206ENST00000539934 XPO7Q9UIA9 1087 aaKnown RBP13.73□□□□□ -0.21
DDX55-206ENST00000539934 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.73□□□□□ -0.21
DDX55-206ENST00000539934 CDH23Q9H251 3354 aa13.72□□□□□ -0.21
DDX55-206ENST00000539934 KIF28PB7ZC32 967 aa13.72□□□□□ -0.21
DDX55-206ENST00000539934 NDUFAB1O14561 156 aa13.72□□□□□ -0.21
DDX55-206ENST00000539934 TMCC1O94876 653 aa13.72□□□□□ -0.21
DDX55-206ENST00000539934 RRM1P23921 792 aa13.72□□□□□ -0.21
DDX55-206ENST00000539934 TFAP4Q01664 338 aa13.72□□□□□ -0.21
DDX55-206ENST00000539934 AKAP17AQ02040 695 aaKnown RBP13.72□□□□□ -0.21
DDX55-206ENST00000539934 SUPT20HL1Q3ZLR7 823 aa13.72□□□□□ -0.21
DDX55-206ENST00000539934 ARHGAP29Q52LW3 1261 aa13.72□□□□□ -0.21
DDX55-206ENST00000539934 LILRB2Q8N423 598 aa13.72□□□□□ -0.21
DDX55-206ENST00000539934 CRACR2BQ8N4Y2 399 aaPredicted RBP13.72□□□□□ -0.21
DDX55-206ENST00000539934 EPSTI1Q96J88 318 aa13.72□□□□□ -0.21
DDX55-206ENST00000539934 GALNT8Q9NY28 637 aa13.72□□□□□ -0.21
DDX55-206ENST00000539934 ATXN10Q9UBB4 475 aa13.72□□□□□ -0.21
DDX55-206ENST00000539934 HESX1Q9UBX0 185 aa13.72□□□□□ -0.21
DDX55-206ENST00000539934 TTF2Q9UNY4 1162 aaKnown RBP13.72□□□□□ -0.21
DDX55-206ENST00000539934 NOSIPQ9Y314 301 aaKnown RBP13.72□□□□□ -0.21
DDX55-206ENST00000539934 RBBP6Q7Z6E9 1792 aaKnown RBP13.72□□□□□ -0.21
DDX55-206ENST00000539934 FLT1P17948 1338 aa13.72□□□□□ -0.21
DDX55-206ENST00000539934 DDX60LQ5H9U9 1706 aaKnown RBP13.72□□□□□ -0.21
DDX55-206ENST00000539934 CCL15-CCL14A0A0B4J2E2 113 aa13.72□□□□□ -0.21
DDX55-206ENST00000539934 TCP10L2B9ZVM9 353 aa13.72□□□□□ -0.21
DDX55-206ENST00000539934 DDAH1O94760 285 aa13.72□□□□□ -0.21
DDX55-206ENST00000539934 LDHAP00338 332 aaKnown RBP13.72□□□□□ -0.21
DDX55-206ENST00000539934 CCL15Q16663 113 aa13.72□□□□□ -0.21
DDX55-206ENST00000539934 TPD52L1Q16890 204 aaPredicted RBP13.72□□□□□ -0.21
DDX55-206ENST00000539934 ADALQ6DHV7 355 aa13.72□□□□□ -0.21
DDX55-206ENST00000539934 BZW1Q7L1Q6 419 aaKnown RBP13.72□□□□□ -0.21
DDX55-206ENST00000539934 C11orf74Q86VG3 221 aa13.72□□□□□ -0.21
DDX55-206ENST00000539934 ZNF444Q8N0Y2 327 aaPredicted RBP13.72□□□□□ -0.21
DDX55-206ENST00000539934 SNX27Q96L92 541 aa13.72□□□□□ -0.21
DDX55-206ENST00000539934 RPS6KC1Q96S38 1066 aa13.72□□□□□ -0.21
DDX55-206ENST00000539934 NUP62CLQ9H1M0 184 aa13.72□□□□□ -0.21
DDX55-206ENST00000539934 TDRD3Q9H7E2 651 aaKnown RBP13.72□□□□□ -0.21
DDX55-206ENST00000539934 ZNF287Q9HBT7 754 aa13.72□□□□□ -0.21
DDX55-206ENST00000539934 KIAA1522Q9P206 1035 aaPredicted RBP13.72□□□□□ -0.21
DDX55-206ENST00000539934 DAGLAQ9Y4D2 1042 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms