RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 CCDC155Q8N6L0 562 aa20.06■□□□□ 0.8
DDX55-204ENST00000536079 COL1A2P08123 1366 aa20.06■□□□□ 0.8
DDX55-204ENST00000536079 RSPH10B2B2RC85 870 aa20.05■□□□□ 0.8
DDX55-204ENST00000536079 RSPH10BP0C881 870 aa20.05■□□□□ 0.8
DDX55-204ENST00000536079 CDC25AP30304 524 aa20.05■□□□□ 0.8
DDX55-204ENST00000536079 MKRN4PQ13434 485 aaPredicted RBP20.05■□□□□ 0.8
DDX55-204ENST00000536079 SF3A1Q15459 793 aaKnown RBP20.05■□□□□ 0.8
DDX55-204ENST00000536079 FAM26DQ5JW98 314 aa20.05■□□□□ 0.8
DDX55-204ENST00000536079 TAF2Q6P1X5 1199 aa20.05■□□□□ 0.8
DDX55-204ENST00000536079 RPAINQ86UA6 219 aa20.05■□□□□ 0.8
DDX55-204ENST00000536079 C4orf19Q8IY42 314 aa20.05■□□□□ 0.8
DDX55-204ENST00000536079 LRRC71Q8N4P6 559 aa20.05■□□□□ 0.8
DDX55-204ENST00000536079 LINC01465Q8N7H1 131 aa20.05■□□□□ 0.8
DDX55-204ENST00000536079 SMIM35A0A1B0GVV1 85 aa20.04■□□□□ 0.8
DDX55-204ENST00000536079 PRPHP41219 470 aa20.04■□□□□ 0.8
DDX55-204ENST00000536079 CLCN3P51790 818 aa20.04■□□□□ 0.8
DDX55-204ENST00000536079 GRIN1Q05586 938 aa20.04■□□□□ 0.8
DDX55-204ENST00000536079 DRP2Q13474 957 aa20.04■□□□□ 0.8
DDX55-204ENST00000536079 PTPAQ15257 358 aa20.04■□□□□ 0.8
DDX55-204ENST00000536079 CATSPER3Q86XQ3 398 aa20.04■□□□□ 0.8
DDX55-204ENST00000536079 TDHQ8IZJ6 230 aa20.04■□□□□ 0.8
DDX55-204ENST00000536079 IGSF22Q8N9C0 903 aa20.04■□□□□ 0.8
DDX55-204ENST00000536079 TNPO1Q92973 898 aaKnown RBP20.04■□□□□ 0.8
DDX55-204ENST00000536079 ZSWIM4Q9H7M6 989 aa20.04■□□□□ 0.8
DDX55-204ENST00000536079 CDHR5Q9HBB8 845 aa20.04■□□□□ 0.8
DDX55-204ENST00000536079 ZDHHC9Q9Y397 364 aa20.04■□□□□ 0.8
DDX55-204ENST00000536079 MYH9P35579 1960 aaKnown RBP20.04■□□□□ 0.8
DDX55-204ENST00000536079 LAMA2P24043 3122 aaKnown RBP20.03■□□□□ 0.8
DDX55-204ENST00000536079 TANC1Q9C0D5 1861 aa20.03■□□□□ 0.8
DDX55-204ENST00000536079 CXCL10P02778 98 aa20.03■□□□□ 0.8
DDX55-204ENST00000536079 YWHABP31946 246 aaKnown RBP20.03■□□□□ 0.8
DDX55-204ENST00000536079 HABP4Q5JVS0 413 aaKnown RBP20.03■□□□□ 0.8
DDX55-204ENST00000536079 PIGOQ8TEQ8 1089 aa20.03■□□□□ 0.8
DDX55-204ENST00000536079 USP28Q96RU2 1077 aa20.03■□□□□ 0.8
DDX55-204ENST00000536079 PPP1R16BQ96T49 567 aa20.03■□□□□ 0.8
DDX55-204ENST00000536079 MMTAG2Q9BU76 263 aaKnown RBP20.03■□□□□ 0.8
DDX55-204ENST00000536079 CXXC1Q9P0U4 656 aaPredicted RBP20.03■□□□□ 0.8
DDX55-204ENST00000536079 CDY2AQ9Y6F7 541 aa20.03■□□□□ 0.8
DDX55-204ENST00000536079 KAT6AQ92794 2004 aa20.02■□□□□ 0.8
DDX55-204ENST00000536079 LAD1O00515 517 aa20.02■□□□□ 0.8
DDX55-204ENST00000536079 LYPLA2O95372 231 aa20.02■□□□□ 0.8
DDX55-204ENST00000536079 ZSCAN22P10073 491 aaPredicted RBP20.02■□□□□ 0.8
DDX55-204ENST00000536079 RFC2P35250 354 aa20.02■□□□□ 0.8
DDX55-204ENST00000536079 MRPS6P82932 125 aaKnown RBP20.02■□□□□ 0.8
DDX55-204ENST00000536079 CEBPZQ03701 1054 aaKnown RBP20.02■□□□□ 0.8
DDX55-204ENST00000536079 EFCAB12Q6NXP0 572 aa20.02■□□□□ 0.8
DDX55-204ENST00000536079 DTHD1Q6ZMT9 781 aa20.02■□□□□ 0.8
DDX55-204ENST00000536079 OTOP2Q7RTS6 562 aa20.02■□□□□ 0.8
DDX55-204ENST00000536079 METTL13Q8N6R0 699 aa20.02■□□□□ 0.8
DDX55-204ENST00000536079 POLR3CQ9BUI4 534 aaPredicted RBP20.02■□□□□ 0.8
DDX55-204ENST00000536079 CYP26B1Q9NR63 512 aa20.02■□□□□ 0.8
DDX55-204ENST00000536079 LRWD1Q9UFC0 647 aa20.02■□□□□ 0.8
DDX55-204ENST00000536079 CEP131Q9UPN4 1083 aa20.02■□□□□ 0.8
DDX55-204ENST00000536079 TET1Q8NFU7 2136 aa20.02■□□□□ 0.79
DDX55-204ENST00000536079 IGKV6-21A0A0C4DH24 114 aa20.01■□□□□ 0.79
DDX55-204ENST00000536079 VWA3AA6NCI4 1184 aa20.01■□□□□ 0.79
DDX55-204ENST00000536079 SOX1O00570 391 aaPredicted RBP20.01■□□□□ 0.79
DDX55-204ENST00000536079 CAND2O75155 1236 aa20.01■□□□□ 0.79
DDX55-204ENST00000536079 FGBP02675 491 aa20.01■□□□□ 0.79
DDX55-204ENST00000536079 VTNP04004 478 aa20.01■□□□□ 0.79
DDX55-204ENST00000536079 PDIA5Q14554 519 aa20.01■□□□□ 0.79
DDX55-204ENST00000536079 TMEM266Q2M3C6 531 aa20.01■□□□□ 0.79
DDX55-204ENST00000536079 FOXD4L6Q3SYB3 417 aaPredicted RBP20.01■□□□□ 0.79
DDX55-204ENST00000536079 RASIP1Q5U651 963 aa20.01■□□□□ 0.79
DDX55-204ENST00000536079 FAM109BQ6ICB4 259 aaPredicted RBP20.01■□□□□ 0.79
DDX55-204ENST00000536079 POTEGQ6S5H5 508 aa20.01■□□□□ 0.79
DDX55-204ENST00000536079 FOXD4L3Q6VB84 417 aaPredicted RBP20.01■□□□□ 0.79
DDX55-204ENST00000536079 NEK9Q8TD19 979 aa20.01■□□□□ 0.79
DDX55-204ENST00000536079 ZNF668Q96K58 619 aaPredicted RBP20.01■□□□□ 0.79
DDX55-204ENST00000536079 CEP170P1Q96L14 293 aa20.01■□□□□ 0.79
DDX55-204ENST00000536079 ZSCAN16Q9H4T2 348 aaPredicted RBP20.01■□□□□ 0.79
DDX55-204ENST00000536079 SUGCTQ9HAC7 445 aa20.01■□□□□ 0.79
DDX55-204ENST00000536079 TUFT1Q9NNX1 390 aa20.01■□□□□ 0.79
DDX55-204ENST00000536079 BMP2KQ9NSY1 1161 aaPredicted RBP20.01■□□□□ 0.79
DDX55-204ENST00000536079 LAMA3Q16787 3333 aa20.01■□□□□ 0.79
DDX55-204ENST00000536079 MAFO75444 373 aaPredicted RBP20■□□□□ 0.79
DDX55-204ENST00000536079 F13A1P00488 732 aa20■□□□□ 0.79
DDX55-204ENST00000536079 GHRP10912 638 aa20■□□□□ 0.79
DDX55-204ENST00000536079 RPA1P27694 616 aa20■□□□□ 0.79
DDX55-204ENST00000536079 TBC1D8BQ0IIM8 1120 aa20■□□□□ 0.79
DDX55-204ENST00000536079 LPIN1Q14693 890 aa20■□□□□ 0.79
DDX55-204ENST00000536079 XKR9Q5GH70 373 aa20■□□□□ 0.79
DDX55-204ENST00000536079 RPUSD2Q8IZ73 545 aaKnown RBP20■□□□□ 0.79
DDX55-204ENST00000536079 HERVK_113Q902F9 699 aa20■□□□□ 0.79
DDX55-204ENST00000536079 CHAMP1Q96JM3 812 aa20■□□□□ 0.79
DDX55-204ENST00000536079 RNPC3Q96LT9 517 aaKnown RBP20■□□□□ 0.79
DDX55-204ENST00000536079 AGO3Q9H9G7 860 aaKnown RBP20■□□□□ 0.79
DDX55-204ENST00000536079 TRIOBPQ9H2D6 2365 aa20■□□□□ 0.79
DDX55-204ENST00000536079 MAGEB2O15479 319 aa19.99■□□□□ 0.79
DDX55-204ENST00000536079 DKC1O60832 514 aaKnown RBP eCLIP19.99■□□□□ 0.79
DDX55-204ENST00000536079 GPR32O75388 356 aa19.99■□□□□ 0.79
DDX55-204ENST00000536079 MARCKSP29966 332 aaPredicted RBP19.99■□□□□ 0.79
DDX55-204ENST00000536079 CCT6AP40227 531 aaKnown RBP19.99■□□□□ 0.79
DDX55-204ENST00000536079 BECN1Q14457 450 aa19.99■□□□□ 0.79
DDX55-204ENST00000536079 ARL6IP4Q66PJ3 421 aaKnown RBP19.99■□□□□ 0.79
DDX55-204ENST00000536079 PSRC1Q6PGN9 363 aaPredicted RBP19.99■□□□□ 0.79
DDX55-204ENST00000536079 NME8Q8N427 588 aa19.99■□□□□ 0.79
DDX55-204ENST00000536079 DBF4BQ8NFT6 615 aa19.99■□□□□ 0.79
DDX55-204ENST00000536079 TMEM40Q8WWA1 233 aa19.99■□□□□ 0.79
DDX55-204ENST00000536079 CELF4Q9BZC1 486 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms